Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1666
(760 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 1.0
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 3.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 4.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 4.1
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 23 4.1
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 22 5.4
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 7.2
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 7.2
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 7.2
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 7.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.5
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.6 bits (51), Expect = 1.0
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -2
Query: 684 SNSTWNQ-TKPLFQQNNCSVNGGRLLCSHEYNKVYRDARPPQ 562
SN +W T +Q V G+L+ HE N A PPQ
Sbjct: 1076 SNGSWTAGTVSQQKQKRRMVKYGKLVMIHEENAPLPPALPPQ 1117
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 611 NNRPPLTEQLFCWNNG 658
N +P TE +FC NNG
Sbjct: 32 NKKPLPTECVFCRNNG 47
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = -2
Query: 723 FNNIKCVLSSLRVSNSTWNQTKPLFQQNNCSVNGGRLL 610
+N + + +L++ + T ++ F+Q + ++N G LL
Sbjct: 439 YNKDEIIYPNLKIESFTVDKLITYFEQFDTTINNGLLL 476
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = -2
Query: 723 FNNIKCVLSSLRVSNSTWNQTKPLFQQNNCSVNGGRLL 610
+N + + +L++ + T ++ F+Q + ++N G LL
Sbjct: 439 YNKDEIIYPNLKIESFTVDKLITYFEQFDTTINNGLLL 476
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.6 bits (46), Expect = 4.1
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 678 STWNQTKPLFQQNNCSVNGGRLLCS-HEYNKVYRDARPPQRGPQRMHGVRFSGQLRALQV 502
S+ ++ + ++ ++ SV G + E N+ +RD R P GV G++ +Q+
Sbjct: 327 SSLDEIRTRYKDSSSSVEGWENRATIPELNEEFRDLRLQDLRPLATLGVGGFGRVELVQI 386
Query: 501 A 499
A
Sbjct: 387 A 387
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 582 RDARPPQRGPQRMHGVRFSG 523
R A + GPQR+H VR G
Sbjct: 31 RPAANTKLGPQRIHTVRTRG 50
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 129 PRGREPGTDRALTRLLGY 182
P EPGT LTR GY
Sbjct: 179 PEELEPGTPCQLTRRQGY 196
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 129 PRGREPGTDRALTRLLGY 182
P EPGT LTR GY
Sbjct: 179 PEELEPGTPCQLTRRQGY 196
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 629 LTAAGCCVRTNTTK 588
LTAA C + NTTK
Sbjct: 199 LTAAHCIIDENTTK 212
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 129 PRGREPGTDRALTRLLGY 182
P EPGT LTR GY
Sbjct: 179 PEELEPGTPCQLTRRQGY 196
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 94 ESTRPTDPSGPPQGAGNRGPTAL*LD 171
+S P P+ PP + GP + LD
Sbjct: 334 DSDTPPKPAPPPPPPSSSGPDSAKLD 359
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,580
Number of Sequences: 438
Number of extensions: 4788
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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