Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1175
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.52
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.1
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.1
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 2.8
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 4.9
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 4.9
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 4.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 8.5
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.4 bits (53), Expect = 0.52
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = -3
Query: 497 VIETQRMSQRPTGILWHLXSNRRL 426
V++ + ++P GILW++ +N+RL
Sbjct: 795 VLQCEAQGEKPIGILWNM-NNKRL 817
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.4 bits (48), Expect = 2.1
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = -1
Query: 328 GMKIMGTKIVLESIACHTKCVMRLIGS*LRDACARQSGANXAAALSQVTPGCCAGSPPQS 149
G K M + E CH +C+ RL + D A + + ++T G +G
Sbjct: 466 GDKYMAVSGLPEPCRCHARCIARLALD-MMDLAADEVQIDGEPV--KITIGIHSGEVVTG 522
Query: 148 LVLIARFSHYCIF 110
V+ R YC+F
Sbjct: 523 -VIGHRMPRYCLF 534
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.4 bits (48), Expect = 2.1
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = -1
Query: 328 GMKIMGTKIVLESIACHTKCVMRLIGS*LRDACARQSGANXAAALSQVTPGCCAGSPPQS 149
G K M + E CH +C+ RL + D A + + ++T G +G
Sbjct: 466 GDKYMAVSGLPEPCRCHARCIARLALD-MMDLAADEVQIDGEPV--KITIGIHSGEVVTG 522
Query: 148 LVLIARFSHYCIF 110
V+ R YC+F
Sbjct: 523 -VIGHRMPRYCLF 534
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 469 LWLIRCVSITCVGVTMMSIGTSCGPNNSAGSVS 567
L L+ C+ I C G+T +++ + P A S++
Sbjct: 5 LLLVVCLGIACQGITSVTVREN-SPRKLANSMN 36
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 337 IYVNRFLRSKLQLAYSISISLSCP 408
+Y+ F + + IS++LSCP
Sbjct: 138 VYIRIFPNGSVLYSIRISLTLSCP 161
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 337 IYVNRFLRSKLQLAYSISISLSCP 408
+Y+ F + + IS++LSCP
Sbjct: 138 VYIRIFPNGSVLYSIRISLTLSCP 161
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 647 EFGLMMHMKAIKPDTVVVTTVHDCQVFDTLPAEL 546
E M+ K ++ + TTVH + +T+P EL
Sbjct: 306 EVNYMLKAKNMENRFPLFTTVHRICIGETMPMEL 339
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 531 RSYRHHSDAHTGYRDAAYEPKTHW 460
RS++ S H+ Y D+ +E + +
Sbjct: 222 RSFQRTSSCHSRYEDSRHEDRNSY 245
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 531 RSYRHHSDAHTGYRDAAYEPKTHW 460
RS++ S H+ Y D+ +E + +
Sbjct: 222 RSFQRTSSCHSRYEDSRHEDRNSY 245
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 531 RSYRHHSDAHTGYRDAAYEPKTHW 460
RS++ S H+ Y D+ +E + +
Sbjct: 222 RSFQRTSSCHSRYEDSRHEDRNSY 245
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 531 RSYRHHSDAHTGYRDAAYEPKTHW 460
RS++ S H+ Y D+ +E + +
Sbjct: 222 RSFQRTSSCHSRYEDSRHEDRNSY 245
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 531 RSYRHHSDAHTGYRDAAYEPKTHW 460
RS++ S H+ Y D+ +E + +
Sbjct: 222 RSFQRTSSCHSRYEDSRHEDRNSY 245
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 531 RSYRHHSDAHTGYRDAAYEPKTHW 460
RS++ S H+ Y D+ +E + +
Sbjct: 222 RSFQRTSSCHSRYEDSRHEDRNSY 245
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 493 ITCVGVTMMSIGTSCGPNNSAGSVS 567
I CVG+T +++ P++S VS
Sbjct: 258 IPCVGITFLTVLVFYLPSDSGEKVS 282
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,208
Number of Sequences: 438
Number of extensions: 3920
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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