Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1908
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 374 e-104
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 374 e-104
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 374 e-104
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 374 e-104
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 374 e-104
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 374 e-104
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 373 e-104
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 371 e-103
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 360 e-100
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 335 2e-92
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 281 5e-76
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 231 5e-61
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 186 2e-47
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 184 6e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 184 6e-47
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 183 1e-46
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 177 7e-45
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 148 5e-36
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 115 3e-26
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 56 4e-08
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 56 4e-08
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.29
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 32 0.38
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.38
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 32 0.38
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 32 0.38
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 29 2.7
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 2.7
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 29 2.7
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 3.5
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.5
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 3.5
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 29 4.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 4.7
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 374 bits (919), Expect = e-104
Identities = 173/181 (95%), Positives = 176/181 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGD V+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 374 bits (919), Expect = e-104
Identities = 173/181 (95%), Positives = 176/181 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGD V+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 374 bits (919), Expect = e-104
Identities = 173/181 (95%), Positives = 176/181 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGD V+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 374 bits (919), Expect = e-104
Identities = 173/181 (95%), Positives = 176/181 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGD V+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 374 bits (919), Expect = e-104
Identities = 173/181 (95%), Positives = 176/181 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGD V+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 374 bits (919), Expect = e-104
Identities = 173/181 (95%), Positives = 176/181 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGD V+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 373 bits (917), Expect = e-104
Identities = 173/181 (95%), Positives = 176/181 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFNTPAMYVAIQAVLSLYA GRTTGIVLDSGD V+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 371 bits (913), Expect = e-103
Identities = 171/181 (94%), Positives = 176/181 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 444
S RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 445 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLD 624
TQIMFETFNTPAMYVAIQAVLSLYA GRTTGIVLDSGD V+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 625 L 627
L
Sbjct: 181 L 181
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 216
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 360 bits (885), Expect = e-100
Identities = 166/179 (92%), Positives = 172/179 (96%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSX 270
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 271 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQ 450
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NRE MTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 451 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
IMFETFNTPAMYV IQAVLSLYA GRTTGIVLD+GD V+HTVPIY GYALPHAI RLDL
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDY+MKILTERGY+ TTT EREIVRDI+EK
Sbjct: 182 GRDLTDYMMKILTERGYTFTTTAEREIVRDIKEK 215
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 335 bits (823), Expect = 2e-92
Identities = 155/163 (95%), Positives = 158/163 (96%)
Frame = +1
Query: 139 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVT 318
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 319 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFETFNTPAMYVAIQ 498
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 499 AVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
AVLSLYA GRTTG+VLDSGD V+HTVPIY GYALPHAILRLDL
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 167
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 169 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 202
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 281 bits (688), Expect = 5e-76
Identities = 130/137 (94%), Positives = 132/137 (96%)
Frame = +1
Query: 217 MVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 396
MVGMGQKDSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 397 LLTEAPLNPKANREXMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTV 576
LLTEAPLNPKANRE MTQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGD V+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 577 PIYXGYALPHAILRLDL 627
PIY GYALPHAILRLDL
