Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0884
(700 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T8W5 Cluster: Chromosome undetermined SCAF7713, whole... 45 0.002
UniRef50_A0CAA4 Cluster: Chromosome undetermined scaffold_160, w... 42 0.015
UniRef50_Q9HH42 Cluster: Putative tail protein; n=1; Methanother... 39 0.10
UniRef50_A0DVT2 Cluster: Chromosome undetermined scaffold_66, wh... 38 0.18
UniRef50_Q4HLP0 Cluster: Flagellar hook-associated protein 1; n=... 36 0.72
UniRef50_Q7RKP6 Cluster: SEN1-related; n=4; Plasmodium (Vinckeia... 36 0.72
UniRef50_UPI0000F21390 Cluster: PREDICTED: hypothetical protein;... 36 0.96
UniRef50_Q22YX0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q22BX5 Cluster: Ubiquitin carrier protein; n=5; Tetrahy... 36 1.3
UniRef50_O17039 Cluster: Putative uncharacterized protein T15B7.... 36 1.3
UniRef50_Q1NDN7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q4UFJ9 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_A0CPM7 Cluster: Chromosome undetermined scaffold_23, wh... 35 1.7
UniRef50_UPI00004D80B1 Cluster: Heterogeneous nuclear ribonucleo... 35 2.2
UniRef50_O06023 Cluster: Lob1; n=3; Histophilus somni|Rep: Lob1 ... 35 2.2
UniRef50_A7DJD0 Cluster: Putative uncharacterized protein; n=3; ... 35 2.2
UniRef50_A3XZ18 Cluster: Putative membrane protein; n=1; Vibrio ... 35 2.2
UniRef50_Q4V3E9 Cluster: IP10431p; n=4; Sophophora|Rep: IP10431p... 34 2.9
UniRef50_A7T9V9 Cluster: Predicted protein; n=1; Nematostella ve... 34 2.9
UniRef50_A0EAD6 Cluster: Chromosome undetermined scaffold_86, wh... 34 2.9
UniRef50_Q2TAA8 Cluster: Translin-associated factor X-interactin... 34 2.9
UniRef50_P52272 Cluster: Heterogeneous nuclear ribonucleoprotein... 34 2.9
UniRef50_UPI0000382CAE Cluster: COG0840: Methyl-accepting chemot... 34 3.9
UniRef50_A4G348 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_A0TME6 Cluster: 63 kDa protein; n=4; Burkholderia|Rep: ... 34 3.9
UniRef50_Q23RX5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q9HMF6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q8I436 Cluster: Putative uncharacterized protein PFE032... 33 5.1
UniRef50_A0BJE7 Cluster: Chromosome undetermined scaffold_11, wh... 33 5.1
UniRef50_Q7RJJ2 Cluster: Putative uncharacterized protein PY0326... 33 6.7
UniRef50_Q4UHB4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A2E745 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A0DJC1 Cluster: Chromosome undetermined scaffold_53, wh... 33 6.7
UniRef50_Q9K967 Cluster: Exodeoxyribonuclease 7 large subunit; n... 33 6.7
UniRef50_UPI00006CD140 Cluster: Viral A-type inclusion protein r... 33 8.9
UniRef50_Q4KCD3 Cluster: Nonribosomal peptide synthase; n=1; Pse... 33 8.9
UniRef50_A0CUN1 Cluster: Chromosome undetermined scaffold_28, wh... 33 8.9
>UniRef50_Q4T8W5 Cluster: Chromosome undetermined SCAF7713, whole
genome shotgun sequence; n=18; Eukaryota|Rep: Chromosome
undetermined SCAF7713, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1170
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -2
Query: 282 SL*STVCPSLCTTLW-SILSKFCPNLCTMFWSNL-SILCPKRW 160
