Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2091
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 27 0.17
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 27 0.17
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 27 0.17
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 25 0.52
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.52
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.52
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.52
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 22 6.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.4
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 21 8.5
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 27.1 bits (57), Expect = 0.17
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 511 WIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPPQRGTWLPS 389
WI PR R P P+P + P+ RPPQ + P+
Sbjct: 137 WISIQEQIPRFRYIGPPTPFPRFIPPNAYRFRPPQNPRFGPT 178
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 27.1 bits (57), Expect = 0.17
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 511 WIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPPQRGTWLPS 389
WI PR R P P+P + P+ RPPQ + P+
Sbjct: 137 WISIQEQIPRFRYIGPPTPFPRFIPPNAYRFRPPQNPRFGPT 178
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 27.1 bits (57), Expect = 0.17
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 511 WIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPPQRGTWLPS 389
WI PR R P P+P + P+ RPPQ + P+
Sbjct: 375 WISIQEQIPRFRYIGPPTPFPRFIPPNAYRFRPPQNPRFGPT 416
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.52
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 511 WIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPP 413
WI PR R P P+P + P+ RPP
Sbjct: 138 WISVQEQVPRFRCIGPPTPFPRFIPPNAYRFRPP 171
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.52
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 511 WIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPP 413
WI PR R P P+P + P+ RPP
Sbjct: 143 WISMQEQIPRFRYIGPPTPFPRFIPPNAYRLRPP 176
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.52
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 511 WIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPP 413
WI PR R P P+P + P+ RPP
Sbjct: 143 WISMQEQIPRFRYIGPPTPFPRFIPPNAYRLRPP 176
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.4 bits (53), Expect = 0.52
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 511 WIRRTRHAPR-RAPSQPQPWPAYEQPHRISCRPP 413
WI PR R P P+P + P+ RPP
Sbjct: 371 WISMQEQIPRFRYIGPPTPFPRFIPPNAYRLRPP 404
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 325 RKVLENRSLADEERMDALENQLKEARFLA 411
R+ R+ E++ ALEN+ K R+L+
Sbjct: 6 REARRARTAFTYEQLVALENKFKTTRYLS 34
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = -1
Query: 532 PXQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPPQR 407
P Q Q+ ++ + P Q QP P +Q + +P Q+
Sbjct: 1505 PQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQ 1546
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 21.4 bits (43), Expect = 8.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 313 SERARKVLENRSLADEERMDALENQLKEARFLAEEADKK 429
SER EN L E+ ALE+ LK + E+ +++
Sbjct: 95 SERRNIFGENDELIAEKVAHALESGLKVIACIGEKLEER 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.309 0.123 0.315
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,287
Number of Sequences: 438
Number of extensions: 3357
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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