Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1657
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    23   1.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   6.2  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   8.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   8.2  

>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 58

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 353 EDRPVRSILSPPPQPLDID 409
           E +P   ILSP  +PLD D
Sbjct: 15  EQQPSGDILSPSSEPLDND 33


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 353 EDRPVRSILSPPPQPLDID 409
           E +P   ILSP  +PLD D
Sbjct: 15  EQQPSGDILSPSSEPLDND 33


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 63  CLDRTCYRRGQRTQTPRNTERSS*IDQDRTI 155
           CLD +  RRG +  +P   E S+ I ++R I
Sbjct: 645 CLDASSSRRGSKIGSPTPAE-STFIPEERRI 674


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 413 SGRCPGAAAAATVSNGPGGLP 351
           SG     AAAA  + G GG+P
Sbjct: 560 SGPVAAVAAAAVAAAGVGGVP 580


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 279 NSERASXRAHVQREAEVPHASL 214
           NS+ A    HVQ EAE  HA++
Sbjct: 342 NSQNALVLRHVQAEAE-KHAAM 362


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
          protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 41 TNXQCAPVLGPNLL 82
          TN  C P  GPN++
Sbjct: 41 TNAFCLPFCGPNVI 54


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
          protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 41 TNXQCAPVLGPNLL 82
          TN  C P  GPN++
Sbjct: 40 TNAFCLPFCGPNVI 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.128    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,142
Number of Sequences: 438
Number of extensions: 3056
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)