Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0885
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 268 3e-72
SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_23998| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18) 65 5e-11
SB_47716| Best HMM Match : K_tetra (HMM E-Value=1.5e-17) 63 2e-10
SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18) 54 9e-08
SB_50701| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 38 0.009
SB_53072| Best HMM Match : K_tetra (HMM E-Value=8.2e-31) 36 0.027
SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.035
SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.035
SB_11146| Best HMM Match : K_tetra (HMM E-Value=1.1e-34) 35 0.061
SB_43248| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_18562| Best HMM Match : K_tetra (HMM E-Value=9.8e-36) 34 0.11
SB_18563| Best HMM Match : K_tetra (HMM E-Value=4.34403e-44) 31 1.00
SB_57508| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_54640| Best HMM Match : TolA (HMM E-Value=1.7) 31 1.00
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 30 1.7
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_42912| Best HMM Match : K_tetra (HMM E-Value=7.20267e-43) 30 2.3
SB_14698| Best HMM Match : E1_DerP2_DerF2 (HMM E-Value=4.1e-31) 30 2.3
SB_43724| Best HMM Match : AMP-binding (HMM E-Value=2.6e-09) 29 3.0
SB_14327| Best HMM Match : NHL (HMM E-Value=0) 29 5.3
SB_11652| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 9.3
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 28 9.3
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 268 bits (657), Expect = 3e-72
Identities = 124/177 (70%), Positives = 147/177 (83%), Gaps = 2/177 (1%)
Frame = +1
Query: 226 MSGD--HKTLLKGSPSQYVKLNVGGTLFYTTIGTLTKSDNMLRTMFSGRMEVLTDSEGWI 399
MSG+ H T ++GSP++YVKLNVGG+L YTT+GTLTK DNMLR MFSGRMEVLTDS+GWI
Sbjct: 1 MSGEASHATTIRGSPTKYVKLNVGGSLHYTTLGTLTKHDNMLRAMFSGRMEVLTDSDGWI 60
Query: 400 LIDRCGKHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREA 579
LIDRCGKHFGTILN+LRDG++ LP E+ EL E+KY+LIE+L C LAKK+++
Sbjct: 61 LIDRCGKHFGTILNFLRDGSIPLPQCESELRELCTESKYYLIEQLVNQCEALLAKKQQQH 120
Query: 580 EPICRVPLITSQKEEQLLIMSTSKPVVKLLINRHNNKYSYTSTSDDNLLKNIELFDK 750
+PICRVPLITS KEE+LL+ + SKP+VKL NR NNKYSYT SDDNLLKNIELFDK
Sbjct: 121 DPICRVPLITSTKEERLLVSTASKPIVKLSYNRSNNKYSYTGQSDDNLLKNIELFDK 177
>SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 83.0 bits (196), Expect = 2e-16
Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTK-SDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLR 450
+ LNVGG F TT+ TLT D+ML +MFSGR+ V DS G IDR G F ILN+LR
Sbjct: 277 IDLNVGGNHFTTTLLTLTTFPDSMLGSMFSGRIPVNRDSNGRFFIDRDGTLFRYILNFLR 336
Query: 451 DGTVALPDSYKEIMELLAEAKYFLIEELTESC--LQALAKKEREAEPICRV 597
++LP ++K+ LL EA ++ IE L E +Q+ K + EPI V
Sbjct: 337 SNVLSLPANFKDYELLLNEADFYQIEPLIEEIKRIQSNLAKTKMTEPISEV 387
>SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 79.0 bits (186), Expect = 4e-15
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTKS-DNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLR 450
V LNVGG ++ T+ TLT+ D+ML MFSGR + D+ G IDR G F ILN+LR
Sbjct: 9 VNLNVGGYVYTTSYKTLTRCRDSMLGAMFSGRQNLARDTRGNFFIDRDGSLFRYILNFLR 68
Query: 451 DGTVALPDSYKEIMELLAEAKYFLIEELTES 543
+ LPDS+ E +L EA ++ IE+L ++
Sbjct: 69 TSELCLPDSFDEFQQLSLEADFYQIEDLIKA 99
>SB_23998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 727
Score = 75.8 bits (178), Expect = 4e-14
Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTKS-DNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLR 450
V LNVGG F T + TLTK D+ML +MFSGR + DSEG IDR G +F +LNYLR
Sbjct: 83 VTLNVGGHFFTTRLSTLTKDQDSMLASMFSGRFNLDVDSEGRFFIDRDGTYFVFLLNYLR 142
Query: 451 DGTVALPDSYKEIMELLAEAKYFLIEEL 534
D + P S M++ EA+Y+ IE L
Sbjct: 143 DPSQLPPASV--AMQVYREAQYYRIEGL 168
>SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18)
Length = 307
Score = 65.3 bits (152), Expect = 5e-11
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTK-SDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLR 450
V LNVGG + +T TLT+ ++L M +G + V D +G IDR G F IL +LR
Sbjct: 85 VSLNVGGYNYTSTAYTLTQYPKSVLAQMCNGIIPVPRDLKGQQFIDRDGATFRYILTFLR 144
Query: 451 DGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAE 582
G + +P+ YK ELL EA+++ +E L E + + E+ E
Sbjct: 145 TGKLTVPEGYKYFRELLTEAEFYRLEPLVELIKGKIKEGEKAKE 188
>SB_47716| Best HMM Match : K_tetra (HMM E-Value=1.5e-17)
Length = 271
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTK-SDNMLRTMFSGRM-EVLTDSEGWILIDRCGKHFGTILNYL 447
++LNVGG F T++ TLT+ D++L +FSGR E+ D+ G IDR G F IL+YL
Sbjct: 38 IELNVGGKYFSTSVFTLTRIKDSLLGRIFSGRQSELDKDNSGKYFIDRDG--FLYILDYL 95
Query: 448 RDGTVALPDSYKEIMELLAEAKYFLIEELTE 540
R + +P+ + EI L EA ++ +E+L +
Sbjct: 96 RSKALHIPEKFDEIERLKMEADFYELEDLRQ 126
>SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 62.5 bits (145), Expect = 4e-10
Identities = 36/108 (33%), Positives = 61/108 (56%)
Frame = +1
Query: 268 QYVKLNVGGTLFYTTIGTLTKSDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYL 447
+ VKLN+GG+ F +T+ TLT+ + + + D + +DR K F +LN++
Sbjct: 2 ELVKLNIGGSEFVSTLQTLTRRQSWFSVTDAYKKSPSGDYYT-LFLDRDPKVFRHVLNFI 60
Query: 448 RDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPIC 591
RD ++LP+++KE LL EA Y+ IE + E + + R+AE +C
Sbjct: 61 RDERLSLPENFKEYELLLREATYYQIEGIRE---EIFKHRARQAEIVC 105
>SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18)
Length = 495
Score = 54.4 bits (125), Expect = 9e-08
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTKSDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRD 453
V LN+GG F + TL + L ++ ++G I+R KHF ILN++R
Sbjct: 18 VHLNIGGKHFTVSRRTLMDDSSTLFHALLSSPKIKPQADGCYFINRDPKHFRYILNFIRT 77
Query: 454 GTVALPDSYKEIMELLAEAKYF----LIEELTE 540
G LP+ K + E+L EA+++ L+E LT+
Sbjct: 78 GIANLPEDAKSLNEILLEARFYPASGLLEHLTQ 110
