Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2011
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L31626-1|AAA21800.1|  416|Drosophila melanogaster homeodomain-co...    31   1.8  
BT029256-1|ABK30893.1|  416|Drosophila melanogaster FI01103p pro...    31   1.8  
AY060309-1|AAL25348.1|  138|Drosophila melanogaster GH15741p pro...    31   1.8  
AE013599-403|AAF59260.1|  416|Drosophila melanogaster CG11121-PA...    31   1.8  
AL035245-1|CAA22835.1|  323|Drosophila melanogaster EG:BACH61I5....    28   9.6  
AE014298-305|AAF45701.1|  323|Drosophila melanogaster CG3600-PA ...    28   9.6  
AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-P...    28   9.6  
AE013599-3270|AAM71014.1|  267|Drosophila melanogaster CG30398-P...    28   9.6  

>L31626-1|AAA21800.1|  416|Drosophila melanogaster
           homeodomain-containing protein protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 490 NRNEYTLNILTRNNWRAGSGASSDYDKNGGQSSNVDSG 603
           N N  TL+I+  N   AG G   +   NGG    V SG
Sbjct: 52  NNNNSTLDIMAHNGGGAGGGLHLNSSSNGGGGGGVVSG 89


>BT029256-1|ABK30893.1|  416|Drosophila melanogaster FI01103p
           protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 490 NRNEYTLNILTRNNWRAGSGASSDYDKNGGQSSNVDSG 603
           N N  TL+I+  N   AG G   +   NGG    V SG
Sbjct: 52  NNNNSTLDIMAHNGGGAGGGLHLNSSSNGGGGGGVVSG 89


>AY060309-1|AAL25348.1|  138|Drosophila melanogaster GH15741p
           protein.
          Length = 138

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 490 NRNEYTLNILTRNNWRAGSGASSDYDKNGGQSSNVDSG 603
           N N  TL+I+  N   AG G   +   NGG    V SG
Sbjct: 52  NNNNSTLDIMAHNGGGAGGGLHLNSSSNGGGGGGVVSG 89


>AE013599-403|AAF59260.1|  416|Drosophila melanogaster CG11121-PA
           protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 490 NRNEYTLNILTRNNWRAGSGASSDYDKNGGQSSNVDSG 603
           N N  TL+I+  N   AG G   +   NGG    V SG
Sbjct: 52  NNNNSTLDIMAHNGGGAGGGLHLNSSSNGGGGGGVVSG 89


>AL035245-1|CAA22835.1|  323|Drosophila melanogaster EG:BACH61I5.1
           protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 469 GTLTRPRNRNEYTLNILTRNNWRAGSGASSDYDKNGGQSSNVDSG 603
           G+L  P   N  ++NI  RNN    +  +S+ + N   +   DSG
Sbjct: 118 GSLQMPHANNGSSININNRNNTNNTNNNNSNNNNNAASNDVCDSG 162


>AE014298-305|AAF45701.1|  323|Drosophila melanogaster CG3600-PA
           protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 469 GTLTRPRNRNEYTLNILTRNNWRAGSGASSDYDKNGGQSSNVDSG 603
           G+L  P   N  ++NI  RNN    +  +S+ + N   +   DSG
Sbjct: 118 GSLQMPHANNGSSININNRNNTNNTNNNNSNNNNNAASNDVCDSG 162


>AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-PA
           protein.
          Length = 804

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 241 VIQIHQN*RLRTRGPPSIGFDL 176
           ++QI  N +  TR PPSIG DL
Sbjct: 353 IVQIRDNIQAETRRPPSIGGDL 374


>AE013599-3270|AAM71014.1|  267|Drosophila melanogaster CG30398-PA
           protein.
          Length = 267

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 595 PHSTTDRRSCRSLNWHQILPSNCSSLKYLKCT 500
           PH T        LN+ ++L  NC  LKY++ T
Sbjct: 123 PHLTEPPHFRNLLNFFEVLVKNCRYLKYIRLT 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,149,802
Number of Sequences: 53049
Number of extensions: 672146
Number of successful extensions: 1992
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1991
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)