BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1860
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 28 0.081
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 28 0.081
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 26 0.43
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 24 1.3
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 24 1.8
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 24 1.8
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 24 1.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 3.1
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 23 3.1
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 3.1
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 23 3.1
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 23 4.0
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 23 4.0
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 5.3
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 7.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 7.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 9.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.3
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 9.3
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 9.3
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 28.3 bits (60), Expect = 0.081
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +2
Query: 398 NAKTYKDIVVPLVSHLIDSLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDD 577
+A T I +P H +D L+ D ++ + + ++ Y ILYD + + F +
Sbjct: 347 SAPTIDGIFLP--KHPLDLLREADFKDTEILIGNNENEGTYFILYDFNDIFEKDQASFLE 404
Query: 578 KERYNNIPTIKTGYESFDKYEDQIIS 655
+ER+ I I +++ + E + I+
Sbjct: 405 RERFLGI--INNIFKNMSQIEREAIT 428
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 28.3 bits (60), Expect = 0.081
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +2
Query: 398 NAKTYKDIVVPLVSHLIDSLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDD 577
+A T I +P H +D L+ D ++ + + ++ Y ILYD + + F +
Sbjct: 347 SAPTIDGIFLP--KHPLDLLREADFKDTEILIGNNENEGTYFILYDFNDIFEKDQASFLE 404
Query: 578 KERYNNIPTIKTGYESFDKYEDQIIS 655
+ER+ I I +++ + E + I+
Sbjct: 405 RERFLGI--INNIFKNMSQIEREAIT 428
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.8 bits (54), Expect = 0.43
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 534 TLTSN*KTPTYTSTTRNATITSPPSRL 614
T T+ T T +TT+NA+ T+PP ++
Sbjct: 667 TTTTTTTTTTTPNTTQNASATTPPPQV 693
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 224 LGRGMAALALTGLLPAVLPNVCVKCTDA 307
+ + A ALTG P +LP C+ +A
Sbjct: 467 MAASVVAAALTGTYPTLLPQWCLPPREA 494
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 24.2 bits (50), Expect = 1.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 200 KDLHEACDLGR-GMAALALTGLLPAVLPNVCVKCT 301
K LH D G + + LLP VL N C +CT
Sbjct: 35 KQLHCILDRGHCDVIGKKIKELLPEVLNNHCNRCT 69
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 501 CPTRNTLTSVMCLLFR 454
CPTRN + CL +R
Sbjct: 261 CPTRNVKEMIRCLRYR 276
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 501 CPTRNTLTSVMCLLFR 454
CPTRN + CL +R
Sbjct: 132 CPTRNVKEMIRCLRYR 147
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 501 CPTRNTLTSVMCLLFR 454
CPTRN + CL +R
Sbjct: 261 CPTRNVKEMIRCLRYR 276
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 23.0 bits (47), Expect = 3.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 251 LTGLLPAVLPNVCVKCTDADKPRDIGDSYEFKVPNK 358
L +LP L C KCTD + I +F V NK
Sbjct: 64 LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 23.0 bits (47), Expect = 3.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 251 LTGLLPAVLPNVCVKCTDADKPRDIGDSYEFKVPNK 358
L +LP L C KCTD + I +F V NK
Sbjct: 64 LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 23.0 bits (47), Expect = 3.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 251 LTGLLPAVLPNVCVKCTDADKPRDIGDSYEFKVPNK 358
L +LP L C KCTD + I +F V NK
Sbjct: 64 LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 23.0 bits (47), Expect = 3.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -1
Query: 486 TLTSVMCLLFRLSIKCDTSGTTISL*VFALDSVVSTDRIISACLLGTL 343
T+T VMC F S + SL A + + +D + + C L L
Sbjct: 15 TITIVMCQTFTYSHGWTNGKRSTSLEELANRNAIQSDNVFANCELQKL 62
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = -2
Query: 740 VLTXKI-EPTNCLLVRCGEI 684
V+ KI EP C ++CG+I
Sbjct: 124 VMEIKIREPVECKCIKCGDI 143
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = -2
Query: 740 VLTXKI-EPTNCLLVRCGEI 684
V+ KI EP C ++CG+I
Sbjct: 124 VMEIKIREPVECKCIKCGDI 143
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 22.2 bits (45), Expect = 5.3
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = +2
Query: 131 SLFMDMSPFRQACIHAVTGTDAAKDLHEACDLGRGMAALALTGLLPAVLPNVCVKCTDAD 310
S++ ++SP + C G L + C G LAL A P + C
Sbjct: 6 SMYNNVSPLQ--CTSPFLG---GPQLTDVCSASNGELFLALLNFFVATSPVIGEPCQRVH 60
Query: 311 KPRDIGDSYEFKV 349
R SY+F V
Sbjct: 61 SSRIPDLSYDFIV 73
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 196 GVCAGDGVNTRLSERRHVHEQ*QGPERRYSPEDLFAGG 83
G+ A D LS R +GP+ +P + AGG
Sbjct: 37 GIWADDSDEEELSARPSFKTFDKGPKNYTTPVNFVAGG 74
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 55 SPAARCIPPPRL 90
+P RC PPPR+
Sbjct: 1696 APNRRCPPPPRM 1707
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 29 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 86
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 87 SLSNNYNYNN 96
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 29 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 86
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 87 SLSNNYNYNN 96
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 29 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 86
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 87 SLSNNYNYNN 96
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 29 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 86
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 87 SLSNNYNYNN 96
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 29 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 86
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 87 SLSNNYNYNN 96
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 29 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 86
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 87 SLSNNYNYNN 96
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 29 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 86
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 87 SLSNNYNYNN 96
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 29 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 86
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 87 SLSNNYNYNN 96
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 29 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 86
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 87 SLSNNYNYNN 96
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 262 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 319
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 320 SLSNNYNYNN 329
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.3
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 488 FLVGHTSKYPYPILYDTDLKL-KNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISXIN 664
FL TS+ Y + + KL KN + +E +T E E +IIS N
Sbjct: 262 FLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERER--SKEPKIISNNN 319
Query: 665 DLKNTYGFHH 694
L N Y +++
Sbjct: 320 SLSNNYNYNN 329
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 669 KSLMXLMIWSSYLSKDSYPVLMVGMLL*RSLSSKCTWAFFSLRSVSYKIG 520
K L L+ W+ ++ + L +LL R+ ++ A FS RS+ K G
Sbjct: 240 KQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDVKDG 289
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 669 KSLMXLMIWSSYLSKDSYPVLMVGMLL*RSLSSKCTWAFFSLRSVSYKIG 520
K L L+ W+ ++ + L +LL R+ ++ A FS RS+ K G
Sbjct: 240 KQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDVKDG 289
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,637
Number of Sequences: 438
Number of extensions: 5759
Number of successful extensions: 35
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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