Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2014
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 146 7e-35
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 146 7e-35
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 139 8e-33
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 125 2e-28
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 125 2e-28
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 125 2e-28
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 125 2e-28
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 125 2e-28
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 125 2e-28
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 123 5e-28
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 123 5e-28
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 120 5e-27
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 74 6e-13
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 74 6e-13
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 74 6e-13
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 74 6e-13
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 74 6e-13
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 70 9e-12
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 70 9e-12
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 70 9e-12
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 68 4e-11
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 66 1e-10
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 63 1e-09
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 63 1e-09
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 63 1e-09
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 60 7e-09
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 60 7e-09
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 60 7e-09
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 60 7e-09
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 60 7e-09
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 60 1e-08
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 60 1e-08
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 60 1e-08
BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein. 52 3e-06
AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG... 52 3e-06
AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG... 52 3e-06
AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protei... 52 3e-06
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 50 8e-06
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 50 8e-06
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 50 8e-06
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 46 1e-04
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 45 2e-04
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 45 2e-04
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 45 2e-04
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 45 3e-04
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 45 3e-04
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 45 3e-04
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 44 5e-04
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 44 5e-04
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 44 5e-04
AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing regula... 43 0.001
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 43 0.001
BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein. 43 0.001
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 43 0.001
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 43 0.001
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 42 0.002
BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein. 42 0.002
AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element (F... 42 0.002
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 42 0.002
AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element (F... 42 0.002
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 42 0.002
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 41 0.004
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 41 0.004
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 40 0.006
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 40 0.006
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 40 0.006
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 40 0.006
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 40 0.006
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 40 0.011
BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein. 40 0.011
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 40 0.011
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 40 0.011
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 40 0.011
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 40 0.011
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 40 0.011
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 38 0.026
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 38 0.026
BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 38 0.046
BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 38 0.046
AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE p... 38 0.046
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 36 0.11
BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.3
AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein. 32 2.3
AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens ... 31 5.2
AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884... 30 6.9
AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens ... 30 6.9
BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase... 30 9.1
AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated tran... 30 9.1
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 146 bits (354), Expect = 7e-35
Identities = 79/185 (42%), Positives = 112/185 (60%), Gaps = 2/185 (1%)
Frame = +3
Query: 78 DDGPAXKRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERV 251
++ A KR R TD+ E+ L+ K A Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 252 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 431
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 143
Query: 432 KELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVPIXGPIQAYDP 611
KELRE T +K+F P S++R+V + GKPD +V ++ +LDL+ PI G Q YDP
Sbjct: 144 KELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Query: 612 HNYDD 626
+ YD+
Sbjct: 204 NFYDE 208
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 146 bits (354), Expect = 7e-35
Identities = 79/185 (42%), Positives = 112/185 (60%), Gaps = 2/185 (1%)
Frame = +3
Query: 78 DDGPAXKRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERV 251
++ A KR R TD+ E+ L+ K A Y AS++VPD GPER+
Sbjct: 30 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 89
Query: 252 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 431
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 90 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 145
Query: 432 KELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVPIXGPIQAYDP 611
KELRE T +K+F P S++R+V + GKPD +V ++ +LDL+ PI G Q YDP
Sbjct: 146 KELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 205
Query: 612 HNYDD 626
+ YD+
Sbjct: 206 NFYDE 210
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 139 bits (337), Expect = 8e-33
Identities = 69/141 (48%), Positives = 97/141 (68%)
Frame = +3
Query: 204 YKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 383
Y AS++VPD GPER+LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LI
Sbjct: 61 YNASVSVPDSSGPERILSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLI 116
Query: 384 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLD 563
HQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V ++ +LD
Sbjct: 117 HQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILD 176
Query: 564 LVXXVPIXGPIQAYDPHNYDD 626
L+ PI G Q YDP+ YD+
Sbjct: 177 LISESPIKGRAQPYDPNFYDE 197
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 125 bits (301), Expect = 2e-28
Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 23/206 (11%)
Frame = +3
Query: 78 DDGPAXKRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERV 251
++ A KR R TD+ E+ L+ K A Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 252 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 368
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 549 RXVLDLVXXVPIXGPIQAYDPHNYDD 626
+ +LDL+ PI G Q YDP+ YD+
Sbjct: 207 KIILDLISESPIKGRAQPYDPNFYDE 232
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 125 bits (301), Expect = 2e-28
Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 23/206 (11%)
Frame = +3
Query: 78 DDGPAXKRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERV 251
++ A KR R TD+ E+ L+ K A Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 252 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 368