>SB_50701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +1
Query: 349 TMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIE 528
+MFSGR ++ DS G IDR G F IL+YLR+ +ALP+ + E L EA++F ++
Sbjct: 114 SMFSGRQKIPRDSRGRFFIDRDGVLFRYILDYLRNCKLALPEGFNERERLTMEAEHFKLK 173
Query: 529 ELTES 543
+ +
Sbjct: 174 GMVRA 178
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 364 RMEVLTDSEGWILIDRCGKHFGTILNYLRDGTVA--LPDSYKEIMELLAEAKYFLIEELT 537
R ++ S+ +DR G HF ILNYLRDG +A P + E+ EA ++ + L
Sbjct: 115 RFKLKQASDESYFLDRDGTHFRHILNYLRDGFLAETFPTDEVILKEIQQEANFYQLTGLI 174
Query: 538 ES 543
+S
Sbjct: 175 DS 176
>SB_53072| Best HMM Match : K_tetra (HMM E-Value=8.2e-31)
Length = 414
Score = 36.3 bits (80), Expect = 0.027
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTKSDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLR- 450
V++NV GT F T + TLT+ L S R + D+ +R F +IL Y +
Sbjct: 5 VRINVSGTTFETRLSTLTRFPRTLLGSHSKRQKHYNDTLQEFYFNRHRLAFESILFYYQS 64
Query: 451 DGTVALPDSYKEIMELLAEAKYF-LIEELTESCLQALAKKEREAEP 585
+G + LPD E ++F L E+ S Q + EP
Sbjct: 65 NGRLILPDEV-PFRVFTEEVEFFELGEDALNSISQGMLPNTIRKEP 109
>SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 548
Score = 35.9 bits (79), Expect = 0.035
Identities = 22/92 (23%), Positives = 41/92 (44%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTKSDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRD 453
V + V G FY L + R MFS +S+ IL + +LN++
Sbjct: 52 VTIVVNGKPFYAHRNVLAAASPYFRAMFSSHFREQNESKPVILENITADVMEELLNFIYA 111
Query: 454 GTVALPDSYKEIMELLAEAKYFLIEELTESCL 549
GT+ + + +L++ + Y L+ L ++C+
Sbjct: 112 GTIKITPF--NVKDLVSASNYLLMNSLKDACV 141
>SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 570
Score = 35.9 bits (79), Expect = 0.035
Identities = 22/92 (23%), Positives = 41/92 (44%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTKSDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRD 453
V + V G FY L + R MFS +S+ IL + +LN++
Sbjct: 52 VTIVVNGKPFYAHRNVLAAASPYFRAMFSSHFREQNESKPVILENITADVMEELLNFIYA 111
Query: 454 GTVALPDSYKEIMELLAEAKYFLIEELTESCL 549
GT+ + + +L++ + Y L+ L ++C+
Sbjct: 112 GTIKITPF--NVKDLVSASNYLLMNSLKDACV 141
>SB_11146| Best HMM Match : K_tetra (HMM E-Value=1.1e-34)
Length = 336
Score = 35.1 bits (77), Expect = 0.061
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Frame = +1
Query: 229 SGDHKTLLKGSPSQYVKLNVGGTLFYTTIGTLTKSDN-MLRTMFSGRMEVLTDSEGWILI 405
+ D+ + + + LNVGG +F L + N +L ++ G+ E
Sbjct: 56 TADNNSFFGPQRRKRIALNVGGRVFVVRTHLLDRFPNSLLGSLQIGQFYDKNKQE--FFF 113
Query: 406 DRCGKHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLI---EELTESCLQALAKKERE 576
DR F ILNYLR G + + D + LL E ++F I + L ++C Q K E
Sbjct: 114 DRDPDVFRYILNYLRSGRLHVSDE-ECFNSLLDELEFFHIPTEDILQDTCCQEYYGKNCE 172
Query: 577 AEPICR 594
E +C+
Sbjct: 173 -EVLCK 177
>SB_43248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 34.7 bits (76), Expect = 0.081