SL S++CPSLC +LW S+ C +LC W +L LCP W
Sbjct: 1006 SLCSSLCPSLCPSLWPSLCPSLCSSLCPSLWPSLWPSLCPSLW 1048
Score = 37.1 bits (82), Expect = 0.41
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 282 SL*STVCPSLCTTLWSIL-SKFCPNLCTMFWSNL 184
SL S++CPSLC +L S L CP+LC W +L
Sbjct: 1054 SLCSSLCPSLCPSLCSSLCPSLCPSLCPSLWPSL 1087
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -2
Query: 282 SL*STVCPSLCTTLW-----SILSKFCPNLCTMFWSNLSILCPKRWAKFKSIVWPN 130
SL ++ PSLC +LW S+ S CP+LC S S LCP +WP+
Sbjct: 1034 SLWPSLWPSLCPSLWPSLCPSLCSSLCPSLCP---SLCSSLCPSLCPSLCPSLWPS 1086
>UniRef50_A0CAA4 Cluster: Chromosome undetermined scaffold_160,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_160,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 427
Score = 41.9 bits (94), Expect = 0.015
Identities = 34/138 (24%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Frame = +2
Query: 8 QELMQAESRRIPVQDNQIIDHNLTQ-RWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIE 184
Q + Q E ++ +Q++ +I N Q + TQ ++ + ++ + ID Q+LG +
Sbjct: 227 QNINQFEEKQELIQESHVIPQNQPQIKQTQKIK------SNKMDKEIDCLQKQQLGGN-- 278
Query: 185 RLDQNIVHRLGQNLDRIDQSVVQRLGQTVD--QRLVGQDAGQQRLENEHIIPMQFHIKSE 358
+ +N++H Q+ + VQ+L QT+D + ++G D Q++ ++H + + +IK +
Sbjct: 279 QKFENLIHDQMQSQPQNSSDRVQQLSQTIDSKENVLGNDNQPQKVNSQHDVLNENNIK-Q 337
Query: 359 QEDDSYFYENPGQSLDSV 412
Q D +S +SV
Sbjct: 338 QSDQKDQANEQNESAESV 355
>UniRef50_Q9HH42 Cluster: Putative tail protein; n=1;
Methanothermobacter phage psiM100|Rep: Putative tail
protein - Methanothermobacter phage psiM100
Length = 1157
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 71 NLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLD-QNIVHRLGQNLDRIDQSV 247
+ Q++ ME + +A++L + L G++ +RLD ++ RLG NLD S+
Sbjct: 648 DFVQKFLNKMEDSLREVARKLWDRLKNLLRDEGGRAFDRLDVDGVITRLGTNLDDAASSI 707
Query: 248 VQRLGQTVDQRLV 286
+ R G ++ + LV
Sbjct: 708 LPRFGTSIGRTLV 720
>UniRef50_A0DVT2 Cluster: Chromosome undetermined scaffold_66, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_66,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 495
Score = 38.3 bits (85), Expect = 0.18
Identities = 26/87 (29%), Positives = 47/87 (54%)
Frame = -1
Query: 463 WELINISLLKSLTA*SVNTIQRLTWIFIKVTVIFLFGFNVELHRYYVFILQPLLTSILTH 284
+E++ + L + L V+ I + + IK+ F V L+R +I+ LL ++
Sbjct: 332 FEIVIVKLYQFLRFIIVDVIIK---VIIKIAEFIYFQICVNLYRCLTWIIIRLLYELILK 388
Query: 283 QSLIYGLPQPLYNTLVNPIQILSQSMY 203
+Y L QPL+N LV+ I+I++ S+Y
Sbjct: 389 NIYLYIL-QPLFNFLVSMIRIIATSLY 414
>UniRef50_Q4HLP0 Cluster: Flagellar hook-associated protein 1; n=12;
Campylobacter|Rep: Flagellar hook-associated protein 1 -
Campylobacter lari RM2100
Length = 609
Score = 36.3 bits (80), Expect = 0.72
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Frame = +2
Query: 167 LGQSIERLDQNIVHRLGQNLDRIDQSVVQRLGQTVDQ-RLVGQDAG--QQRLENEHIIP 334
L S L QNI L Q+LD++ Q+V +++ QTVD+ +GQ+ ++LENE ++P
Sbjct: 136 LVNSANVLAQNIQKTL-QDLDKMQQTVNEQIRQTVDEINNIGQEIANINKQLENEEVLP 193
>UniRef50_Q7RKP6 Cluster: SEN1-related; n=4; Plasmodium
(Vinckeia)|Rep: SEN1-related - Plasmodium yoelii yoelii
Length = 1139
Score = 36.3 bits (80), Expect = 0.72