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 549 RXVLDLVXXVPIXGPIQAYDPHNYDD 626
+ +LDL+ PI G Q YDP+ YD+
Sbjct: 207 KIILDLISESPIKGRAQPYDPNFYDE 232
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 125 bits (301), Expect = 2e-28
Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 23/206 (11%)
Frame = +3
Query: 78 DDGPAXKRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERV 251
++ A KR R TD+ E+ L+ K A Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 252 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 368
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 549 RXVLDLVXXVPIXGPIQAYDPHNYDD 626
+ +LDL+ PI G Q YDP+ YD+
Sbjct: 207 KIILDLISESPIKGRAQPYDPNFYDE 232
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 125 bits (301), Expect = 2e-28
Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 23/206 (11%)
Frame = +3
Query: 78 DDGPAXKRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERV 251
++ A KR R TD+ E+ L+ K A Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 252 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 368
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 549 RXVLDLVXXVPIXGPIQAYDPHNYDD 626
+ +LDL+ PI G Q YDP+ YD+
Sbjct: 207 KIILDLISESPIKGRAQPYDPNFYDE 232
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 125 bits (301), Expect = 2e-28
Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 23/206 (11%)
Frame = +3
Query: 78 DDGPAXKRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERV 251
++ A KR R TD+ E+ L+ K A Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 252 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 368
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 549 RXVLDLVXXVPIXGPIQAYDPHNYDD 626
+ +LDL+ PI G Q YDP+ YD+
Sbjct: 207 KIILDLISESPIKGRAQPYDPNFYDE 232
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 125 bits (301), Expect = 2e-28
Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 23/206 (11%)
Frame = +3
Query: 78 DDGPAXKRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERV 251
++ A KR R TD+ E+ L+ K A Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 252 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 368
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 549 RXVLDLVXXVPIXGPIQAYDPHNYDD 626
+ +LDL+ PI G Q YDP+ YD+
Sbjct: 207 KIILDLISESPIKGRAQPYDPNFYDE 232
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 123 bits (297), Expect = 5e-28
Identities = 77/200 (38%), Positives = 107/200 (53%), Gaps = 23/200 (11%)
Frame = +3
Query: 96 KRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERVLSITAE 269
KR R TD+ E+ L+ K A Y AS++VPD GPER+LSI+A
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISA- 92
Query: 270 DDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELDVRMLIH 386
D ET+ EI+K I+P L E N + D + ++R+LIH
Sbjct: 93 DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIH 152
Query: 387 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDL 566
QS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V ++ +LDL
Sbjct: 153 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDL 212
Query: 567 VXXVPIXGPIQAYDPHNYDD 626
+ PI G Q YDP+ YD+
Sbjct: 213 ISESPIKGRAQPYDPNFYDE 232
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 123 bits (297), Expect = 5e-28
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 23/206 (11%)
Frame = +3
Query: 78 DDGPAXKRHRQTDD--EVTFLIPXKVAXXXXXXXXXXXXXXXXQYKASITVPDCPGPERV 251
++ A KR R TD+ E+ L+ K A Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 252 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 368
LSI+ D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSIST-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 549 RXVLDLVXXVPIXGPIQAYDPHNYDD 626
+ +LDL+ PI G Q YDP+ YD+
Sbjct: 207 KIILDLISESPIKGRAQPYDPNFYDE 232
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 120 bits (289), Expect = 5e-27
Identities = 69/163 (42%), Positives = 96/163 (58%), Gaps = 21/163 (12%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCL--------------------- 317
QY AS++VPD GPER+LSI+A D ET+ EI+K I+P L
Sbjct: 2 QYNASVSVPDSSGPERILSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 60
Query: 318 AEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSS 497
E N + D + ++R+LIHQS AG +IG G+KIKELRE T +K+F P S+
Sbjct: 61 VECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHST 120
Query: 498 ERIVXLIGKPDSIVSGVRXVLDLVXXVPIXGPIQAYDPHNYDD 626
+R+V + GKPD +V ++ +LDL+ PI G Q YDP+ YD+
Sbjct: 121 DRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDE 163
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 73.7 bits (173), Expect = 6e-13
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 365
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 46 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 102
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSG 545
+R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 546 VRXVLDLVXXVPIXGPIQAYDP 611
VR + ++ P G Y P
Sbjct: 163 VRQICAVILESPPKGATIPYHP 184
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 531 SI 536
SI
Sbjct: 297 SI 298
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 543 GVRXV 557
V +
Sbjct: 75 AVSMI 79
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 73.7 bits (173), Expect = 6e-13
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 365
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 46 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 102
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSG 545
+R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 546 VRXVLDLVXXVPIXGPIQAYDP 611
VR + ++ P G Y P
Sbjct: 163 VRQICAVILESPPKGATIPYHP 184
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 531 SI 536
SI
Sbjct: 297 SI 298
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 543 GVRXV 557
V +
Sbjct: 75 AVSMI 79
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 73.7 bits (173), Expect = 6e-13
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 365
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 46 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 102
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSG 545
+R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 546 VRXVLDLVXXVPIXGPIQAYDP 611
VR + ++ P G Y P
Sbjct: 163 VRQICAVILESPPKGATIPYHP 184
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 531 SI 536
SI
Sbjct: 297 SI 298
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 543 GVRXV 557
V +
Sbjct: 75 AVSMI 79
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 73.7 bits (173), Expect = 6e-13
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 365
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSG 545
+R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 128
Query: 546 VRXVLDLVXXVPIXGPIQAYDP 611
VR + ++ P G Y P
Sbjct: 129 VRQICAVILESPPKGATIPYHP 150
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 204 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 262
Query: 531 SI 536
SI
Sbjct: 263 SI 264
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 73.7 bits (173), Expect = 6e-13
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 365
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 46 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 102
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSG 545
+R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 546 VRXVLDLVXXVPIXGPIQAYDP 611
VR + ++ P G Y P
Sbjct: 163 VRQICAVILESPPKGATIPYHP 184
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 531 SI 536
SI
Sbjct: 297 SI 298
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 543 GVRXV 557
V +
Sbjct: 75 AVSMI 79
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 69.7 bits (163), Expect = 9e-12
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--LDVRMLI 383
A I + + PER+++IT D + N + + + +R+++
Sbjct: 45 ARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVV 104
Query: 384 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLD 563
S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V + G PD+I+ V+ +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICV 164
Query: 564 LVXXVPIXGPIQAYDP 611
++ P G Y P
Sbjct: 165 VMLESPPKGATIPYRP 180
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV + G D+I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 68
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER + + G P +I
Sbjct: 296 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 340
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 69.7 bits (163), Expect = 9e-12
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--LDVRMLI 383
A I + + PER+++IT D + N + + + +R+++
Sbjct: 77 ARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVV 136
Query: 384 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLD 563
S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V + G PD+I+ V+ +
Sbjct: 137 PASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICV 196
