Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1919
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 23 3.2
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 5.5
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 22 5.5
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 5.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 7.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 7.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 7.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 7.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 7.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 7.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 7.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 7.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 7.3
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 42 SRRTLPINERGSGGDVVAKEPKTQPSG 122
+RR + RG+GG K P+T SG
Sbjct: 3 TRRVKRSDGRGNGGTPEEKRPRTAFSG 29
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 97 KNQKLSPQVRSTATLPVRDDVSLLMLHSIH 186
+N PQ + AT+P+ + M+H +H
Sbjct: 301 RNGLAFPQRETGATVPLHMQKYVQMIHDLH 330
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 310 IVITCENKFSKSWLH 266
I+ITC + SKS +H
Sbjct: 60 ILITCRKRVSKSRIH 74
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 97 KNQKLSPQVRSTATLPVRDDVSLLMLHSIH 186
+N PQ + AT+P+ + M+H +H
Sbjct: 301 RNGLAFPQRETGATVPLHMQKYVQMIHDLH 330
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 456 FHNYSNSHIFDYIKKXSYDIERLNI 382
++NY+N++ +Y KK Y +NI
Sbjct: 330 YNNYNNNNYNNYNKKLYYKNYIINI 354
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 62 DRQGAPRAGEVGFGSEG 12
D G P E+GF +EG
Sbjct: 206 DHYGVPTLEELGFDTEG 222
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 456 FHNYSNSHIFDYIKKXSYDI 397
++NY+N++ ++ KK Y+I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 456 FHNYSNSHIFDYIKKXSYDI 397
++NY+N++ ++ KK Y+I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 456 FHNYSNSHIFDYIKKXSYDI 397
++NY+N++ ++ KK Y+I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 456 FHNYSNSHIFDYIKKXSYDI 397
++NY+N++ ++ KK Y+I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 456 FHNYSNSHIFDYIKKXSYDI 397
++NY+N++ ++ KK Y+I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 456 FHNYSNSHIFDYIKKXSYDI 397
++NY+N++ ++ KK Y+I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 456 FHNYSNSHIFDYIKKXSYDI 397
++NY+N++ ++ KK Y+I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 456 FHNYSNSHIFDYIKKXSYDI 397
++NY+N++ ++ KK Y+I
Sbjct: 94 YNNYNNNNNYNNYKKLYYNI 113
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,054
Number of Sequences: 438
Number of extensions: 2588
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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