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = -1
Query: 346 VELHRYYVFILQPLLTSILTHQSLIYGLPQPLYNTLVNPIQ 224
+ ++YY + + L+T+I QS+ PL+NT++NP++
Sbjct: 194 ITYNKYYAYFICSLITNIREFQSVYGSKSSPLFNTILNPVE 234
>UniRef50_UPI0000F21390 Cluster: PREDICTED: hypothetical protein; n=1;
Danio rerio|Rep: PREDICTED: hypothetical protein - Danio
rerio
Length = 2027
Score = 35.9 bits (79), Expect = 0.96
Identities = 26/111 (23%), Positives = 47/111 (42%)
Frame = +2
Query: 8 QELMQAESRRIPVQDNQIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIER 187
Q+ Q + ++ Q Q H Q Q + Q AQ++ Q +L Q+ Q ++
Sbjct: 1318 QQQHQQQQQQHQQQQQQSQQHQQQQHHQQQQSQQQQQKAQQIQQQ-QQSLQQQQQQQQQQ 1376
Query: 188 LDQNIVHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLENEHIIPMQ 340
+ H Q++ + Q Q G D+ Q AGQ+ +N H++ +
Sbjct: 1377 MPPQSSHSRHQHIQQQIQQ--QHFGARQDKNCEAQQAGQRAHQNNHLVQQE 1425
>UniRef50_Q22YX0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 5233
Score = 35.5 bits (78), Expect = 1.3
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 LDQELMQAESRRIPVQDNQIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSI 181
+D +++ E + + + I+ + + + +N D+S + +GQ I++ L Q + Q
Sbjct: 2521 MDSSILEKEEKGNTNEYSDIMTNPVMMNYQKNE---DKSQSFDMGQKINIQLNQNMSQ-- 2575
Query: 182 ERLDQNIVHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLEN--EHIIPMQFHIKS 355
ER++QN H L+ DQ + +G+ QD QQ++E + +PM + K
Sbjct: 2576 ERINQNPFHDFSNKLN--DQDQIFDMGKATS----FQDK-QQKIEQTFDMNMPMNLNTKK 2628
Query: 356 EQEDDS 373
+ DDS
Sbjct: 2629 DNIDDS 2634
>UniRef50_Q22BX5 Cluster: Ubiquitin carrier protein; n=5;
Tetrahymena thermophila SB210|Rep: Ubiquitin carrier
protein - Tetrahymena thermophila SB210
Length = 549
Score = 35.5 bits (78), Expect = 1.3
Identities = 26/140 (18%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Frame = +2
Query: 5 DQELMQAESRRIPVQDNQIIDHN--LTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQS 178
D E+ Q ++ + QD++I + L +W +E+ + + I+ N Q
Sbjct: 67 DDEIEQNQNDQNDQQDDEIEQNQIYLDDQWDDEIEQNQNDLNDQQDDEIEQNQINLNNQQ 126
Query: 179 IERLDQNIVHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLENEHIIPMQFHIKSE 358
+ ++QN + Q D I+Q+ + Q D+ Q+ + + E+ + H +
Sbjct: 127 DDEIEQNQNDQNDQQDDEIEQNQINLNNQQDDEIEQNQNDQNDQQDEENKLNSPQHGQPF 186
Query: 359 QEDDSYFYENPGQSLDSVNG 418
+++ +++ E+ Q + G
Sbjct: 187 KDEANHYLESDSQMIQDCIG 206
>UniRef50_O17039 Cluster: Putative uncharacterized protein T15B7.15;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein T15B7.15 - Caenorhabditis elegans
Length = 375
Score = 35.5 bits (78), Expect = 1.3
Identities = 30/119 (25%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Frame = +2
Query: 26 ESRRIPVQDNQIIDH---NLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQ 196
ES+ + +NQ+I+H LT++ Q+M R++Q + ++ + L Q +G++ ER ++
Sbjct: 185 ESKGHTLMNNQVIEHLELELTRK-KQDMLRMEQMLEEKQSE-----LTQEIGKTQEREEE 238
Query: 197 NIVHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLENEHIIPMQFHIKSEQEDDS 373
N+ R S++++ GQT ++ L + EN+ ++ +I+ E E +S
Sbjct: 239 NLKLR----------SLLEKSGQTTEKALKDSKRRLEESENKRKTTLEKYIQIENELNS 287
>UniRef50_Q1NDN7 Cluster: Putative uncharacterized protein; n=1;
