Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2009
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.8
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 4.0
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 22 7.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.3
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 9.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.3
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 161 SVSTIWKPDPGTVRAAP 211
+++ +WK D GT+R +P
Sbjct: 213 AITYVWKNDEGTLRKSP 229
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 161 SVSTIWKPDPGTVRAAP 211
+++ +WK D GT+R +P
Sbjct: 213 AITYVWKNDEGTLRKSP 229
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 161 SVSTIWKPDPGTVRAAP 211
+++ +WK D GT+R +P
Sbjct: 264 AITYVWKNDEGTLRKSP 280
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 161 SVSTIWKPDPGTVRAAP 211
+++ +WK D GT+R +P
Sbjct: 213 AITYVWKNDEGTLRKSP 229
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 689 TFVRQQTHSSCSCINNPNAXTL 624
T VR +S+CS N+P+ L
Sbjct: 339 TIVRNHLNSTCSVTNSPHQKKL 360
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 211 EKVIGKALVGVPRDSYYIG 267
E VIGK +V V R+ Y G
Sbjct: 101 EVVIGKEIVAVCRNEEYTG 119
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -1
Query: 429 YNRSVRSKSYIMYLDQIDI 373
YN+ + K+YI+ ++QI +
Sbjct: 100 YNKKLYYKNYIINIEQIPV 118
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -1
Query: 429 YNRSVRSKSYIMYLDQIDI 373
YN+ + K+YI+ ++QI +
Sbjct: 111 YNKKLYYKNYIINIEQIPV 129
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -1
Query: 429 YNRSVRSKSYIMYLDQIDI 373
YN+ + K+YI+ ++QI +
Sbjct: 341 YNKKLYYKNYIINIEQIPV 359
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -1
Query: 429 YNRSVRSKSYIMYLDQIDI 373
YN+ + K+YI+ ++QI +
Sbjct: 336 YNKKLYYKNYIINIEQIPV 354
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,334
Number of Sequences: 438
Number of extensions: 3933
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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