Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0885
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   1.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 174 HPDSQLFSCSKCTYT 130
           H  S+ F C+KC YT
Sbjct: 253 HAGSKPFQCNKCDYT 267


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 174 HPDSQLFSCSKCTYT 130
           H  S+ F C+KC YT
Sbjct: 11  HAGSKPFQCNKCDYT 25


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = +1

Query: 589 CRVPLITSQKEEQLLIMSTSKPVVKLLINRHNNKYSYTSTSDDNLLKNIEL 741
           C  P+I +  + ++L         KLLIN +   Y++  +  ++ +  ++L
Sbjct: 93  CSAPIIITILDIEILGYVNKAKFGKLLINLYTINYNFKESERNDYVSLLQL 143


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 166 LSTIFLFQMYLYYILCSFNTI 104
           L  +  FQMY  +I+ +FN++
Sbjct: 429 LYAVEYFQMYAQFIVGTFNSV 449


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 662 FTTGLEVDIIKSCSSFCEVIK 600
           F T LE+    +CS +C V K
Sbjct: 266 FNTVLELMPKHACSEYCRVFK 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,281
Number of Sequences: 336
Number of extensions: 3638
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)