Sphingomonas sp. SKA58|Rep: Putative uncharacterized
protein - Sphingomonas sp. SKA58
Length = 890
Score = 35.1 bits (77), Expect = 1.7
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +2
Query: 59 IIDHNLT---QRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLD 229
+ID L+ QR Q + +D+S+ +R L A + G I+ + + L +++D
Sbjct: 346 VIDERLSAVAQRTRQTLSTIDESLTRRADSLTALVAAAQTG--IDASSEQALAALARDMD 403
Query: 230 RIDQSVVQRLGQTVDQ 277
I+Q + RLG +DQ
Sbjct: 404 HIEQDLRGRLGAALDQ 419
>UniRef50_Q4UFJ9 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 503
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 92 QNMER-LDQSIAQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLDRIDQSVVQRLGQT 268
+ ME+ +DQ I + + + IDL + Q LGQ + ++ + I + GQ +D+ Q + Q G
Sbjct: 313 EQMEQDIDQKILEDM-EEIDLQIQQELGQGMGQMGEGI-DQFGQGIDQFGQGIEQS-GDG 369
Query: 269 VDQ 277
+DQ
Sbjct: 370 IDQ 372
>UniRef50_A0CPM7 Cluster: Chromosome undetermined scaffold_23, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_23, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2778
Score = 35.1 bits (77), Expect = 1.7
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +2
Query: 5 DQELMQAESRRIPVQDNQIIDHNLTQRW--TQNMERLDQSIAQRLGQTIDLNLAQRLGQS 178
DQ + + ++ + QII N RW Q + + + + Q +L + +
Sbjct: 737 DQAVFLVKFDQLQQKQEQIIKLNQQIRWPFNQYLSQYFKMLTQLDTIFQELKTFKTYDST 796
Query: 179 IERLDQNIVHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLENE 322
+ QN L NL +I QS +QR+ T++Q G D Q +L+N+
Sbjct: 797 ADPNTQNRYDSLRLNLKQICQSQIQRIKSTLEQYNQGVDQLQNKLDNQ 844
>UniRef50_UPI00004D80B1 Cluster: Heterogeneous nuclear
ribonucleoprotein M (hnRNP M).; n=2; Xenopus
tropicalis|Rep: Heterogeneous nuclear ribonucleoprotein
M (hnRNP M). - Xenopus tropicalis
Length = 657
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +2
Query: 98 MERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLDRIDQSVVQRLGQTVDQ 277
++R+ SI R+G TID R+G S++R+ + R+G +DR+ S + R+G +D+
Sbjct: 440 VDRMGSSI-DRVGSTID-----RMGSSLDRIGSGM-DRVGVGIDRLGSSSMDRMGSGLDR 492
>UniRef50_O06023 Cluster: Lob1; n=3; Histophilus somni|Rep: Lob1 -
Haemophilus somnus (Histophilus somni)
Length = 287
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +2
Query: 167 LGQSIER-LDQNIVHRLGQNLDR-IDQSVVQRLGQTVDQRLVGQDAGQQRLENEHIIPMQ 340
+ QSI + ++Q+I + Q++++ I+QS+ Q + Q+++Q ++ ++ E +H I Q
Sbjct: 1 MNQSINQSINQSINQSINQSINQSINQSINQSINQSINQSVIFVINLEKATERKHFISHQ 60
Query: 341 FHIKSEQEDD 370
F EQ D
Sbjct: 61 FTALQEQHPD 70
>UniRef50_A7DJD0 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Methylobacterium extorquens PA1
Length = 2251
Score = 34.7 bits (76), Expect = 2.2
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Frame = +2
Query: 74 LTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLD---QNIVHRLGQNLDRIDQS 244
LT + +E Q IA R G+++ LA R + ERL+ Q++ RL + +R+D
Sbjct: 674 LTDALDRRIEGSAQDIADR-GRSVGDVLAARAAEIAERLERTTQDLARRLDEGAERLDTG 732
Query: 245 VVQR---LGQTVDQRL--VGQDAGQQRLENEHII 331
VV R L T+++R + + G Q LE +I
Sbjct: 733 VVARLDALSGTLEERTRHLDESFGIQALEAVRLI 766
>UniRef50_A3XZ18 Cluster: Putative membrane protein; n=1; Vibrio sp.