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 382 DSEGWILIDRCGKHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALA 561
D + +IDR ++F +LNYLR G + + E +L EA+++ IE L + + +
Sbjct: 513 DEDDAYMIDRDPRYFFPVLNYLRHGKLIIDRDLHE-EGVLEEAEFYSIEPLVKMIKERIE 571
Query: 562 KKE 570
+E
Sbjct: 572 ARE 574
>SB_18562| Best HMM Match : K_tetra (HMM E-Value=9.8e-36)
Length = 407
Score = 34.3 bits (75), Expect = 0.11
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTK-SDNMLRTMFSGRMEVLTDSE-GWILIDRCGKHFGTILNYL 447
V +N GG F + TL +D L + ++++ D E G DR F +LNYL
Sbjct: 28 VVINCGGKRFEPYLSTLKNITDLPLSKITENKIKLDYDEESGEYFFDRHPAVFAQVLNYL 87
Query: 448 RDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAE 582
+ G + P + + A + + E+ ESC + K R+A+
Sbjct: 88 QTGKLHCPRNVCGPLFEQELAYWGIDEQQMESCCWSNYTKHRDAQ 132
>SB_18563| Best HMM Match : K_tetra (HMM E-Value=4.34403e-44)
Length = 191
Score = 31.1 bits (67), Expect = 1.00
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +1
Query: 250 LKGSPSQYVKLNVGGTLFYTTIGTL-TKSDNMLRTM-FSGRMEVLTDSE-GWILIDRCGK 420
++GS V LNVGG T + TL D+ L + + + D E I DR
Sbjct: 22 VRGSGKDRVILNVGGYRHETYLSTLRVVPDSRLAWIGENASKQADYDPETNEIFFDRHPG 81
Query: 421 HFGTILNYLRDGTVALP-DSYKEIMELLAEAKYFLIEEL-TESCLQALAKKEREAE 582
F +LNY R G + P D + E E ++ IEEL E C + + R+A+
Sbjct: 82 VFANVLNYYRTGKLHCPGDVCGPLFE--EELAFWGIEELQMEPCCWSNYTQHRDAQ 135
>SB_57508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1215
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -1
Query: 435 NSTEMLPTTINQNPPFRICENL-HPPTKHGS 346
NST++LP+T Q+ F+I + L +PPTK G+
Sbjct: 504 NSTKVLPSTYLQSASFKIEQTLMNPPTKGGA 534
>SB_54640| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 589
Score = 31.1 bits (67), Expect = 1.00
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Frame = +1
Query: 418 KHFGTILNYLRDGTVALPDSYKEIMELL-AEAK--------YFLIEELTESCLQALAKKE 570
K +ILN RDGT + D Y + EL ++A+ +++ +E ++ L+++ KKE
Sbjct: 376 KMLTSILNGCRDGTKSFDDLYSDANELHGSDARECERKIGAFYVTKETLKTELESVMKKE 435
Query: 571 REAEPICRV 597
P+CRV
Sbjct: 436 -NLSPVCRV 443
>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1230
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Frame = +1
Query: 418 KHFGTILNYLRDGTVALPDSYKEIMELL-AEAK--------YFLIEELTESCLQALAKKE 570
K +ILN RDGT + + Y + L +EA+ +++ +E ++ L+ + KKE
Sbjct: 361 KMLTSILNGCRDGTKSFDELYSDATSLFGSEARRCERKIGAFYVTKETLKTKLETVMKKE 420
Query: 571 REAEPICRV 597
P+CRV
Sbjct: 421 -NLSPVCRV 428
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 234 SRHYFKTKK*HQRDNTKRPVHPDSQLFSCSKCTYTTFCA 118
+RHYFK +K + + KR + + C+ C + CA
Sbjct: 477 NRHYFKNRKYFRNNVVKRDANLNKLSVKCATCRWVEQCA 515
>SB_42912| Best HMM Match : K_tetra (HMM E-Value=7.20267e-43)
Length = 523
Score = 29.9 bits (64), Expect = 2.3
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTK-SDNMLR--TMFSGRMEVLTDSEGWILIDRCGKHFGTILNY 444
V +NVGG T IGTL D L T ++ + DR F +LN+
Sbjct: 285 VVINVGGQKHETYIGTLKNIPDTRLYWITENGTQLPEFDPNTSEFFFDRHPGVFAQVLNF 344