Query: 564 LVXXVPIXGPIQAYDP 611
++ P G Y P
Sbjct: 197 VMLESPPKGATIPYRP 212
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV + G D+I
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 100
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER + + G P +I
Sbjct: 286 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 330
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 69.7 bits (163), Expect = 9e-12
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--LDVRMLI 383
A I + + PER+++IT D + N + + + +R+++
Sbjct: 45 ARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVV 104
Query: 384 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLD 563
S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V + G PD+I+ V+ +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICV 164
Query: 564 LVXXVPIXGPIQAYDP 611
++ P G Y P
Sbjct: 165 VMLESPPKGATIPYRP 180
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV + G D+I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 68
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER + + G P +I
Sbjct: 274 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 318
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 67.7 bits (158), Expect = 4e-11
Identities = 33/91 (36%), Positives = 55/91 (60%)
Frame = +3
Query: 339 GSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLI 518
G + + +R++I S+ G +IG+AG+KIKE+RE TGA++++ + P S+ER V +
Sbjct: 94 GGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTVS 153
Query: 519 GKPDSIVSGVRXVLDLVXXVPIXGPIQAYDP 611
G PD+I+ VR + ++ P G Y P
Sbjct: 154 GVPDAIILCVRQICAVILESPPKGATIPYHP 184
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 531 SI 536
SI
Sbjct: 297 SI 298
Score = 42.3 bits (95), Expect = 0.002
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +RML+H G +IGK G +K +RE++ AR+ I S ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS---FLERITTITGSTAAVFH 74
Query: 543 GVRXV 557
V +
Sbjct: 75 AVSMI 79
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 66.1 bits (154), Expect = 1e-10
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--LDVRMLI 383
A I + + PER+++IT D + N + + + +R+++
Sbjct: 45 ARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVV 104
Query: 384 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXV 557
S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V + G PD+I+ V+ +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV + G D+I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 68
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER + + G P +I
Sbjct: 248 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 292
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 62.9 bits (146), Expect = 1e-09
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+ V
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 549 RXVLDLVXXVPIXGPIQAYDP 611
+ + ++ P G Y P
Sbjct: 160 KQICVVMLESPPKGVTIPYRP 180
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
Score = 43.6 bits (98), Expect = 7e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 297 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 341
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 62.9 bits (146), Expect = 1e-09
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+ V
Sbjct: 112 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 171
Query: 549 RXVLDLVXXVPIXGPIQAYDP 611
+ + ++ P G Y P
Sbjct: 172 KQICVVMLESPPKGVTIPYRP 192
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 82
Query: 543 GVRXVLD 563
++D
Sbjct: 83 AFAMIID 89
Score = 43.6 bits (98), Expect = 7e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 308 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 352
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 62.9 bits (146), Expect = 1e-09
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+ V
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 549 RXVLDLVXXVPIXGPIQAYDP 611
+ + ++ P G Y P
Sbjct: 160 KQICVVMLESPPKGVTIPYRP 180
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
Score = 43.6 bits (98), Expect = 7e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 310
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 60.1 bits (139), Expect = 7e-09
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQELDVRML 380
A I + + PER++++T + + + I+ L E N + + +R++
Sbjct: 45 ARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLV 103
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXV 557
+ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+ V+ +
Sbjct: 104 VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 53.2 bits (122), Expect = 9e-07
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 60.1 bits (139), Expect = 7e-09
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQELDVRML 380
A I + + PER++++T + + + I+ L E N + + +R++
Sbjct: 45 ARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLV 103
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXV 557
+ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+ V+ +
Sbjct: 104 VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 53.2 bits (122), Expect = 9e-07
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
Score = 41.5 bits (93), Expect = 0.003
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 375 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V + G SI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 60.1 bits (139), Expect = 7e-09
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQELDVRML 380
A I + + PER++++T + + + I+ L E N + + +R++
Sbjct: 45 ARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLV 103
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXV 557
+ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+ V+ +
Sbjct: 104 VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 53.2 bits (122), Expect = 9e-07
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
Score = 41.5 bits (93), Expect = 0.003
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 375 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V + G SI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 60.1 bits (139), Expect = 7e-09
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQELDVRML 380
A I + + PER++++T + + + I+ L E N + + +R++
Sbjct: 45 ARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLV 103
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXV 557
+ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+ V+ +
Sbjct: 104 VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 53.2 bits (122), Expect = 9e-07
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
Score = 41.5 bits (93), Expect = 0.003
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 375 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V + G SI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 60.1 bits (139), Expect = 7e-09
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQELDVRML 380
A I + + PER++++T + + + I+ L E N + + +R++
Sbjct: 45 ARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLV 103
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXV 557
+ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+ V+ +
Sbjct: 104 VPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 53.2 bits (122), Expect = 9e-07
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
Score = 41.5 bits (93), Expect = 0.003
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 375 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V + G SI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 59.7 bits (138), Expect = 1e-08
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+ V
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 549 RXV 557
+ +
Sbjct: 160 KQI 162
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
Score = 43.6 bits (98), Expect = 7e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 300 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 344
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 59.7 bits (138), Expect = 1e-08
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+ V
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 549 RXV 557
+ +
Sbjct: 160 KQI 162
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
Score = 43.6 bits (98), Expect = 7e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 270 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 314
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 59.7 bits (138), Expect = 1e-08
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
+R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+ V
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 549 RXV 557
+ +
Sbjct: 160 KQI 162
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 543 GVRXVLD 563
++D
Sbjct: 71 AFAMIID 77
Score = 43.6 bits (98), Expect = 7e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 301 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 345
>BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein.
