Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1123
(368 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U22377-1|AAC50396.1| 1914|Homo sapiens RLF protein. 31 0.88
BC113666-1|AAI13667.1| 1914|Homo sapiens rearranged L-myc fusion... 31 0.88
AL929567-1|CAH71081.1| 1914|Homo sapiens rearranged L-myc fusion... 31 0.88
AL512599-18|CAI11028.1| 1914|Homo sapiens rearranged L-myc fusio... 31 0.88
AL356424-1|CAI21999.1| 1914|Homo sapiens rearranged L-myc fusion... 31 0.88
AL050341-8|CAB81608.2| 1914|Homo sapiens rearranged L-myc fusion... 31 0.88
AB209099-1|BAD92336.1| 1608|Homo sapiens rearranged L-myc fusion... 31 0.88
X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein. 29 4.7
BC029657-1|AAH29657.1| 170|Homo sapiens C6orf128 protein protein. 29 6.2
AB065531-1|BAC05778.1| 235|Homo sapiens seven transmembrane hel... 29 6.2
>U22377-1|AAC50396.1| 1914|Homo sapiens RLF protein.
Length = 1914
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 295 HLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHI-AFSKCNSQNISRERSNKRSKMSLV 122
+L YI +K++K + C T + + L++H + N + + E+ R+K LV
Sbjct: 1298 NLCYILNKYHKPFHCIHKTCNSSFTNLKGLIRHYRTVHQYNKEQLCLEKDKARTKRELV 1356
>BC113666-1|AAI13667.1| 1914|Homo sapiens rearranged L-myc fusion
protein.
Length = 1914
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 295 HLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHI-AFSKCNSQNISRERSNKRSKMSLV 122
+L YI +K++K + C T + + L++H + N + + E+ R+K LV
Sbjct: 1298 NLCYILNKYHKPFHCIHKTCNSSFTNLKGLIRHYRTVHQYNKEQLCLEKDKARTKRELV 1356
>AL929567-1|CAH71081.1| 1914|Homo sapiens rearranged L-myc fusion
protein.
Length = 1914
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 295 HLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHI-AFSKCNSQNISRERSNKRSKMSLV 122
+L YI +K++K + C T + + L++H + N + + E+ R+K LV
Sbjct: 1298 NLCYILNKYHKPFHCIHKTCNSSFTNLKGLIRHYRTVHQYNKEQLCLEKDKARTKRELV 1356
>AL512599-18|CAI11028.1| 1914|Homo sapiens rearranged L-myc fusion
protein.
Length = 1914
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 295 HLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHI-AFSKCNSQNISRERSNKRSKMSLV 122
+L YI +K++K + C T + + L++H + N + + E+ R+K LV
Sbjct: 1298 NLCYILNKYHKPFHCIHKTCNSSFTNLKGLIRHYRTVHQYNKEQLCLEKDKARTKRELV 1356
>AL356424-1|CAI21999.1| 1914|Homo sapiens rearranged L-myc fusion
protein.
Length = 1914
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 295 HLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHI-AFSKCNSQNISRERSNKRSKMSLV 122
+L YI +K++K + C T + + L++H + N + + E+ R+K LV
Sbjct: 1298 NLCYILNKYHKPFHCIHKTCNSSFTNLKGLIRHYRTVHQYNKEQLCLEKDKARTKRELV 1356
>AL050341-8|CAB81608.2| 1914|Homo sapiens rearranged L-myc fusion
protein.
Length = 1914
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 295 HLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHI-AFSKCNSQNISRERSNKRSKMSLV 122
+L YI +K++K + C T + + L++H + N + + E+ R+K LV
Sbjct: 1298 NLCYILNKYHKPFHCIHKTCNSSFTNLKGLIRHYRTVHQYNKEQLCLEKDKARTKRELV 1356
>AB209099-1|BAD92336.1| 1608|Homo sapiens rearranged L-myc fusion
sequence variant protein.
Length = 1608
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 295 HLKYIYSKFNKKYQCRRDTNKRKYCLITSLVKHI-AFSKCNSQNISRERSNKRSKMSLV 122
+L YI +K++K + C T + + L++H + N + + E+ R+K LV
Sbjct: 992 NLCYILNKYHKPFHCIHKTCNSSFTNLKGLIRHYRTVHQYNKEQLCLEKDKARTKRELV 1050
>X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein.
Length = 6669
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 295 HLKYIYSKFN-KKYQCRRDTNKRKYCLITSLVKHIAFSKCNSQNISRERSNKRSKMS 128
H KY N KKY+ + K KY L+ +H+ +K S IS+ + K + S
Sbjct: 5393 HFKYATQLMNEKKYRADYEQRKDKYHLVVDEPRHL-LAKTRSDQISQIKYRKNYEKS 5448
>BC029657-1|AAH29657.1| 170|Homo sapiens C6orf128 protein protein.
Length = 170
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 174 ELHLLKAMCLTNDVIKQYFLLFVSRLHWYFLLNLL*MYFKCI 299
EL + L N +IK +F +S LHW F ++ + ++F C+
Sbjct: 97 ELINFSIVLLLNGIIKDHFKT-LSYLHWIFQISHMFLHFFCL 137
>AB065531-1|BAC05778.1| 235|Homo sapiens seven transmembrane helix
receptor protein.
Length = 235
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 132 IFDRLFDLSRLMFCELHLLK-AMCLTNDVIKQYFLLFVSRLH-WY-FLLNLL 278
+ LF L RL FC HLL + CL D+I+ + RL+ WY F L LL
Sbjct: 158 VLPSLFLLKRLPFCHSHLLSHSYCLHQDMIR--LVCADIRLNSWYGFALALL 207
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,250,083
Number of Sequences: 237096
Number of extensions: 728602
Number of successful extensions: 1106
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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