MED222|Rep: Putative membrane protein - Vibrio sp.
MED222
Length = 519
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 92 QNMERLDQSI---AQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLDRIDQSVVQRL 259
QN + L Q + + L Q +A+ L ++I+ ++ +V + G N R+D SVV+ L
Sbjct: 159 QNFDLLSQELRDFSSSLSQQTSQQIAESLNEAIKDFNKGLVGQFGSNFQRLDDSVVKLL 217
>UniRef50_Q4V3E9 Cluster: IP10431p; n=4; Sophophora|Rep: IP10431p -
Drosophila melanogaster (Fruit fly)
Length = 475
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 264 CPSLCTTLWSILSKFCPNLCTMFWSNLSILCPKRWAKFKSIVW 136
CP++C +WSI F P+L ++ L I C W + I W
Sbjct: 279 CPAVCILVWSIAKAFAPHLENEHFNGLEIDC--AWMRESHIDW 319
>UniRef50_A7T9V9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 134
Score = 34.3 bits (75), Expect = 2.9
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Frame = -3
Query: 320 HSPTFV-----DQHPDPPVFDLRSAPA---SVQHSGQSYPNFVPIYVLCFGLIS--QYFA 171
H PTFV HP P ++ + +AP + +H G S+P+ P + LC L S FA
Sbjct: 24 HPPTFVYVGSSHPHPTPQLWFMWAAPIPTPTFRHVGSSHPHPTPSFGLCAQLPSPPPPFA 83
Query: 170 LSVG--PNSNQLFGLIAELYSGP 108
+ P FGL A+L S P
Sbjct: 84 MWAAPIPTPPPSFGLCAQLPSPP 106
>UniRef50_A0EAD6 Cluster: Chromosome undetermined scaffold_86, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_86,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 444
Score = 34.3 bits (75), Expect = 2.9
Identities = 23/88 (26%), Positives = 47/88 (53%)
Frame = +2
Query: 56 QIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLDRI 235
QI D+ L Q T N E+ +++I ++ I L+ +L + + + NI+ +L + R+
Sbjct: 357 QINDNALNQSTTSNQEQYEKTIDKK--NQIIKELSNQLLELEKNANVNIIDQLKSQIVRL 414
Query: 236 DQSVVQRLGQTVDQRLVGQDAGQQRLEN 319
+Q + ++ Q + Q + +D Q L+N
Sbjct: 415 EQQMQEKEDQWLAQERIYKDKIIQLLQN 442
>UniRef50_Q2TAA8 Cluster: Translin-associated factor X-interacting
protein 1; n=24; Mammalia|Rep: Translin-associated
factor X-interacting protein 1 - Homo sapiens (Human)
Length = 658
Score = 34.3 bits (75), Expect = 2.9
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +2
Query: 101 ERLDQSIAQRLG----QTIDLNLAQRLG-QSIERLDQ---NIVHRLGQNLDRIDQSVVQR 256
+R D S+AQ G + L LA ++ Q + R N+ G + R D + ++
Sbjct: 207 QREDMSLAQSPGIWGEDPVKLTLALKMTRQDLTRTQMELNNMKANFGDVVPRRDFEMQEK 266
Query: 257 LGQTVDQRLVGQDAGQQRLENEHIIPMQFHIKSEQEDDSYFYE 385
+ + ++L A + + EH I MQ H+ + +E D +F E
Sbjct: 267 TNKDLQEQLDTLRASYEEVRKEHEILMQLHMSTLKERDQFFSE 309
>UniRef50_P52272 Cluster: Heterogeneous nuclear ribonucleoprotein M;
n=69; Amniota|Rep: Heterogeneous nuclear
ribonucleoprotein M - Homo sapiens (Human)
Length = 730
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/73 (26%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +2
Query: 98 MERLDQSIAQRLGQTID-LNLAQRLGQSIERLDQNIVHRLGQNLDRIDQSVVQRLGQTVD 274
M+R+ I +R+G +D + +R+G IER+ + + +++R+ Q+ ++R+G V+
Sbjct: 427 MDRVGSEI-ERMGLVMDRMGSVERMGSGIERMGPLGLDHMASSIERMGQT-MERIGSGVE 484
Query: 275 QRLVGQDAGQQRL 313
+ G G +R+
Sbjct: 485 RMGAGMGFGLERM 497
>UniRef50_UPI0000382CAE Cluster: COG0840: Methyl-accepting
chemotaxis protein; n=1; Magnetospirillum