Length = 360
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 195 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 253
Query: 531 SI 536
SI
Sbjct: 254 SI 255
Score = 46.8 bits (106), Expect = 7e-05
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVS 542
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 543 GVRXV 557
V +
Sbjct: 75 AVSMI 79
Score = 40.7 bits (91), Expect = 0.005
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 365
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 46 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 102
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELRE 446
+R++I S+ G +IGKAG+KIKE+RE
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRE 129
>AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 317
Query: 531 SI 536
SI
Sbjct: 318 SI 319
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 365
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 455
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
Score = 37.9 bits (84), Expect = 0.034
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 444 EKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVPIXGPIQAYDP 611
+ TGA++++ + P S+ER V + G PD+I+ VR + ++ P G Y P
Sbjct: 150 QTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP 205
>AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 317
Query: 531 SI 536
SI
Sbjct: 318 SI 319
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 365
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 455
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
Score = 37.9 bits (84), Expect = 0.034
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 444 EKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVPIXGPIQAYDP 611
+ TGA++++ + P S+ER V + G PD+I+ VR + ++ P G Y P
Sbjct: 150 QTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP 205
>AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protein
LIP4 protein.
Length = 276
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 81 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 139
Query: 531 SI 536
SI
Sbjct: 140 SI 141
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 50.0 bits (114), Expect = 8e-06
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Frame = +3
Query: 225 PDCPGPERVLSITAED------DETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 386
P G ++ L IT + E ++E+I+D E N+ GSR+G E + + I
Sbjct: 226 PQNTGADKPLRITGDPYKVQQAKEMVLELIRD-QGGFREVRNEYGSRIGGNE-GIDVPIP 283
Query: 387 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDL 566
+ G VIG+ G IK+++ G R++ F + ERI + G PD + DL
Sbjct: 284 RFAVGIVIGRNGEMIKKIQNDAGVRIQ-FKPDDGTTPERIAQITGPPDRCQHAAEIITDL 342
Query: 567 VXXVPIXGP 593
+ V P
Sbjct: 343 LRSVQAGNP 351
Score = 42.7 bits (96), Expect = 0.001
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Frame = +3
Query: 225 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 383
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 384 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS-SERIVXLIGKPDSIVSGVRXVL 560
S+AG VIGK G IK+L+E+ G ++ + + + +++ + + G P + VL
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 252
Query: 561 DLV 569
+L+
Sbjct: 253 ELI 255
Score = 36.7 bits (81), Expect = 0.080
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS--SERIVXLIGKPDSIV 539
+ ++ + G +IGK G IK + +++GAR+++ N P + + ++ + G P I
Sbjct: 378 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI- 436
Query: 540 SGVRXVLDLVXXVPI--XGPIQAYDPH 614
R +++ P+ GP + PH
Sbjct: 437 DYARQLIEEKIGGPVNPLGPPVPHGPH 463
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 50.0 bits (114), Expect = 8e-06
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Frame = +3
Query: 225 PDCPGPERVLSITAED------DETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 386
P G ++ L IT + E ++E+I+D E N+ GSR+G E + + I
Sbjct: 225 PQNTGADKPLRITGDPYKVQQAKEMVLELIRD-QGGFREVRNEYGSRIGGNE-GIDVPIP 282
Query: 387 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDL 566
+ G VIG+ G IK+++ G R++ F + ERI + G PD + DL
Sbjct: 283 RFAVGIVIGRNGEMIKKIQNDAGVRIQ-FKPDDGTTPERIAQITGPPDRCQHAAEIITDL 341
Query: 567 VXXVPIXGP 593
+ V P
Sbjct: 342 LRSVQAGNP 350
Score = 42.7 bits (96), Expect = 0.001
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Frame = +3
Query: 225 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 383
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 137 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 191
Query: 384 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS-SERIVXLIGKPDSIVSGVRXVL 560
S+AG VIGK G IK+L+E+ G ++ + + + +++ + + G P + VL
Sbjct: 192 PASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 251
Query: 561 DLV 569
+L+
Sbjct: 252 ELI 254
Score = 36.7 bits (81), Expect = 0.080
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS--SERIVXLIGKPDSIV 539
+ ++ + G +IGK G IK + +++GAR+++ N P + + ++ + G P I
Sbjct: 377 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI- 435
Query: 540 SGVRXVLDLVXXVPI--XGPIQAYDPH 614
R +++ P+ GP + PH
Sbjct: 436 DYARQLIEEKIGGPVNPLGPPVPHGPH 462
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 50.0 bits (114), Expect = 8e-06
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Frame = +3
Query: 225 PDCPGPERVLSITAED------DETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 386
P G ++ L IT + E ++E+I+D E N+ GSR+G E + + I
Sbjct: 76 PQNTGADKPLRITGDPYKVQQAKEMVLELIRD-QGGFREVRNEYGSRIGGNE-GIDVPIP 133
Query: 387 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDL 566
+ G VIG+ G IK+++ G R++ F + ERI + G PD + DL
Sbjct: 134 RFAVGIVIGRNGEMIKKIQNDAGVRIQ-FKPDDGTTPERIAQITGPPDRCQHAAEIITDL 192
Query: 567 VXXVPIXGP 593
+ V P
Sbjct: 193 LRSVQAGNP 201
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +3
Query: 324 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS-SE 500
FH+ G QE+ +I S+AG VIGK G IK+L+E+ G ++ + + + ++