Sbjct: 121 PIYEGYALPHAILRLDL 137
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRDLTDYLMKILTERGYS TTT EREIVRDI+EK
Sbjct: 139 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 172
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 231 bits (564), Expect = 5e-61
Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSXRGILTL 288
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 289 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFET 465
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 466 FNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
FN PA+Y+ +QAVLSLYA GRTTG+VLDSGD V+H VPI G+A+ HAI R+DL
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDL 184
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREKA 736
GRD+T+YL +L GY + E EIVR+++E A
Sbjct: 186 GRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENA 220
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 186 bits (452), Expect = 2e-47
Identities = 90/176 (51%), Positives = 121/176 (68%), Gaps = 3/176 (1%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSXRGIL 282
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 283 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREXMTQIMF 459
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NRE M Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 460 ETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRLDL 627
E + ++YVA+QAVL+LYA G TG+V+DSGD V+H P+Y G+AL H RLD+
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDI 184
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +2
Query: 632 GRDLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
GRD+T YL+K+L +RGY+ + + E VR ++EK
Sbjct: 186 GRDITKYLIKLLLQRGYNFNHSADFETVRQMKEK 219
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 184 bits (448), Expect = 6e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKI 342
S RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 184 bits (448), Expect = 6e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKI 342
S RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 183 bits (445), Expect = 1e-46
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDMEKI 342
S RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 177 bits (431), Expect = 7e-45
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SXRGILTLKYPIEHGIVTNWDDM 333
S RGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 148 bits (358), Expect = 5e-36
Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 21/202 (10%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 228
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 229 GQKDSYVGDEAQSXRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 405
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 406 EAPLNPKANREXMTQIMFETFNTPAMYVAIQAVLSLYAXGRT--------TGIVLDSGDX 561
E PLN NRE +IMFE+FN P +Y+A+QAVL+L A + TG+V+DSGD
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 562 VSHTVPIYXGYALPHAILRLDL 627
V+H +P+ GY + I + +
Sbjct: 181 VTHCIPVADGYVIGSCIKHIPI 202
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 115 bits (277), Expect = 3e-26
Identities = 64/192 (33%), Positives = 107/192 (55%), Gaps = 17/192 (8%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP---------RHQGVMVGMG----- 231
+EV+ LV D GS + GFAG++ P+ PS + + + + G
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 232 --QKDSYVGD-EAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 402
+K+ ++G + R ++ ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 403 TEAPLNPKANREXMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPI 582
+E+ N +A RE +T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPV 188
Query: 583 YXGYALPHAILR 618
+ GYA+ HA+++
Sbjct: 189 FDGYAVTHAVVK 200
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 55.6 bits (128), Expect = 4e-08
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Frame = +1
Query: 100 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSXRGI 279
+ ++ DNG K G ++PR V SIV + +H+ +K +V E +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHE-------KKRVFVAHEQEECSDK 54
Query: 280 LTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQI 453
+L Y PIE G V NWD ++IW TF + V + LT+ A + ++I
Sbjct: 55 FSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEI 113
Query: 454 MFETFNTPAMYVAIQAVL----SLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRL 621
+F+ F ++ + L S +V+DSG + G + +++R+
Sbjct: 114 LFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRI 173
Query: 622 DL 627
D+
Sbjct: 174 DV 175
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 55.6 bits (128), Expect = 4e-08
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Frame = +1
Query: 100 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSXRGI 279
+ ++ DNG K G ++PR V SIV + +H+ +K +V E +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHE-------KKRVFVAHEQEECSDK 54
Query: 280 LTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQI 453
+L Y PIE G V NWD ++IW TF + V + LT+ A + ++I
Sbjct: 55 FSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEI 113
Query: 454 MFETFNTPAMYVAIQAVL----SLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAILRL 621
+F+ F ++ + L S +V+DSG + G + +++R+
Sbjct: 114 LFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRI 173
Query: 622 DL 627
D+
Sbjct: 174 DV 175
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 49.6 bits (113), Expect = 2e-06
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 2/170 (1%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSXRGIL 282
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 283 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFE 462
+E + D+ K EL+V P ++ VLL+ P + QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 463 TFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDXVSHTVPIYXGYALPHAI 612
+ + Q L LYA TTG+V+D G+ V + VP+ GY + AI
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAI 347
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 33.9 bits (74), Expect = 0.12
Identities = 29/86 (33%), Positives = 32/86 (37%)