magnetotacticum MS-1|Rep: COG0840: Methyl-accepting
chemotaxis protein - Magnetospirillum magnetotacticum
MS-1
Length = 256
Score = 33.9 bits (74), Expect = 3.9
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 65 DHNLTQRWTQNMERLDQSIAQR---LGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLDRI 235
+ LT+ + E Q IA R +G+ + A+ + + +ER Q++ HRL +R+
Sbjct: 163 NRTLTEGLDRRAEGTVQDIAARSRAVGEALAARAAE-ISERLERTTQDLAHRLEAGAERL 221
Query: 236 DQSVVQRL 259
D VV RL
Sbjct: 222 DTGVVARL 229
>UniRef50_A4G348 Cluster: Putative uncharacterized protein; n=1;
Herminiimonas arsenicoxydans|Rep: Putative
uncharacterized protein - Herminiimonas arsenicoxydans
Length = 155
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 17 MQAESRRIPVQDNQIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQ 196
++ ES P++ I L + WT+ +++ + + ++ ID L QR+ +S+ Q
Sbjct: 63 VEVESTLTPIEHAPITGW-LDEEWTRMEQKISERVLTQILDRIDTVLEQRIRESLAGSVQ 121
Query: 197 NIVHRLGQNL-DRIDQSVVQRLGQTVDQ 277
V+ L Q L + +++ + + Q +D+
Sbjct: 122 LAVNELRQGLHETLEEVISDAVAQEIDK 149
>UniRef50_A0TME6 Cluster: 63 kDa protein; n=4; Burkholderia|Rep: 63
kDa protein - Burkholderia ambifaria MC40-6
Length = 964
Score = 33.9 bits (74), Expect = 3.9
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 44 VQDNQIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQ 220
V N+++ H+L + +ERL Q AQRLG+ + R+GQ + RL Q +H G+
Sbjct: 102 VVGNRVVRHDLHPTEERGLERLVQLRAQRLGERV------RIGQLLGRLVQARLHHSGR 154
>UniRef50_Q23RX5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1459
Score = 33.9 bits (74), Expect = 3.9
Identities = 30/132 (22%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Frame = +2
Query: 8 QELMQ-AESRRIPVQDNQIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQR-LGQSI 181
Q MQ E+ + ++ +I + + N ++ Q Q +T +++ L + +
Sbjct: 1085 QNFMQDIENTNLQTKNQKIFQNKAINSYESNESQIKQ---QEFLKTAHFESSEKFLNERL 1141
Query: 182 ERLD---QNIVHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLENEHIIPMQFHIK 352
ER +NI +++ Q L ++S Q + ++Q VG+++ QQ E H+ ++ I+
Sbjct: 1142 EREQLSKKNIKNQVPQQLPVEEESEYQDNDEELEQEEVGEESKQQNEEQNHV--LEEPIE 1199
Query: 353 SEQEDDSYFYEN 388
S ED ++N
Sbjct: 1200 SLMEDYPMLFQN 1211
>UniRef50_Q9HMF6 Cluster: Putative uncharacterized protein; n=1;
Halobacterium salinarum|Rep: Putative uncharacterized
protein - Halobacterium salinarium (Halobacterium
halobium)
Length = 705
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 188 LDQNIVHRLGQNLD-RIDQSVVQRLGQTVDQRLVGQDAGQQRLENEHIIPMQFHIKSEQE 364
+ QNI + Q R ++VQR G+ D+ +V D G Q +++ IP+ H+ +
Sbjct: 563 IGQNIARFVNQGFSPRSALAIVQRYGRADDKYMVLGDGGYQVAQSKSGIPVVAHLTTASS 622
Query: 365 DDSYFY 382
D S Y
Sbjct: 623 DSSQRY 628
>UniRef50_Q8I436 Cluster: Putative uncharacterized protein PFE0325w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE0325w - Plasmodium falciparum
(isolate 3D7)
Length = 3008
Score = 33.5 bits (73), Expect = 5.1
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 50 DNQIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLD 229
DN+ I HN Q + N+ D I+ + DL LG+ + L+ +I + QNL