Sbjct: 27 FHHGDGPGNAVQEI----MIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 82
Query: 501 RIVXLIGKPDSIVSGVRXVLDLV 569
+ + + G P + VL+L+
Sbjct: 83 KPLRITGDPYKVQQAKEMVLELI 105
Score = 36.7 bits (81), Expect = 0.080
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 366 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS--SERIVXLIGKPDSIV 539
+ ++ + G +IGK G IK + +++GAR+++ N P + + ++ + G P I
Sbjct: 228 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI- 286
Query: 540 SGVRXVLDLVXXVPI--XGPIQAYDPH 614
R +++ P+ GP + PH
Sbjct: 287 DYARQLIEEKIGGPVNPLGPPVPHGPH 313
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 46.0 bits (104), Expect = 1e-04
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Frame = +3
Query: 225 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 377
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 126 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 182
Query: 378 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSS-ERIVXLIGKPDSIVSGVRX 554
+I +AG VIGK G IK+L+E+ G ++ + + + ++ ++ + +IG P +
Sbjct: 183 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEM 242
Query: 555 VLDLVXXVPIXG 590
V+D++ V G
Sbjct: 243 VMDILRNVTKAG 254
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 393 RAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS--SERIVXLIGKPDSI 536
+ G VIG+ G +K + ++TGA ++I P + ++ + G P I
Sbjct: 377 KCGLVIGRGGENVKAINQQTGAFVEISRQLPPTGTPTSKLFIIRGSPQQI 426
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
+QE+ V + I G +IGK G+ IK+L GA +KI P SER+V + G P++
Sbjct: 425 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 483
Score = 34.7 bits (76), Expect = 0.32
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 357 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS--NSAPXSSERIVXLIGKPD 530
+E+ +++L H G +IGK G +K++ +TG ++ I S + + + ER + + G +
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 331
Query: 531 SIVS 542
+ S
Sbjct: 332 ACAS 335
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
+QE+ V + I G +IGK G+ IK+L GA +KI P SER+V + G P++
Sbjct: 425 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 483
Score = 34.7 bits (76), Expect = 0.32
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 357 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS--NSAPXSSERIVXLIGKPD 530
+E+ +++L H G +IGK G +K++ +TG ++ I S + + + ER + + G +
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 331
Query: 531 SIVS 542
+ S
Sbjct: 332 ACAS 335
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
+QE+ V + I G +IGK G+ IK+L GA +KI P SER+V + G P++
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 441
Score = 34.7 bits (76), Expect = 0.32
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 357 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS--NSAPXSSERIVXLIGKPD 530
+E+ +++L H G +IGK G +K++ +TG ++ I S + + + ER + + G +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 332
Query: 531 SIVS 542
+ S
Sbjct: 333 ACAS 336
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 44.8 bits (101), Expect = 3e-04
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Frame = +3
Query: 225 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 377
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 378 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSS-ERIVXLIGKPDSIVSGVRX 554
+I +AG VIGK G IK+L+E+ G ++ + + + ++ ++ + +IG P +
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEM 298
Query: 555 VLDLV 569
V+D++
Sbjct: 299 VMDIL 303
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 306 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 485
MP +G G ++ I + G VIG+ G +K + ++TGA ++I S
Sbjct: 406 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI-SRQL 464
Query: 486 PXSSE---RIVXLIGKPDSI 536
P + + ++ + G P I
Sbjct: 465 PPNGDPNFKLFIIRGSPQQI 484
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 44.8 bits (101), Expect = 3e-04
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Frame = +3
Query: 225 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 377
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 378 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSS-ERIVXLIGKPDSIVSGVRX 554
+I +AG VIGK G IK+L+E+ G ++ + + + ++ ++ + +IG P +
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEM 298
Query: 555 VLDLV 569
V+D++
Sbjct: 299 VMDIL 303
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 306 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 485
MP +G G ++ I + G VIG+ G +K + ++TGA ++I S
Sbjct: 406 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI-SRQL 464
Query: 486 PXSSE---RIVXLIGKPDSI 536
P + + ++ + G P I
Sbjct: 465 PPNGDPNFKLFIIRGSPQQI 484
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 348 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKP 527
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ + ++ ER++ + G P
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISGFP 105
Query: 528 DSIVSGVRXVLD 563
SG + D
Sbjct: 106 VQ-ASGAKITCD 116
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +3
Query: 348 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKP 527
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ + ++ ER++ + G P
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISGFP 105
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +3
Query: 348 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKP 527
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ + ++ ER++ + G P
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISGFP 105
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +3
Query: 348 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKP 527
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ + ++ ER++ + G P
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISGFP 105
>AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing
regulatory protein (FUSE binding protein 2) variant
protein.
