Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1495
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.62 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   4.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -1

Query: 617 GSVGPWNQTVSSAPRGTQVCRCGHF*EIYVQQWT 516
           G V  WN TVSS  R T+        E Y+  WT
Sbjct: 10  GDVYQWNHTVSSGERDTRT-------EYYLPNWT 36


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 514 VWADDKVDVIVECR*NFKIFRK 449
           +WADD  +  +  R +FK F K
Sbjct: 38  IWADDSDEEELSARPSFKTFDK 59


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 148 FRSAHGGQQCRLLCCQSVCLSA 83
           F S H G   + LC   VCL +
Sbjct: 27  FDSLHAGNAEKTLCSGQVCLGS 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,860
Number of Sequences: 438
Number of extensions: 4769
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)