Sbjct: 1204 DNENIHHNYHQPYNCNIYSDDYEISNNINNNNDL-----LGKYSKHLNNHIRNEENQNLL 1258
Query: 230 RIDQSVVQRLGQTV 271
+D+ + R G+ V
Sbjct: 1259 TLDEKHMNRSGENV 1272
>UniRef50_A0BJE7 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_11, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2123
Score = 33.5 bits (73), Expect = 5.1
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = +2
Query: 29 SRRIPVQDNQIIDHNLTQRWTQNMERLDQSIAQRLGQTID-LNLAQRLGQSIERLDQNIV 205
S I +Q NQ+I Q W +N I+ + Q I+ LN + ++ + Q +
Sbjct: 993 SELISLQQNQLISKFYYQLWNENKLTFKSQISTLIKQKIEQLNFDLNF-KHLQEIQQELE 1051
Query: 206 HRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLENEHIIPMQFHIKSEQEDDSYF 379
+L I++ + ++L Q +++ + Q+ + + II +Q I + Q + ++F
Sbjct: 1052 LKLSIECKIINKKIEEKLNQFKEEKNI-----QKNIYQKFIIKLQNEIHNLQTECNFF 1104
>UniRef50_Q7RJJ2 Cluster: Putative uncharacterized protein PY03268;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY03268 - Plasmodium yoelii yoelii
Length = 730
Score = 33.1 bits (72), Expect = 6.7
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 95 NMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLD-RIDQ 241
N E + I +R+G+ I + +R+G ER+ + I R+G+ +D RID+
Sbjct: 167 NNEGIGDRIGERIGERIGERIGERIG---ERIGERIGERIGERIDERIDE 213
>UniRef50_Q4UHB4 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 1207
Score = 33.1 bits (72), Expect = 6.7
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Frame = +2
Query: 2 LDQELMQAESRRIPVQD-NQIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQS 178
+ +E + E RI + ++ + L + ERLD R Q + LA+ +
Sbjct: 698 IHEEQERLEKERIEQERIRKLEEQRLEKERLAEKERLDIEEKIRFAQEVQKRLAREETER 757
Query: 179 I--ERLDQNIVHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLENEHI---IPM-- 337
+ ERL+Q + + +R+ + +RL + +RL G + G +R + I +P
Sbjct: 758 LKKERLEQERLEKERLEKERLRKQEEERLEK---ERLSGINVGNKRSGDYDIPAFVPSIS 814
Query: 338 --QFHIKSEQEDDSYFYENP 391
+F + E+EDD Y E P
Sbjct: 815 ADEFSVDGEEEDDDYEDELP 834
>UniRef50_A2E745 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 470
Score = 33.1 bits (72), Expect = 6.7
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +2
Query: 62 IDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQ--NIVHRLGQNLDRI 235
I N ++ +N+ IAQR G L+QR+ ++R D N+VHRL + R
Sbjct: 357 ITSNASEILRENINSNLSEIAQRCG-----TLSQRINNIVKRTDNATNVVHRLESSNSRC 411
Query: 236 DQSVVQRLGQTVDQRLVGQDAGQQR 310
D+S +++ T++Q L QQ+
Sbjct: 412 DES-LEKAAITLNQVLEDHRKVQQQ 435
>UniRef50_A0DJC1 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_53,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 397
Score = 33.1 bits (72), Expect = 6.7
Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +2
Query: 2 LDQELMQAESRRIPVQD---NQIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLG 172
++ L +AE R++ +Q+ N + + Q + N + D L L L +
Sbjct: 80 VNSNLTEAEKRQLLLQEYYRNDKARNAIRQLYNTNNQYEDDQTVPELYTETQLILPKIHA 139
Query: 173 QSIERLDQNIVHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLENEHIIPMQFHIK 352
Q+ + D++++ L Q++ + + +RL ++ Q+ LEN+ I+P+ +K
Sbjct: 140 QTTQVFDESLLRDL-QSMKNREDEITKRLQANEITQIKNPSDYQRMLENQTILPILQSMK 198
