Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2046
         (670 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.0  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   8.0  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   8.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.0  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 613 IXTSFIRWSKLVVFEXLYVYRES 545
           + T FI W+   V   LYVY +S
Sbjct: 266 VITFFICWAPFHVQRLLYVYEDS 288


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 598 IRWSKLVVFEXLYV 557
           I+WSKL VF+  YV
Sbjct: 130 IQWSKLQVFDCRYV 143


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 84  EITPPLILVNNMGDADAR 137
           E+TPPL+ V+  G+A+ R
Sbjct: 334 EVTPPLLSVHLGGNAEFR 351


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 84  EITPPLILVNNMGDADAR 137
           E+TPPL+ V+  G+A+ R
Sbjct: 334 EVTPPLLSVHLGGNAEFR 351


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 155 MHTCLSTCVRVSHVID*Y 102
           +HT +ST + + +V+D Y
Sbjct: 329 LHTRISTAIDLGYVVDSY 346


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 196 LPKNYI*NIQNIEKCIPV 143
           L KNYI NI+ I   +PV
Sbjct: 116 LYKNYIINIEQIPVPVPV 133


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 196 LPKNYI*NIQNIEKCIPV 143
           L KNYI NI+ I   +PV
Sbjct: 116 LYKNYIINIEQIPVPVPV 133


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 528 DVKTKKLSL*TYNXSKTTNFDHLMKEV 608
           DVK K + L   N +K T+F   + EV
Sbjct: 722 DVKLKNVLLDIENRAKLTDFGFCITEV 748


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 528 DVKTKKLSL*TYNXSKTTNFDHLMKEV 608
           DVK K + L   N +K T+F   + EV
Sbjct: 760 DVKLKNVLLDIENRAKLTDFGFCITEV 786


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 155 MHTCLSTCVRVSHVID*Y 102
           +HT +ST + + +V+D Y
Sbjct: 329 LHTRISTAIDLGYVVDSY 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,272
Number of Sequences: 438
Number of extensions: 3889
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)