Length = 384
Score = 43.2 bits (97), Expect = 0.001
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 321 EFH-NQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSS 497
+FH N G + G + ++I +AG VIGK G IK+L+E+ G ++ + + + ++
Sbjct: 40 QFHDNANGGQNGTVQ---EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 96
Query: 498 -ERIVXLIGKPDSIVSGVRXVLDLV 569
++ + +IG P + V+D++
Sbjct: 97 VDKPLRIIGDPYKVQQACEMVMDIL 121
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 306 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 485
MP +G G ++ I + G VIG+ G +K + ++TGA ++I S
Sbjct: 224 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI-SRQL 282
Query: 486 PXSSE---RIVXLIGKPDSI 536
P + + ++ + G P I
Sbjct: 283 PPNGDPNFKLFIIRGSPQQI 302
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 42.7 bits (96), Expect = 0.001
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS-SERIVXLIGKPD 530
D+ ++++ S AG +IGK G+ +K + E++GA +++ + ER+V + G+P+
Sbjct: 134 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE 193
Query: 531 SIVSGVRXVLDLVXXVP 581
+ V ++ V P
Sbjct: 194 QVHKAVSAIVQKVQEDP 210
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +3
Query: 342 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVX 512
S G++ E +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+
Sbjct: 31 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 90
Query: 513 LIGKPDSIVSGVRXVLDLVXXVP 581
+ G +++ + + + V +P
Sbjct: 91 VQGTAEALNAVHSFIAEKVREIP 113
Score = 35.1 bits (77), Expect = 0.24
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKP 527
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 415 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSP 469
>BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein.
Length = 304
Score = 42.7 bits (96), Expect = 0.001
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Frame = +3
Query: 225 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 383
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 384 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS-SERIVXLIGKPDSIVSGVRXVL 560
S+AG VIGK G IK+L+E+ G ++ + + + +++ + + G P + VL
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 252
Query: 561 DLV 569
+L+
Sbjct: 253 ELI 255
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 42.7 bits (96), Expect = 0.001
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS-SERIVXLIGKPD 530
D+ ++++ S AG +IGK G+ +K + E++GA +++ + ER+V + G+P+
Sbjct: 128 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE 187
Query: 531 SIVSGVRXVLDLVXXVP 581
+ V ++ V P
Sbjct: 188 QVHKAVSAIVQKVQEDP 204
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +3
Query: 342 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVX 512
S G++ E +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+
Sbjct: 25 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 84
Query: 513 LIGKPDSIVSGVRXVLDLVXXVP 581
+ G +++ + + + V +P
Sbjct: 85 VQGTAEALNAVHSFIAEKVREIP 107
Score = 35.1 bits (77), Expect = 0.24
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKP 527
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSP 463
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 42.7 bits (96), Expect = 0.001
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS-SERIVXLIGKPD 530
D+ ++++ S AG +IGK G+ +K + E++GA +++ + ER+V + G+P+
Sbjct: 100 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE 159
Query: 531 SIVSGVRXVLDLVXXVP 581
+ V ++ V P
Sbjct: 160 QVHKAVSAIVQKVQEDP 176
Score = 39.5 bits (88), Expect = 0.011
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +3
Query: 360 ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKPDS 533
E +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+ + G ++
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 63
Query: 534 IVSGVRXVLDLVXXVP 581
+ + + + V +P
Sbjct: 64 LNAVHSFIAEKVREIP 79
Score = 35.1 bits (77), Expect = 0.24
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKP 527
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSP 435
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 42.3 bits (95), Expect = 0.002
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +3
Query: 240 PER--VLSITAEDDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGC 404
PER VL+ T E E ++ I+ FHN S QE+ LI S+ G
Sbjct: 149 PERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGL 204
Query: 405 VIGKAGSKIKELREKTGARLKIFSNS-APXSSERIVXLIGKPDSIVSGVRXVLDLV 569
VIG+ G IK+L+E+TG ++ + + P +++ + + G + VL+++
Sbjct: 205 VIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEII 260
>BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein.