Query: 353 SE 358
+E
Sbjct: 199 NE 200
>UniRef50_Q9K967 Cluster: Exodeoxyribonuclease 7 large subunit;
n=19; Bacillaceae|Rep: Exodeoxyribonuclease 7 large
subunit - Bacillus halodurans
Length = 458
Score = 33.1 bits (72), Expect = 6.7
Identities = 30/119 (25%), Positives = 58/119 (48%)
Frame = +2
Query: 68 HNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLDRIDQSV 247
H L +R ++++RL +S A R + L Q +ERL ++ + DR+ Q +
Sbjct: 286 HELLKRQKEHLQRLQKSYAFRYPAQLVKQKELELDQQLERLTKHQRRMVSDAKDRLSQ-L 344
Query: 248 VQRLGQTVDQRLVGQDAGQQRLENEHIIPMQFHIKSEQEDDSYFYENPGQSLDSVNGLS 424
RL + + + Q A Q R++ E ++ +F E+++ + Q++ S+N LS
Sbjct: 345 EYRLKRIHPEGRLRQ-AEQARVKLEVLLKKEFQQMMERKEQQF-----QQAISSLNLLS 397
>UniRef50_UPI00006CD140 Cluster: Viral A-type inclusion protein repeat
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Viral A-type inclusion protein repeat
containing protein - Tetrahymena thermophila SB210
Length = 2937
Score = 32.7 bits (71), Expect = 8.9
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 44 VQDNQIIDHNLTQRWTQNMERLDQSIAQRLGQTIDLNLAQRLGQSIERLDQNIVHRLGQN 223
VQ+ Q + + +TQ ++L +S + Q +LNL +++ ++LDQ + +
Sbjct: 1473 VQELQKVMDQQQEEFTQIQQQLQESSQNQ--QKENLNLKEQMEHLKQQLDQKNAEIVSKQ 1530
Query: 224 LDRID-QSVVQRLGQTVDQRLVGQDAGQQRLE---NEHIIPMQFHIKSEQEDDSYFYENP 391
+ ++ + ++Q++ + Q+ D Q+ E N+H+ +Q I +QE+ S +N
Sbjct: 1531 EELLNLEDMLQKIENDLKQQKHEFDLQIQKQEDSNNQHVDQLQKIIDEKQEEISLLQQNQ 1590
Query: 392 GQS 400
S
Sbjct: 1591 QDS 1593
>UniRef50_Q4KCD3 Cluster: Nonribosomal peptide synthase; n=1;
Pseudomonas fluorescens Pf-5|Rep: Nonribosomal peptide
synthase - Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477)
Length = 2541
Score = 32.7 bits (71), Expect = 8.9
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +2
Query: 128 RLGQTIDLNLAQRLGQSIERLDQNIVHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQ 307
RL QT++++L LGQ+ ER + ++HR +L +Q+L QR G Q
Sbjct: 2365 RLLQTVNMSLQMTLGQTPERFAEVLIHRDEIDLALSPADYLQQLTDLARQR--GLKTSDQ 2422
Query: 308 RLE 316
RL+
Sbjct: 2423 RLQ 2425
>UniRef50_A0CUN1 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_28, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 853
Score = 32.7 bits (71), Expect = 8.9
Identities = 24/125 (19%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Frame = +2
Query: 8 QELMQAESRRIPVQDNQIIDHNLTQRWTQNMER-LDQSIAQRLGQTIDLNL-AQRLGQSI 181
QE+ Q + ++ ++ Q+I Q+ Q E+ +Q ++ + Q+++ ++ + + I
Sbjct: 696 QEIEQQQQQQQEIEQQQVIQQQEQQQQQQYQEQEQEQILSNQEQQSLNTSVPEENQNKEI 755
Query: 182 ERLDQNI--VHRLGQNLDRIDQSVVQRLGQTVDQRLVGQDAGQQRLENEHIIPMQFHIKS 355
L++ + + QN ++ + +++ QT+D + Q E I M+ I
Sbjct: 756 MILEEQFEKSNHIDQNNTNVEINQEEQITQTIDNNEIDIKQHTQEETQEAQIQMESEINE 815
Query: 356 EQEDD 370
+Q++D
Sbjct: 816 KQQED 820
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,419,663
Number of Sequences: 1657284
Number of extensions: 14497494
Number of successful extensions: 39142
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39048
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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