Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2058
         (780 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   1.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   4.2  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 15/58 (25%), Positives = 25/58 (43%)
 Frame = +2

Query: 482 QLKEAVAKPNDRVTLKVGPNLXEKSSQLTNKLTCYVRTLFDYYPTQDTLIPXKEIGLT 655
           +L + +  P  +        L +K  + T K    + T +DYY    TL+  +  GLT
Sbjct: 39  ELDKVLESPRGKYEFSKYDKLKKKLEEWTGK---NITTPWDYYYIYHTLVAEQSYGLT 93


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +2

Query: 482 QLKEAVAKPNDRVTLKVGPNLXEKSSQLTNKLTCYVRTLFDYYPTQDTLIPXKEIGLT 655
           +L   +  P  +        L +K  + T K    + T +DYY    TL+  +  GLT
Sbjct: 136 ELDRVLESPRGKYEFSKYDKLKKKLEEWTGK---NITTPWDYYYIYHTLVAEQSYGLT 190


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +2

Query: 482 QLKEAVAKPNDRVTLKVGPNLXEKSSQLTNKLTCYVRTLFDYYPTQDTLIPXKEIGLT 655
           +L   +  P  +        L +K  + T K    + T +DYY    TL+  +  GLT
Sbjct: 151 ELDRVLESPRGKYEFSKYDKLKKKLEEWTGK---NITTPWDYYYIYHTLVAEQSYGLT 205


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 142 MCPGYNDS*FGLLNSPY 92
           +CPG   S F L+ SPY
Sbjct: 203 LCPGMALSQFDLMGSPY 219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,465
Number of Sequences: 438
Number of extensions: 3829
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)