Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1093
         (530 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              33   0.002
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   0.84 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 33.1 bits (72), Expect = 0.002
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 340 PCLKVHCSAGRVCEINEHGD-AMCNCIKDCP 429
           PC   +C  G+ CE++ +   A+C C++ CP
Sbjct: 81  PCASKYCGIGKECELSPNSTIAVCVCMRKCP 111


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
 Frame = +1

Query: 370 RVCEINEHGDAMCNCIKDCP------YETDSRRMXCTNLNETW 480
           +VC    H D+ C C+           E+++RR  C    ET+
Sbjct: 344 QVCRSRRHSDSCCLCLDSMNAVIRNFNESENRRNSCLGSTETY 386


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +1

Query: 361 SAGRVCEINEHGDAMCNCIKDCPYETDSRRMXCTNL 468
           + G  C   EH       + DC  E  +RR  C  L
Sbjct: 296 TTGTKCVSGEHLSVSGGALNDCHAEVVARRCLCEYL 331


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 205 QPPRCPRGR 179
           QPP+CPR R
Sbjct: 564 QPPQCPRFR 572


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.127    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,346
Number of Sequences: 438
Number of extensions: 2004
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)