Frame = +3
Query: 192 GKAPPSGRDGRYGTEGLLCRR*GTEXKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 371
G A P+G DG GT G YP+P P G G D AS A
Sbjct: 193 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGA 249
Query: 372 CRPRGTPRPAY*GSPQPQGQQREXDP 449
P G P PA G+P P G P
Sbjct: 250 AGPPGPPGPA--GAPGPDGNPGTAGP 273
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.29
Identities = 29/86 (33%), Positives = 32/86 (37%)
Frame = +3
Query: 192 GKAPPSGRDGRYGTEGLLCRR*GTEXKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 371
G A P+G DG GT G YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 372 CRPRGTPRPAY*GSPQPQGQQREXDP 449
P G P PA G+P P G P
Sbjct: 251 AGPPGPPGPA--GAPGPDGNPGTAGP 274
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 467 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDT 595
ST P T+P P S T VPPV+ TP T + T +T T
Sbjct: 659 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 700
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 467 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDT 595
ST P T+P P S T VPPV+ TP T + T +T T
Sbjct: 715 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 756
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 467 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDT 595
ST P T+P P S T VPPV+ TP T + T +T T
Sbjct: 538 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.3 bits (70), Expect = 0.38
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 413 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLXLCASSPT*ESF 234
GA S G SS S+ I + ++ T+ S PL + +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 233 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 90
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 467 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPSCVWT 625
+T P T+ + P + T P + T T +PT +T T + TP+ T
Sbjct: 121 TTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTT 173
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 467 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPSCVWT 625
+T T+ + P + T P + TP T + TP +T T +PT T
Sbjct: 67 TTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = +2
Query: 461 KHSTRPPCTSPSKPCSRC-----TRX-VVPPVSCWTPATGSPTPCPSTRDTHSPT 607
KH+ P C SP + R TR + VS GSPTP P+ D +PT
Sbjct: 300 KHNNCPICRSPFRALIRLRAHRQTRNQIYETVSLVEGLNGSPTPIPTVTDPVNPT 354
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +2
Query: 461 KHSTRPPCTSPS-----KPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPT 607
K ST PP TS S KP + T P S T T +P P ST + S T
Sbjct: 579 KVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTT 632
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +2
Query: 461 KHSTRPPCTSPS-----KPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPT 607
K ST PP TS S KP + T P S T T +P P ST + S T
Sbjct: 579 KVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTT 632
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 485 TSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSP 604
TSP P + +PP + T T + PCP T++P
Sbjct: 122 TSPPAPVDQKPPPCIPPTTTTTTTTTTRPPCPYPPATNTP 161
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +2
Query: 479 PCTSPSKPCSRCTRXVVPPVSCWTPATGS--PTPCPSTRDTHSPTPSCVWTWXGRDLTD- 649
P T+ + + T P + TP T + PT +T T + TP+ T LT+
Sbjct: 85 PSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLTEV 144
Query: 650 YLMKILTERGYSXTTT 697
+ TE + TTT
Sbjct: 145 FRTSTTTEAPFFTTTT 160
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 467 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPSCVWT 625
+T PC + + + T +VP S T T + TP P T T PT + T
Sbjct: 440 TTPVPCPTTTSTTTSATT-LVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTT 491
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +2
Query: 467 STRPPCTSPSKPCSRCTRXVVP-PVSCWTPATGSPTPCPSTRDTHS-PTPSCVWTWXG-R 637
+T T+ KP + T P P + P T + TP P+T T S PT T +
Sbjct: 420 TTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPLK 479
Query: 638 DLTDYLMKILTERGYSXTTTGEREIVRDIREK 733
TD++ R Y T + +++ +K
Sbjct: 480 KCTDFVEDCDKLRIYCHTEAENAKFLKEAVKK 511
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.7
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Frame = +1
Query: 262 QSXRGIL---TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 432
+S RG L TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 184 RSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKSK 241
Query: 433 REXMTQIMF-ETFNTPAMYVAIQA--VLSLYAXGRTTGIVLDSGDXVSHTVPI 582
T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 242 GIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 563 TXSPESSTIPVVRPXAYSESTAWMATYMAGVL 468
T P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +2
Query: 467 STRPPC--TSPSKPCSRC---TRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
ST PP T+P + + T PP S TP + T P T T SP+ S
Sbjct: 200 STEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 253
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +2
Query: 467 STRPPC--TSPSKPCSRC---TRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
ST PP TSP + + T PP S TP + T P T T P+ S
Sbjct: 177 STEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 230
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +2
Query: 467 STRPPCTSPSKPCSRC-----TRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPS 613
ST PP +S + + T PP S TP + T P T T SP+ S
Sbjct: 476 STEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 529
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 473 RPPCTSPSKPCSRCTRXVVPPVSCWTPATGSPTPCPSTRDTHSPTPSCV 619
RPP P KP + PP P +P P P+ + +P P+ V
Sbjct: 181 RPPPQEPPKPVEQAAPPP-PPAPMPVPVEKAPEPVPAPVEQIAPPPAPV 228
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 139 KAGFAGDDAPRAVFPSIVGRPRHQG 213
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,214,205
Number of Sequences: 27780
Number of extensions: 408058
Number of successful extensions: 1797
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1777
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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