Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0870
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 317 2e-86
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 317 2e-86
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 317 2e-86
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 317 2e-86
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 317 2e-86
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 317 2e-86
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 317 2e-86
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 315 9e-86
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 308 1e-83
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 308 1e-83
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 308 1e-83
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 308 1e-83
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 308 1e-83
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 308 1e-83
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 304 1e-82
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 301 9e-82
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 295 1e-79
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 89 1e-17
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.4
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.2
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 4.2
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 4.2
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 7.3
X55415-2|CAA39074.1| 385|Homo sapiens protein ( Human mRNA for ... 29 9.7
X55415-1|CAA39073.1| 398|Homo sapiens protein ( Human mRNA for ... 29 9.7
X14085-1|CAA32247.1| 400|Homo sapiens beta-1,4-galactosyltransf... 29 9.7
X13223-1|CAA31611.1| 398|Homo sapiens lactose synthase protein. 29 9.7
U10474-1|AAA68220.1| 340|Homo sapiens beta-1,4-galactosyltransf... 29 9.7
U10473-1|AAA68219.1| 308|Homo sapiens beta-1,4-galactosyltransf... 29 9.7
M70432-1|AAB00776.1| 400|Homo sapiens beta-1,4-galactosyltransf... 29 9.7
M22921-2|AAA35937.1| 385|Homo sapiens protein ( Human beta 1,4-... 29 9.7
M22921-1|AAA35936.1| 397|Homo sapiens protein ( Human beta 1,4-... 29 9.7
M13701-1|AAA35935.1| 261|Homo sapiens protein ( Human galactosy... 29 9.7
D29805-1|BAA06188.1| 398|Homo sapiens beta-1,4-galactosyltransf... 29 9.7
BC045773-1|AAH45773.1| 225|Homo sapiens B4GALT1 protein protein. 29 9.7
AL161445-4|CAD13306.1| 398|Homo sapiens UDP-Gal:betaGlcNAc beta... 29 9.7
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 317 bits (778), Expect = 2e-86
Identities = 142/182 (78%), Positives = 161/182 (88%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 317 bits (778), Expect = 2e-86
Identities = 142/182 (78%), Positives = 161/182 (88%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 317 bits (778), Expect = 2e-86
Identities = 142/182 (78%), Positives = 161/182 (88%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 317 bits (778), Expect = 2e-86
Identities = 142/182 (78%), Positives = 161/182 (88%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 317 bits (778), Expect = 2e-86
Identities = 142/182 (78%), Positives = 161/182 (88%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 317 bits (778), Expect = 2e-86
Identities = 142/182 (78%), Positives = 161/182 (88%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 317 bits (778), Expect = 2e-86
Identities = 142/182 (78%), Positives = 161/182 (88%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 315 bits (773), Expect = 9e-86
Identities = 141/182 (77%), Positives = 160/182 (87%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G
Sbjct: 74 GKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGT 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 308 bits (756), Expect = 1e-83
Identities = 136/182 (74%), Positives = 159/182 (87%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 308 bits (756), Expect = 1e-83
Identities = 136/182 (74%), Positives = 159/182 (87%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+D
Sbjct: 13 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKID 72
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 73 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 132
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 133 KGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 192
Query: 548 TI 553
I
Sbjct: 193 VI 194
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 197 RERHPGSFDVVHVKD 211
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 308 bits (756), Expect = 1e-83
Identities = 136/182 (74%), Positives = 159/182 (87%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 308 bits (756), Expect = 1e-83
Identities = 136/182 (74%), Positives = 159/182 (87%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 308 bits (756), Expect = 1e-83
Identities = 136/182 (74%), Positives = 159/182 (87%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 308 bits (756), Expect = 1e-83
Identities = 136/182 (74%), Positives = 159/182 (87%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGV 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 134 KGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 198 RERHPGSFDVVHVKD 212
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 304 bits (747), Expect = 1e-82
Identities = 136/175 (77%), Positives = 155/175 (88%)
Frame = +2
Query: 29 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 208
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 209 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLV 388
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 389 THDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTI 553
THD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVI 175
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 178 RERHPGSFDVVHVKD 192
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 301 bits (740), Expect = 9e-82
Identities = 137/177 (77%), Positives = 156/177 (88%)
Frame = +2
Query: 23 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 202
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 203 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 382
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 383 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTI 553
LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVI 176
Score = 31.5 bits (68), Expect = 2.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 561 RERHAGXFDIVHIKD 605
RERH G FD+VH+KD
Sbjct: 179 RERHPGSFDVVHVKD 193
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 295 bits (723), Expect = 1e-79
Identities = 130/182 (71%), Positives = 154/182 (84%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVD 187
APKH MLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI Q +K+D
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKID 73
Query: 188 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 367
GKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++ G
Sbjct: 74 GKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGT 133
Query: 368 KNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 547
K +P+LVTHD RTIRYPDPLIKVND++Q+D+ T KI FIKF++GN+CM+ G NLGRVG
Sbjct: 134 KGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVG 193
Query: 548 TI 553
I
Sbjct: 194 VI 195
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 88.6 bits (210), Expect = 1e-17
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +2
Query: 8 APKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 136
APKH MLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 14 APKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 209 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 355
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.2
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 209 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 355
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 50 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 217
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 218 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 310
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 50 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 217
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 218 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 310
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 200 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 364
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>X55415-2|CAA39074.1| 385|Homo sapiens protein ( Human mRNA for
UDP_galactose:N-acetylglucosaminide-(beta 1->4)
galactosyltransferase. ).
Length = 385
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 149 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 182
>X55415-1|CAA39073.1| 398|Homo sapiens protein ( Human mRNA for
UDP_galactose:N-acetylglucosaminide-(beta 1->4)
galactosyltransferase. ).
Length = 398
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>X14085-1|CAA32247.1| 400|Homo sapiens
beta-1,4-galactosyltransferase (AA -77 to 323) protein.
Length = 400
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>X13223-1|CAA31611.1| 398|Homo sapiens lactose synthase protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>U10474-1|AAA68220.1| 340|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 340
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>U10473-1|AAA68219.1| 308|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 308
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 72 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 105
>M70432-1|AAB00776.1| 400|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 400
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>M22921-2|AAA35937.1| 385|Homo sapiens protein ( Human beta
1,4-galactosyl-transferase mRNA, complete cds. ).
Length = 385
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 149 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 182
>M22921-1|AAA35936.1| 397|Homo sapiens protein ( Human beta
1,4-galactosyl-transferase mRNA, complete cds. ).
Length = 397
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 161 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 194
>M13701-1|AAA35935.1| 261|Homo sapiens protein ( Human
galactosyltransferase mRNA, 3' end. ).
Length = 261
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 25 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 58
>D29805-1|BAA06188.1| 398|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>BC045773-1|AAH45773.1| 225|Homo sapiens B4GALT1 protein protein.
Length = 225
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
>AL161445-4|CAD13306.1| 398|Homo sapiens UDP-Gal:betaGlcNAc beta
1,4-galactosyltransferase, polypeptide 1 protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 32 KLGGVYAPRPSTGPHKLRECLPLVIFLRNR---LKYAL 136
K+GG YAPR PHK + ++I RNR LKY L
Sbjct: 162 KMGGRYAPRDCVSPHK----VAIIIPFRNRQEHLKYWL 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,224,914
Number of Sequences: 237096
Number of extensions: 2120762
Number of successful extensions: 14001
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 13818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14000
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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