Query: 445 LRDGTVALP-DSYKEIMELLAEAKYFLIEEL-TESCLQALAKKEREAE 582
R G + P D + E E ++ I+EL E C K+ REA+
Sbjct: 345 YRTGKLHCPNDVCGPLFE--DELAFWGIDELQVEPCCWLNYKQHREAQ 390
>SB_14698| Best HMM Match : E1_DerP2_DerF2 (HMM E-Value=4.1e-31)
Length = 167
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 88 LNDPTLWY*NCTKCSIGTFGTRK*LRVRVYWSFRIIALMLFLRFEIMSGDHKTLLKGSPS 267
L +P + + KC I G L + +Y S +L L ++FE+ GD+K + G S
Sbjct: 88 LKNPNVCENHGVKCPINA-GDSATLDLNIYVSNLYPSLKLIIKFELKGGDNKLVFCGEFS 146
Query: 268 QYVK 279
+K
Sbjct: 147 AQIK 150
>SB_43724| Best HMM Match : AMP-binding (HMM E-Value=2.6e-09)
Length = 490
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 382 DSEGWILIDRCGKHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALA 561
D +GW+ H G + + +GT+ L D K I +L + + ++EE++ A+
Sbjct: 318 DEDGWL-------HSGDVGEWTENGTLKLIDRKKHIFKLAQKVRKAILEEMS-----AMG 365
Query: 562 KKER 573
KKE+
Sbjct: 366 KKEK 369
>SB_14327| Best HMM Match : NHL (HMM E-Value=0)
Length = 725
Score = 28.7 bits (61), Expect = 5.3
Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 2/110 (1%)
Frame = +1
Query: 424 FGTILNYLRDGTVALPDSYK--EIMELLAEAKYFLIEELTESCLQALAKKEREAEPICRV 597
+G +L L +G PD + E A L EE C + E A+ ICR
Sbjct: 120 YGDLLRILNNGQRIAPDKLELWESESPTARKSLGLCEE--HDCEEMKFYCESCAKGICRD 177
Query: 598 PLITSQKEEQLLIMSTSKPVVKLLINRHNNKYSYTSTSDDNLLKNIELFD 747
+ S K + + KP R N + NL + +EL +
Sbjct: 178 CAVLSHKTHEFVYYKDHKPASPQTRERFNKILTQVEKKKKNLEEKMELLE 227
>SB_11652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 370 EVLTDSEGWILIDRCGKHFGTILNYLRDGTVALPDSYK--EIMEL 498
E+ D WI +DRCG+H I++Y G D+YK E +EL
Sbjct: 155 ELPFDRHDWI-VDRCGRHVRYIIDYYDVGD---EDAYKTGEFVEL 195
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTKSDNMLRTMFSGRMEVLTDSEGWILIDRCG-KHFGTILNYLR 450
V LNV LF+ L S R +F+ M +E I ++ + IL YL
Sbjct: 28 VTLNVNEVLFHAHRNILAASSPYFRALFTSEMRENQGNE--IKLNNVDVEIMEDILAYLY 85
Query: 451 DGTVALPDSYKEIMELLAEAKYFLIEELTE 540
G+V + +S + + L A Y L+ +L +
Sbjct: 86 SGSVVVEES--KAIPLTVAADYMLLPKLKQ 113
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 27.9 bits (59), Expect = 9.3
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 1/142 (0%)
Frame = +1
Query: 328 KSDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGTVALPDSYKEIMELLAE 507
K+ N MF+ E DS LI + FG N++R V LPD+ I+
Sbjct: 315 KNRNDSYIMFAADFEKAFDSIEHSLIYATLRQFGFGENFIRWIQVLLPDNVSSILNNDHA 374
Query: 508 AKYFLIEELTESCLQALAKKEREAEPICRVPLITSQKEEQLLIMSTSKPVVK-LLINRHN 684
+F L K ++ +P+ +P + E L IM S P VK L I +
Sbjct: 375 TTFF-----------QLGKGTKQGDPV--LPYLFILVLEVLAIMVRSSPEVKGLKIGKSE 421
Query: 685 NKYSYTSTSDDNLLKNIELFDK 750
K + + LK++ +K
Sbjct: 422 IKMTMFADDTTLFLKDMNSLEK 443
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,233,055
Number of Sequences: 59808
Number of extensions: 448126
Number of successful extensions: 1174
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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