Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1878
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    79   5e-17
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.3  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   5.8  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   5.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 79.0 bits (186), Expect = 5e-17
 Identities = 49/165 (29%), Positives = 88/165 (53%), Gaps = 10/165 (6%)
 Frame = +2

Query: 209 QDEERIVGGHNAELNEWPWIVAL---FNAGRQFCGGSIIDDKHVISAAHCVAHMTSWDVA 379
           ++  RIVGG N  +NE+P +  +   +  G   CG +II  ++V++AAHC+      +  
Sbjct: 156 KNPSRIVGGTNTGINEFPMMAGIKRTYEPG-MICGATIISKRYVLTAAHCI---IDENTT 211

Query: 380 RLTARLGDYNIRTNTET-SHIERKIKRVVRHRGFDI----RTLYNDIAILTLDQPVTFTK 544
           +L   +G+++  + TET + +   I +V+ H  +DI        NDIA+L  ++ + F  
Sbjct: 212 KLAIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGD 271

Query: 545 NIRPICLPSGG--RAYAGLVATVIGWGSLRESGPQPSVLQEVSIS 673
            + P CLP      ++AG   TV+GWG    +G    +LQ+ +++
Sbjct: 272 KVGPACLPFQHFLDSFAGSDVTVLGWGHTSFNGMLSHILQKTTLN 316


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 551 RPICLPSGGRAYAGLVATVIGWGSLRESGP 640
           +P C    GR   G+V    GWG   ++GP
Sbjct: 593 KPHCAEEIGRGQYGIVFACDGWGG--KAGP 620


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 551 RPICLPSGGRAYAGLVATVIGWGSLRESGP 640
           +P C    GR   G+V    GWG   ++GP
Sbjct: 631 KPHCAEEIGRGQYGIVFACDGWGG--KAGP 658


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 260 PWIVALFNAGRQFCGG 307
           P +VA F AGR+ C G
Sbjct: 453 PLLVAPFGAGRRICPG 468



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -1

Query: 83 AWWYWAA 63
          AWW+W A
Sbjct: 28 AWWFWTA 34


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 538 YKEHSSHLFTERRSGLRWPCCYRHRMGQLAREWSAAVCSS 657
           ++E    +     SGLRW   +R  +    RE +A  C++
Sbjct: 14  FRESRCSVRCSAASGLRWFEIWRDSLPTKMRELNATACAA 53


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 244 RAKRMALDRSSV*CWASILR 303
           RAK   L +S++ CWA+I +
Sbjct: 246 RAKSEILYKSTLHCWATIYK 265


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 244 RAKRMALDRSSV*CWASILR 303
           RAK   L +S++ CWA+I +
Sbjct: 246 RAKSEILYKSTLHCWATIYK 265


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 649 CSSRSINFRFGLTSECRLK 705
           C  R IN+ FG+T   RL+
Sbjct: 222 CDQR-INYHFGMTDNSRLE 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,170
Number of Sequences: 438
Number of extensions: 5056
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)