Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1879
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.1  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   9.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   9.3  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   9.3  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   9.3  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 385 KKRKLYHPQQHDGAA 429
           KK KL  P+Q DGAA
Sbjct: 433 KKNKLKKPRQGDGAA 447



 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 438 RHQPQQQHPH 467
           +H P Q HPH
Sbjct: 320 QHHPSQYHPH 329


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 363 TTTGKWLQETETVPSAAARRCSGALRHQPQQQHPH 467
           TTT      T T  + A    +G ++ +  Q+H H
Sbjct: 109 TTTTTTTTTTATAAATATTTATGLIKQETLQRHHH 143



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = +1

Query: 244  KPEPEDRDSDAQRSSPRPLDVKRARVENIVSTMRSSPAPQQPQVNGCKKRKLYHPQQ 414
            + E   RDS     S R  +V     +        + APQQPQ    ++++    QQ
Sbjct: 1409 RDEDSTRDSTKLDRSSREREVHNGGQQEDRDRKTLTSAPQQPQQQQQQQQQQQQQQQ 1465


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 613 VGKESETVDNDGAXSDVEQIEESIPKSE 696
           +GK   +  +  +   VE  +  IPK++
Sbjct: 142 IGKNETSTQSSRSVESVEDFDNEIPKNQ 169


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 613 VGKESETVDNDGAXSDVEQIEESIPKSE 696
           +GK   +  +  +   VE  +  IPK++
Sbjct: 190 IGKNETSTQSSRSVESVEDFDNEIPKNQ 217


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 613 VGKESETVDNDGAXSDVEQIEESIPKSE 696
           +GK   +  +  +   VE  +  IPK++
Sbjct: 190 IGKNETSTQSSRSVESVEDFDNEIPKNQ 217


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 613 VGKESETVDNDGAXSDVEQIEESIPKSE 696
           +GK   +  +  +   VE  +  IPK++
Sbjct: 190 IGKNETSTQSSRSVESVEDFDNEIPKNQ 217


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.305    0.125    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,201
Number of Sequences: 438
Number of extensions: 2725
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)