Length = 261
Score = 42.3 bits (95), Expect = 0.002
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +3
Query: 240 PER--VLSITAEDDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGC 404
PER VL+ T E E ++ I+ FHN S QE+ LI S+ G
Sbjct: 61 PERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGL 116
Query: 405 VIGKAGSKIKELREKTGARLKIFSNS-APXSSERIVXLIGKPDSIVSGVRXVLDLV 569
VIG+ G IK+L+E+TG ++ + + P +++ + + G + VL+++
Sbjct: 117 VIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEII 172
>AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 42.3 bits (95), Expect = 0.002
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +3
Query: 240 PER--VLSITAEDDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGC 404
PER VL+ T E E ++ I+ FHN S QE+ LI S+ G
Sbjct: 61 PERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGL 116
Query: 405 VIGKAGSKIKELREKTGARLKIFSNS-APXSSERIVXLIGKPDSIVSGVRXVLDLV 569
VIG+ G IK+L+E+TG ++ + + P +++ + + G + VL+++
Sbjct: 117 VIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEII 172
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 42.3 bits (95), Expect = 0.002
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +3
Query: 240 PER--VLSITAEDDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGC 404
PER VL+ T E E ++ I+ FHN S QE+ LI S+ G
Sbjct: 121 PERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGL 176
Query: 405 VIGKAGSKIKELREKTGARLKIFSNS-APXSSERIVXLIGKPDSIVSGVRXVLDLV 569
VIG+ G IK+L+E+TG ++ + + P +++ + + G + VL+++
Sbjct: 177 VIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEII 232
>AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 42.3 bits (95), Expect = 0.002
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +3
Query: 240 PER--VLSITAEDDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGC 404
PER VL+ T E E ++ I+ FHN S QE+ LI S+ G
Sbjct: 61 PERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGL 116
Query: 405 VIGKAGSKIKELREKTGARLKIFSNS-APXSSERIVXLIGKPDSIVSGVRXVLDLV 569
VIG+ G IK+L+E+TG ++ + + P +++ + + G + VL+++
Sbjct: 117 VIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEII 172
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 42.3 bits (95), Expect = 0.002
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +3
Query: 240 PER--VLSITAEDDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGC 404
PER VL+ T E E ++ I+ FHN S QE+ LI S+ G
Sbjct: 121 PERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGL 176
Query: 405 VIGKAGSKIKELREKTGARLKIFSNS-APXSSERIVXLIGKPDSIVSGVRXVLDLV 569
VIG+ G IK+L+E+TG ++ + + P +++ + + G + VL+++
Sbjct: 177 VIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEII 232
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 41.1 bits (92), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
V + I G +IGK G IK+L GA +KI AP + R+V + G P++
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 41.1 bits (92), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
V + I G +IGK G IK+L GA +KI AP + R+V + G P++
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 40.3 bits (90), Expect = 0.006
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
V I G +IGK G IK+L GA +KI AP + R+V + G P++
Sbjct: 408 VHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 40.3 bits (90), Expect = 0.006
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
V I G +IGK G IK+L GA +KI AP + R+V + G P++
Sbjct: 408 VHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 40.3 bits (90), Expect = 0.006
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
+QE+ V++ I G +IGK G IK+L A +KI P S R+V + G P++
Sbjct: 265 EQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEA 323
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 40.3 bits (90), Expect = 0.006
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
+QE+ V++ I G +IGK G IK+L A +KI P S R+V + G P++
Sbjct: 404 EQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEA 462
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 40.3 bits (90), Expect = 0.006
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
+QE+ V++ I G +IGK G IK+L A +KI P S R+V + G P++
Sbjct: 404 EQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEA 462
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 39.5 bits (88), Expect = 0.011
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 405 VIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVP- 581
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ + + L+ +
Sbjct: 742 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNLDN 799
Query: 582 IXGPIQAYDPHNYDDFLCGKXMXASEMGQGNG 677
+ DP ++ F+ + E+ + G
Sbjct: 800 VVEDSMLVDPKHHRHFVIRRGQVLREIAEEYG 831
Score = 31.5 bits (68), Expect = 3.0
Identities = 34/112 (30%), Positives = 52/112 (46%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 380
QYK S+ +P P E+ I E D V+ K + LA SRM + E ++
Sbjct: 464 QYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTKDLI 513
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
I Q +IG+ G +I+E+R+K + F + A S IV L G + +
Sbjct: 514 IEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 563
>BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein.
Length = 589
Score = 39.5 bits (88), Expect = 0.011
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 405 VIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVP- 581
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ + + L+ +
Sbjct: 63 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNLDN 120
Query: 582 IXGPIQAYDPHNYDDFLCGKXMXASEMGQGNG 677
+ DP ++ F+ + E+ + G
Sbjct: 121 VVEDSMLVDPKHHRHFVIRRGQVLREIAEEYG 152
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 39.5 bits (88), Expect = 0.011
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 405 VIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVP- 581
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ + + L+ +
Sbjct: 372 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNLDN 429
Query: 582 IXGPIQAYDPHNYDDFLCGKXMXASEMGQGNG 677
+ DP ++ F+ + E+ + G
Sbjct: 430 VVEDSMLVDPKHHRHFVIRRGQVLREIAEEYG 461
Score = 31.5 bits (68), Expect = 3.0
Identities = 34/112 (30%), Positives = 52/112 (46%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 380
QYK S+ +P P E+ I E D V+ K + LA SRM + E ++
Sbjct: 94 QYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTKDLI 143
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
I Q +IG+ G +I+E+R+K + F + A S IV L G + +
Sbjct: 144 IEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 193
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 39.5 bits (88), Expect = 0.011
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 405 VIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVP- 581
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ + + L+ +
Sbjct: 742 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNLDN 799
Query: 582 IXGPIQAYDPHNYDDFLCGKXMXASEMGQGNG 677
+ DP ++ F+ + E+ + G
Sbjct: 800 VVEDSMLVDPKHHRHFVIRRGQVLREIAEEYG 831
Score = 31.5 bits (68), Expect = 3.0
Identities = 34/112 (30%), Positives = 52/112 (46%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 380
QYK S+ +P P E+ I E D V+ K + LA SRM + E ++
Sbjct: 464 QYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTKDLI 513
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
I Q +IG+ G +I+E+R+K + F + A S IV L G + +
Sbjct: 514 IEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 563
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 39.5 bits (88), Expect = 0.011
