Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1898
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     24   1.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.3  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   7.1  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   7.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   7.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.1  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   7.1  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   7.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.3  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 2   GTGTDRYVKNL*FS*PVRSYFAAFLLNFQK 91
           GTGT    K + F  P+   F AF ++F+K
Sbjct: 217 GTGTIILKKTVCFVIPIMLLFLAFFVSFRK 246


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 614 WYKSRRSARSLCQRW 658
           W+ S RSAR + Q W
Sbjct: 573 WHPSDRSARLMLQPW 587


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 545 DCCYPCRSSRVCRHVCAAGDSRN 613
           D C  CR+  +C  V +AG+S++
Sbjct: 56  DAC--CRTHDMCPDVMSAGESKH 76


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 545 DCCYPCRSSRVCRHVCAAGDSRN 613
           D C  CR+  +C  V +AG+S++
Sbjct: 61  DAC--CRTHDMCPDVMSAGESKH 81


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 404 TVHGNGTYSVLSQVLRHLQDQAGRSILHLKG 312
           T HG    +VL++   H  D  G  ++H+ G
Sbjct: 179 TPHGWMRRNVLNKQHVHFHDYTGSVVIHVVG 209


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +3

Query: 87  KNIIEMFPTVCRVGRLATKTVVNNATEKASLVTGAAVNKRDYAAKA 224
           +N++     VC++        + +ATE A    G  +  R  A +A
Sbjct: 764 RNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTAPEA 809



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 330 RSPRLVLEVAQHLGENTVRTIAMDGTE 410
           RSP  + ++AQ+ G N +   A+D T+
Sbjct: 897 RSPDTLRKIAQNRGTNPLAPDAVDLTQ 923


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -2

Query: 395 GNGTYSVLSQVLRHLQDQAGRSILHLKGI 309
           G+ TY+     L+H++ +AG +++  KGI
Sbjct: 177 GSWTYNGAQVDLKHMKQEAGSNLV-AKGI 204


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 545 DCCYPCRSSRVCRHVCAAGDSRN 613
           D C  CR+  +C  V +AG+S++
Sbjct: 61  DAC--CRTHDMCPDVMSAGESKH 81


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 399 DGTEGLVRGQPVLDSGSPI 455
           DGTEG+ +   VL    PI
Sbjct: 193 DGTEGIAKSGDVLVETEPI 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,987
Number of Sequences: 438
Number of extensions: 4897
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)