Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2008
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 272 9e-73
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 272 9e-73
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 272 9e-73
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 272 9e-73
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 272 9e-73
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 150 5e-36
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 150 5e-36
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 150 5e-36
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 150 5e-36
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 150 5e-36
AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A (5... 92 2e-18
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 46 2e-04
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 46 2e-04
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 46 2e-04
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 45 3e-04
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 272 bits (667), Expect = 9e-73
Identities = 134/249 (53%), Positives = 170/249 (68%)
Frame = +2
Query: 2 FNTPEGASTVVKLKNFVKFEDXXXXXXXXXXXIEGXXXXXXXXXXXXXXXXEVQDQLLVG 181
F TPE A+ +VKLK+F KF+D +EG E + L V
Sbjct: 32 FETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVK-EAHEPLAVA 90
Query: 182 DSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSRYK 361
D+KLG I+EK +L C+ + V EL+R IRSQMD L+ G+ +EM AM LGLAHSLSRY+
Sbjct: 91 DAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYR 150
Query: 362 LKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVVKL 541
LKFS DK+DTMIVQA LLDDLDKELNNYIMRCREWYGWHFPELGKII+DN + K ++
Sbjct: 151 LKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQK 210
Query: 542 IGTRDYASKTDLSDILPEDLXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXITDYRTH 721
+G R + LS++LPE++ +V AAEISMGTE+SE+DI NI +L ++I I++YRT
Sbjct: 211 VGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQ 270
Query: 722 LTDYLXARM 748
L +YL RM
Sbjct: 271 LYEYLQNRM 279
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 272 bits (667), Expect = 9e-73
Identities = 134/249 (53%), Positives = 170/249 (68%)
Frame = +2
Query: 2 FNTPEGASTVVKLKNFVKFEDXXXXXXXXXXXIEGXXXXXXXXXXXXXXXXEVQDQLLVG 181
F TPE A+ +VKLK+F KF+D +EG E + L V
Sbjct: 32 FETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVK-EAHEPLAVA 90
Query: 182 DSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSRYK 361
D+KLG I+EK +L C+ + V EL+R IRSQMD L+ G+ +EM AM LGLAHSLSRY+
Sbjct: 91 DAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYR 150
Query: 362 LKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVVKL 541
LKFS DK+DTMIVQA LLDDLDKELNNYIMRCREWYGWHFPELGKII+DN + K ++
Sbjct: 151 LKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQK 210
Query: 542 IGTRDYASKTDLSDILPEDLXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXITDYRTH 721
+G R + LS++LPE++ +V AAEISMGTE+SE+DI NI +L ++I I++YRT
Sbjct: 211 VGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQ 270
Query: 722 LTDYLXARM 748
L +YL RM
Sbjct: 271 LYEYLQNRM 279
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 272 bits (667), Expect = 9e-73
Identities = 134/249 (53%), Positives = 170/249 (68%)
Frame = +2
Query: 2 FNTPEGASTVVKLKNFVKFEDXXXXXXXXXXXIEGXXXXXXXXXXXXXXXXEVQDQLLVG 181
F TPE A+ +VKLK+F KF+D +EG E + L V
Sbjct: 32 FETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVK-EAHEPLAVA 90
Query: 182 DSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSRYK 361
D+KLG I+EK +L C+ + V EL+R IRSQMD L+ G+ +EM AM LGLAHSLSRY+
Sbjct: 91 DAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYR 150
Query: 362 LKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVVKL 541
LKFS DK+DTMIVQA LLDDLDKELNNYIMRCREWYGWHFPELGKII+DN + K ++
Sbjct: 151 LKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQK 210
Query: 542 IGTRDYASKTDLSDILPEDLXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXITDYRTH 721
+G R + LS++LPE++ +V AAEISMGTE+SE+DI NI +L ++I I++YRT
Sbjct: 211 VGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQ 270
Query: 722 LTDYLXARM 748
L +YL RM
Sbjct: 271 LYEYLQNRM 279
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 272 bits (667), Expect = 9e-73
Identities = 134/249 (53%), Positives = 170/249 (68%)
Frame = +2
Query: 2 FNTPEGASTVVKLKNFVKFEDXXXXXXXXXXXIEGXXXXXXXXXXXXXXXXEVQDQLLVG 181
F TPE A+ +VKLK+F KF+D +EG E + L V
Sbjct: 32 FETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVK-EAHEPLAVA 90
Query: 182 DSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSRYK 361
