Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2019
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.76
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.8
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 2.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.3
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 2.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 4.0
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 7.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.3
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.3
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 9.3
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 9.3
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.0 bits (52), Expect = 0.76
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 260 FICLLLYILRFEISNIIIFMYKMRNARAH 174
F C++ + +S I+I Y RNA H
Sbjct: 298 FNCIMFMVASSVVSTILILNYHHRNADTH 326
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 58 IYETVNDDERDTSERSRKNARTRLSVTFGRTRRFDVFAVCA 180
+Y ++ E TS++ N T + +TRR+D + +
Sbjct: 1215 VYTKADNAEEPTSQKVPPNQLTHEASELDKTRRYDFWVTAS 1255
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -1
Query: 309 DVLVFLTCVCVRCTXVFYMFIIIYF 235
D VF+TC+ + + +FII+++
Sbjct: 216 DTKVFVTCIFIWAYVIPLIFIILFY 240
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDKR*KLXTIECMHAYXXLINNKF 685
+Y Y +S+ + RD+R RER K K + C ++ NN +
Sbjct: 277 EYRKYRETSK-ERSRDRRERERSKEPKIISSLSNSCNYSNNYYNNNNY 323
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -1
Query: 309 DVLVFLTCVCVRCTXVFYMFIIIYF 235
D VF+TC+ + + +FII+++
Sbjct: 216 DTKVFVTCIFIWAYVIPLIFIILFY 240
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDK 622
+Y Y +S+ ++R D+R RER K K
Sbjct: 288 EYRKYRETSKERFR-DRRERERSKESK 313
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 327 SKEKLTDVLVFLTCVCVRCTXVFY 256
SK+K DVL+ + + + VFY
Sbjct: 314 SKDKPEDVLIIIYTILTYMSGVFY 337
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 584 RDKRAREREKSDK 622
RDKR RER K K
Sbjct: 68 RDKRERERSKERK 80
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 584 RDKRAREREKSDK 622
RDKR RER K K
Sbjct: 68 RDKRERERSKERK 80
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDK 622
+Y Y +S+ + RD+R RER K K
Sbjct: 55 EYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDK 622
+Y Y +S+ + RD+R RER K K
Sbjct: 55 EYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDK 622
+Y Y +S+ + RD+R RER K K
Sbjct: 55 EYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDK 622
+Y Y +S+ + RD+R RER K K
Sbjct: 55 EYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDK 622
+Y Y +S+ + RD+R RER K K
Sbjct: 55 EYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDK 622
+Y Y +S+ + RD+R RER K K
Sbjct: 55 EYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDK 622
+Y Y +S+ + RD+R RER K K
Sbjct: 55 EYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 542 QY*IYNXSSQIQYRRDKRAREREKSDK 622
+Y Y +S+ + RD+R RER K K
Sbjct: 55 EYRKYRETSK-ERSRDRRERERSKEPK 80
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 53 IKYILFIYCFFF 18
IKY+LFI+ F F
Sbjct: 8 IKYLLFIFNFVF 19
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.4 bits (43), Expect = 9.3
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 58 IYETVNDDERDTSERSRKNARTRLSVTFGRTRRFDVFAVCARAFRILYINIIIFEISNLK 237
+ E + D+R ER + + ++ + R + D+ A C +A +Y+++I+ +S
Sbjct: 65 VQENIVIDKRPWWERYQPISYKWITRSGTREQFIDMVARCNKAGVRIYVDVIMNHMS--- 121
Query: 238 IYNNKHIKHG-GTTHAHT 288
+++ HG G + A+T
Sbjct: 122 --GDRNDAHGTGNSRANT 137
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,968
Number of Sequences: 438
Number of extensions: 2576
Number of successful extensions: 50
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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