Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2013
(530 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69150-1|CAB56794.1| 152|Homo sapiens ribosomal protein S18 pro... 194 2e-49
BC106063-1|AAI06064.1| 152|Homo sapiens ribosomal protein S18 p... 194 2e-49
BC101788-1|AAI01789.1| 152|Homo sapiens ribosomal protein S18 p... 194 2e-49
BC101786-1|AAI01787.1| 152|Homo sapiens ribosomal protein S18 p... 194 2e-49
AL844527-17|CAI41848.1| 152|Homo sapiens ribosomal protein S18 ... 194 2e-49
AL713971-5|CAI17656.1| 152|Homo sapiens ribosomal protein S18 p... 194 2e-49
AL662827-19|CAI17530.1| 152|Homo sapiens ribosomal protein S18 ... 194 2e-49
AL662820-19|CAI18127.1| 152|Homo sapiens ribosomal protein S18 ... 194 2e-49
AL645940-16|CAI18076.1| 152|Homo sapiens ribosomal protein S18 ... 194 2e-49
AL031228-3|CAA20231.1| 152|Homo sapiens ribosomal protein S18 p... 194 2e-49
AL031228-2|CAI95617.1| 82|Homo sapiens ribosomal protein S18 p... 126 6e-29
BC071678-1|AAH71678.1| 74|Homo sapiens LOC645958 protein protein. 101 2e-21
BX248408-4|CAM26259.1| 34|Homo sapiens ribosomal protein S18 p... 54 2e-07
AY536376-1|AAT66049.1| 34|Homo sapiens rhabdomyosarcoma antige... 54 2e-07
>X69150-1|CAB56794.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>BC106063-1|AAI06064.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>BC101788-1|AAI01789.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>BC101786-1|AAI01787.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>AL844527-17|CAI41848.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>AL713971-5|CAI17656.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>AL662827-19|CAI17530.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>AL662820-19|CAI18127.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>AL645940-16|CAI18076.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>AL031228-3|CAA20231.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 194 bits (472), Expect = 2e-49
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>AL031228-2|CAI95617.1| 82|Homo sapiens ribosomal protein S18
protein.
Length = 82
Score = 126 bits (303), Expect = 6e-29
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = +2
Query: 230 MSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLR 409
M NP QYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLR
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 60
Query: 410 VRGQH 424
VRGQH
Sbjct: 61 VRGQH 65
>BC071678-1|AAH71678.1| 74|Homo sapiens LOC645958 protein protein.
Length = 74
Score = 101 bits (242), Expect = 2e-21
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = +2
Query: 254 IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
+P WFLNRQKD+ DGKYSQ+ ++ LD+KL EDLERLKKIRA RG+RH+WGLRVRGQH
Sbjct: 1 MPAWFLNRQKDVKDGKYSQVLANGLDNKLCEDLERLKKIRARRGLRHFWGLRVRGQH 57
>BX248408-4|CAM26259.1| 34|Homo sapiens ribosomal protein S18
protein.
Length = 34
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>AY536376-1|AAT66049.1| 34|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.21 protein.
Length = 34
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,217,730
Number of Sequences: 237096
Number of extensions: 1407745
Number of successful extensions: 2944
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2942
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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