Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1874
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 32 0.005
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 26 0.43
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 24 1.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 4.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 7.1
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 32.3 bits (70), Expect = 0.005
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 59 IGIYG-EQGLVGVKGETGDEGEAGFIGPPGLQGIEGDKG 172
+G+ G +QG+ GV+ G +G G G G+QG++G +G
Sbjct: 835 LGVQGVQQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQG 873
Score = 30.3 bits (65), Expect = 0.020
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 71 GEQGLVGVKGETGDEGEAGFIGPPG-LQGIEGDKGDTLLPSDILPG-QPGDVGLPGFDGR 244
G QG+ GV+G G +G G G PG LQG++ G + ++ G Q G G +
Sbjct: 852 GVQGVQGVQGVQGVQGVQGVQGVPGLLQGVQQVFGQGVQGMNVPYGMQRGQSGGQTWSNS 911
Query: 245 --DGVAGIPGS 271
GVA +PGS
Sbjct: 912 QVQGVA-VPGS 921
Score = 28.3 bits (60), Expect = 0.081
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 71 GEQGLVGVKGETGDEGEAGFIGPPGLQGIEGDKG 172
G QG+ +G G +G G G G+QG++G G
Sbjct: 843 GVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPG 876
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 25.8 bits (54), Expect = 0.43
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 290 GNHFDQKTLGFLLHHPVHQILAIQHHQVVQVKYLMEA 180
GNH T+G HH HQ ++QH Q L E+
Sbjct: 339 GNHTMGPTMGPPHHHHHHQTQSLQHLHYRQPPTLSES 375
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.8 bits (49), Expect = 1.8
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 128 FIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGR 244
F+ P L G+EG G L SDI L DV L G R
Sbjct: 391 FVSSPFLNGLEGLTGRGLFISDIPLHDATRDVILVGEQAR 430
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 366 VSKVNE-GLKVSLDCMAASVVPVHQHLHLQYPNLEDFISRFI 488
VS +E GLK+ LD + H+ L N+E + + +I
Sbjct: 106 VSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 366 VSKVNE-GLKVSLDCMAASVVPVHQHLHLQYPNLEDFISRFI 488
VS +E GLK+ LD + H+ L N+E + + +I
Sbjct: 106 VSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 228 GNPTSPGCPGKISDGSRVSPLS 163
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 228 GNPTSPGCPGKISDGSRVSPLS 163
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 228 GNPTSPGCPGKISDGSRVSPLS 163
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 228 GNPTSPGCPGKISDGSRVSPLS 163
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 228 GNPTSPGCPGKISDGSRVSPLS 163
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 228 GNPTSPGCPGKISDGSRVSPLS 163
G P S G P + D S PLS
Sbjct: 371 GTPISTGRPATVEDTSASLPLS 392
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 228 GNPTSPGCPGKISDGSRVSPLS 163
G P S G P + D S PLS
Sbjct: 439 GTPISTGRPATVEDTSASLPLS 460
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 228 GNPTSPGCPGKISDGSRVSPLS 163
G P S G P + D S PLS
Sbjct: 439 GTPISTGRPATVEDTSASLPLS 460
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 240 PSNPGNPTSPGCPGKISDGSRV 175
PS G PT PG SDG R+
Sbjct: 368 PSCGGGPTILTTPGLDSDGIRL 389
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,863
Number of Sequences: 438
Number of extensions: 4075
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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