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 405 VIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVP- 581
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ + + L+ +
Sbjct: 239 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNLDN 296
Query: 582 IXGPIQAYDPHNYDDFLCGKXMXASEMGQGNG 677
+ DP ++ F+ + E+ + G
Sbjct: 297 VVEDSMLVDPKHHRHFVIRRGQVLREIAEEYG 328
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 39.5 bits (88), Expect = 0.011
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 405 VIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVP- 581
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ + + L+ +
Sbjct: 425 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNLDN 482
Query: 582 IXGPIQAYDPHNYDDFLCGKXMXASEMGQGNG 677
+ DP ++ F+ + E+ + G
Sbjct: 483 VVEDSMLVDPKHHRHFVIRRGQVLREIAEEYG 514
Score = 30.3 bits (65), Expect = 6.9
Identities = 33/112 (29%), Positives = 52/112 (46%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 380
QYK S+ +P P E+ I E D V+ K + LA SR+ + E ++
Sbjct: 147 QYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRL-ENERTKDLI 196
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
I Q +IG+ G +I+E+R+K + F + A S IV L G + +
Sbjct: 197 IEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 246
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 39.5 bits (88), Expect = 0.011
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 405 VIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVP- 581
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ + + L+ +
Sbjct: 742 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNLDN 799
Query: 582 IXGPIQAYDPHNYDDFLCGKXMXASEMGQGNG 677
+ DP ++ F+ + E+ + G
Sbjct: 800 VVEDSMLVDPKHHRHFVIRRGQVLREIAEEYG 831
Score = 31.5 bits (68), Expect = 3.0
Identities = 34/112 (30%), Positives = 52/112 (46%)
Frame = +3
Query: 201 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 380
QYK S+ +P P E+ I E D V+ K + LA SRM + E ++
Sbjct: 464 QYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTKDLI 513
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
I Q +IG+ G +I+E+R+K + F + A S IV L G + +
Sbjct: 514 IEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 563
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 38.3 bits (85), Expect = 0.026
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKP 527
D + +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+ + G
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 106
Query: 528 DSI 536
+++
Sbjct: 107 EAL 109
Score = 35.1 bits (77), Expect = 0.24
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKP 527
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 38.3 bits (85), Expect = 0.026
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKP 527
D + +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+ + G
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 106
Query: 528 DSI 536
+++
Sbjct: 107 EAL 109
Score = 35.1 bits (77), Expect = 0.24
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKP 527
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
>BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 37.5 bits (83), Expect = 0.046
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 324 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 485
F +QG G +E + I + G VIG +GSKIK+L+ T +++I + +
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIINGES 89
>BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 37.5 bits (83), Expect = 0.046
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 324 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 485
F +QG G +E + I + G VIG +GSKIK+L+ T +++I + +
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIINGES 89
>AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE
protein.
Length = 630
Score = 37.5 bits (83), Expect = 0.046
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 324 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 485
F +QG G +E + I + G VIG +GSKIK+L+ T +++I + +
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIINGES 89
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 36.3 bits (80), Expect = 0.11
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA-----PXSSERIVXLI 518
D + +++LI AG +IGK G I +L+++TGA +K+ S P ++ER+ +
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQ 106
Query: 519 GKPDSI 536
G +++
Sbjct: 107 GTVEAL 112
Score = 35.1 bits (77), Expect = 0.24
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKP 527
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 481
>BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43 protein.
Length = 648
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERI 506
G +EL + + G VIG+ GSKIK ++ T ++I P S +I
Sbjct: 64 GHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQ-PESLVKI 114
>AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein.
Length = 648
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERI 506
G +EL + + G VIG+ GSKIK ++ T ++I P S +I
Sbjct: 64 GHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQ-PESLVKI 114
>AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ10884 fis, clone NT2RP4001950. ).
Length = 440
Score = 30.7 bits (66), Expect = 5.2
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 264 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 443
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 189 ASQKSSMKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 247
Query: 444 EKTGARLKIFSN 479
E A+ + N
Sbjct: 248 EVKVAKPEEMKN 259
>AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884)
protein.
Length = 865
Score = 30.3 bits (65), Expect = 6.9
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 264 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 443
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 444 EKTGARLKIFSN 479
E A+ + N
Sbjct: 362 EVKVAKPEEMKN 373
>AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ11111 fis, clone PLACE1005923. ).
Length = 865
Score = 30.3 bits (65), Expect = 6.9
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 264 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 443
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 444 EKTGARLKIFSN 479
E A+ + N
Sbjct: 362 EVKVAKPEEMKN 373
>BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase
domain containing 1 protein.
Length = 865
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +3
Query: 264 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 443
A ++ E++KD++P E NQGG G QE + LI I G L+
Sbjct: 303 ASQKSSMKELLKDVLPQKEEI-NQGGRNYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 444 EKTGARLKIFSN 479
E A+ + N
Sbjct: 362 EVKVAKPEEMKN 373
>AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated
transcript 11 protein.
Length = 865
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +3
Query: 264 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 443
A ++ E++KD++P E NQGG G QE + LI I G L+
Sbjct: 303 ASQKSSMKELLKDVLPQKEEI-NQGGRNYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 444 EKTGARLKIFSN 479
E A+ + N
Sbjct: 362 EVKVAKPEEMKN 373
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,472,658
Number of Sequences: 237096
Number of extensions: 1917082
Number of successful extensions: 7321
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 7122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7298
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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