D+KLG I+EK +L C+ + V EL+R IRSQMD L+ G+ +EM AM LGLAHSLSRY+
Sbjct: 91 DAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYR 150
Query: 362 LKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVVKL 541
LKFS DK+DTMIVQA LLDDLDKELNNYIMRCREWYGWHFPELGKII+DN + K ++
Sbjct: 151 LKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQK 210
Query: 542 IGTRDYASKTDLSDILPEDLXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXITDYRTH 721
+G R + LS++LPE++ +V AAEISMGTE+SE+DI NI +L ++I I++YRT
Sbjct: 211 VGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQ 270
Query: 722 LTDYLXARM 748
L +YL RM
Sbjct: 271 LYEYLQNRM 279
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 272 bits (667), Expect = 9e-73
Identities = 134/249 (53%), Positives = 170/249 (68%)
Frame = +2
Query: 2 FNTPEGASTVVKLKNFVKFEDXXXXXXXXXXXIEGXXXXXXXXXXXXXXXXEVQDQLLVG 181
F TPE A+ +VKLK+F KF+D +EG E + L V
Sbjct: 32 FETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVK-EAHEPLAVA 90
Query: 182 DSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSRYK 361
D+KLG I+EK +L C+ + V EL+R IRSQMD L+ G+ +EM AM LGLAHSLSRY+
Sbjct: 91 DAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYR 150
Query: 362 LKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVVKL 541
LKFS DK+DTMIVQA LLDDLDKELNNYIMRCREWYGWHFPELGKII+DN + K ++
Sbjct: 151 LKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQK 210
Query: 542 IGTRDYASKTDLSDILPEDLXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXITDYRTH 721
+G R + LS++LPE++ +V AAEISMGTE+SE+DI NI +L ++I I++YRT
Sbjct: 211 VGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQ 270
Query: 722 LTDYLXARM 748
L +YL RM
Sbjct: 271 LYEYLQNRM 279
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 150 bits (364), Expect = 5e-36
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Frame = +2
Query: 176 VGDSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSR 355
VGD K+G+AI+E+ C + + E+LR +R +L+ GL LGL HS SR
Sbjct: 101 VGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSR 160
Query: 356 YKLKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVV 535
K+KF+ +++D MI+Q+ LLD LDK++N + MR REWYG+HFPEL KII DN + ++
Sbjct: 161 AKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLA 220
Query: 536 KLIGTRDYASKTDLSDI--LPED--LXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXI 703
+ IG R ++ L + L D + + A+ SMG +IS D++NI++ ++ +
Sbjct: 221 QFIGNRRELNEDKLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSL 280
Query: 704 TDYRTHLTDYLXARM 748
++YR L YL ++M
Sbjct: 281 SEYRQSLHTYLRSKM 295
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 150 bits (364), Expect = 5e-36
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Frame = +2
Query: 176 VGDSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSR 355
VGD K+G+AI+E+ C + + E+LR +R +L+ GL LGL HS SR
Sbjct: 95 VGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSR 154
Query: 356 YKLKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVV 535
K+KF+ +++D MI+Q+ LLD LDK++N + MR REWYG+HFPEL KII DN + ++
Sbjct: 155 AKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLA 214
Query: 536 KLIGTRDYASKTDLSDI--LPED--LXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXI 703
+ IG R ++ L + L D + + A+ SMG +IS D++NI++ ++ +
Sbjct: 215 QFIGNRRELNEDKLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSL 274
Query: 704 TDYRTHLTDYLXARM 748
++YR L YL ++M
Sbjct: 275 SEYRQSLHTYLRSKM 289
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 150 bits (364), Expect = 5e-36
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Frame = +2
Query: 176 VGDSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSR 355
VGD K+G+AI+E+ C + + E+LR +R +L+ GL LGL HS SR
Sbjct: 95 VGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSR 154
Query: 356 YKLKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVV 535
K+KF+ +++D MI+Q+ LLD LDK++N + MR REWYG+HFPEL KII DN + ++
Sbjct: 155 AKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLA 214
Query: 536 KLIGTRDYASKTDLSDI--LPED--LXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXI 703
+ IG R ++ L + L D + + A+ SMG +IS D++NI++ ++ +
Sbjct: 215 QFIGNRRELNEDKLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSL 274
Query: 704 TDYRTHLTDYLXARM 748
++YR L YL ++M
Sbjct: 275 SEYRQSLHTYLRSKM 289
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 150 bits (364), Expect = 5e-36
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Frame = +2
Query: 176 VGDSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSR 355
VGD K+G+AI+E+ C + + E+LR +R +L+ GL LGL HS SR
Sbjct: 91 VGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSR 150
