Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2090
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 203 1e-54
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 198 3e-53
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 182 2e-48
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 153 1e-39
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 29 0.052
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 203 bits (496), Expect = 1e-54
Identities = 98/127 (77%), Positives = 103/127 (81%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMI 349
+ ++MGKGSFKYAWVLDKLKA+R RGITIDIALW ET+KYYVTIIDAPGHRDFI NMI
Sbjct: 44 KEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 103
Query: 350 TGTXHADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYX 529
TGT AD A LIV AGTGEFEAGIS NGQTREHALLA TLGVKQL K TEPPY
Sbjct: 104 TGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYS 163
Query: 530 XPRFEEI 550
RFEEI
Sbjct: 164 ETRFEEI 170
Score = 84.6 bits (200), Expect = 7e-19
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE HINIVVIGHVDSGKSTTTGHLIYK GGIDKRTI KFE
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE 43
Score = 53.6 bits (123), Expect = 2e-09
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 555 KEVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
KEVSSY K IGY P A A P++GWHGDNM E
Sbjct: 172 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 203
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 198 bits (484), Expect = 3e-53
Identities = 96/127 (75%), Positives = 101/127 (79%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMI 349
+ ++MGKGSFKYAWVLDKLKA+R RGITIDIALW ET KYYVTIIDAPGHRDFI NMI
Sbjct: 44 KEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMI 103
Query: 350 TGTXHADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYX 529
TGT AD A LIV AG GEFEAGIS NGQTREHALLA TLGVKQL K T+PPY
Sbjct: 104 TGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYS 163
Query: 530 XPRFEEI 550
RFEEI
Sbjct: 164 EARFEEI 170
Score = 84.6 bits (200), Expect = 7e-19
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE HINIVVIGHVDSGKSTTTGHLIYK GGIDKRTI KFE
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE 43
Score = 49.2 bits (112), Expect = 3e-08
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +3
Query: 555 KEVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
KEVSSY K IGY + A P++GWHGDNM E
Sbjct: 172 KEVSSYIKKIGYNTASVAFVPISGWHGDNMLE 203
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 182 bits (444), Expect = 2e-48
Identities = 89/113 (78%), Positives = 91/113 (80%)
Frame = +2
Query: 212 WVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVP 391
WVLDKLKA+R RGITIDIALW ET+KYYVTIIDAPGHRDFI NMITGT AD A LIV
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 392 AGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYXXPRFEEI 550
AGTGEFEAGIS NGQTREHALLA TLGVKQL K TEPPY RFEEI
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEI 113
Score = 53.6 bits (123), Expect = 2e-09
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 555 KEVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
KEVSSY K IGY P A A P++GWHGDNM E
Sbjct: 115 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 146
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 153 bits (371), Expect = 1e-39
Identities = 75/97 (77%), Positives = 76/97 (78%)
Frame = +2
Query: 260 DIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAGTGEFEAGISXNGQT 439
DIALW ET+KYYVTIIDAPGHRDFI NMITGT AD A LIV AGTGEFEAGIS NGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 440 REHALLAXTLGVKQLXXXAXKXXXTEPPYXXPRFEEI 550
REHALLA TLGVKQL K TEPPY RFEEI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEI 97
Score = 53.6 bits (123), Expect = 2e-09
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 555 KEVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
KEVSSY K IGY P A A P++GWHGDNM E
Sbjct: 99 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 130
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 28.7 bits (61), Expect = 0.052
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 299 VTIIDAPGHRDFIXNMITGTXHADXAXLIVPAGTG 403
VT +D PGH FI G D L+V A G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 57 HINIVVIGHVDSGKST 104
H + ++GHVD GK+T
Sbjct: 145 HPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 60 INIVVIGHVDSGKST 104
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 139 LTNVPSRSSSKEAQAN 186
LT+ P+RS S +AQA+
Sbjct: 675 LTSPPARSPSSQAQAS 690
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,681
Number of Sequences: 438
Number of extensions: 2340
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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