Query: 356 YKLKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVV 535
K+KF+ +++D MI+Q+ LLD LDK++N + MR REWYG+HFPEL KII DN + ++
Sbjct: 151 AKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLA 210
Query: 536 KLIGTRDYASKTDLSDI--LPED--LXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXI 703
+ IG R ++ L + L D + + A+ SMG +IS D++NI++ ++ +
Sbjct: 211 QFIGNRRELNEDKLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSL 270
Query: 704 TDYRTHLTDYLXARM 748
++YR L YL ++M
Sbjct: 271 SEYRQSLHTYLRSKM 285
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 150 bits (364), Expect = 5e-36
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Frame = +2
Query: 176 VGDSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSR 355
VGD K+G+AI+E+ C + + E+LR +R +L+ GL LGL HS SR
Sbjct: 95 VGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSR 154
Query: 356 YKLKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVV 535
K+KF+ +++D MI+Q+ LLD LDK++N + MR REWYG+HFPEL KII DN + ++
Sbjct: 155 AKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLA 214
Query: 536 KLIGTRDYASKTDLSDI--LPED--LXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXI 703
+ IG R ++ L + L D + + A+ SMG +IS D++NI++ ++ +
Sbjct: 215 QFIGNRRELNEDKLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSL 274
Query: 704 TDYRTHLTDYLXARM 748
++YR L YL ++M
Sbjct: 275 SEYRQSLHTYLRSKM 289
>AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 281
Score = 92.3 bits (219), Expect = 2e-18
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 29/155 (18%)
Frame = +2
Query: 176 VGDSKLGSAIREKFDLQCVSNTNVQELLRCIRSQMDSLLAGLPKKEMTAMALGLAHSLSR 355
VGD K+G+AI+E+ C + + E+LR +R +L+ GL LGL HS SR
Sbjct: 95 VGDPKIGAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSR 154
Query: 356 YKLKFSPDKIDTMIVQAQCLLDDLDKELNNYIMRCRE-----------WY---------- 472
K+KF+ +++D MI+Q+ LLD LDK++N + MR R+ W+
Sbjct: 155 AKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVRQSRCGEGKAVALWFLMKQLGQGVT 214
Query: 473 --------GWHFPELGKIITDNTLFVKVVKLIGTR 553
G+HFPEL KII DN + ++ + IG R
Sbjct: 215 VALCREWYGYHFPELVKIINDNATYCRLAQFIGNR 249
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 45.6 bits (103), Expect = 2e-04
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 392 MIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVVKLIGTR--DYAS 565
+IV A L +++ ELN R+ Y FPEL ++ + +++ VK +G +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 566 KTDLSDILPEDLXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXITDYRTHLTDYLXAR 745
+L IL V A + G ++SE+++ ++ D + + + + +Y+ +R
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 746 M 748
M
Sbjct: 212 M 212
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 45.6 bits (103), Expect = 2e-04
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 392 MIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVVKLIGTR--DYAS 565
+IV A L +++ ELN R+ Y FPEL ++ + +++ VK +G +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 566 KTDLSDILPEDLXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXITDYRTHLTDYLXAR 745
+L IL V A + G ++SE+++ ++ D + + + + +Y+ +R
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 746 M 748
M
Sbjct: 212 M 212
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 45.6 bits (103), Expect = 2e-04
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 392 MIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVVKLIGTR--DYAS 565
+IV A L +++ ELN R+ Y FPEL ++ + +++ VK +G +
Sbjct: 12 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 71
Query: 566 KTDLSDILPEDLXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXITDYRTHLTDYLXAR 745
+L IL V A + G ++SE+++ ++ D + + + + +Y+ +R
Sbjct: 72 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 131
Query: 746 M 748
M
Sbjct: 132 M 132
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 44.8 bits (101), Expect = 3e-04
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 392 MIVQAQCLLDDLDKELNNYIMRCREWYGWHFPELGKIITDNTLFVKVVKLIGTR--DYAS 565
+IV A L +++ ELN R+ Y FPEL ++ + +++ VK +G +
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 566 KTDLSDILPEDLXEKVXGAAEISMGTEISEDDIMNIQNLXDEIIXITDYRTHLTDYLXAR 745
+L IL V A + G ++SE+++ + D + + + + +Y+ +R
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLDEACDMALELNASKHRIYEYVESR 211
Query: 746 M 748
M
Sbjct: 212 M 212
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,626,127
Number of Sequences: 237096
Number of extensions: 1780443
Number of successful extensions: 3215
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3205
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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