Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0868
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...   180   9e-46
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...   179   1e-45
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...   179   2e-45
Z81527-14|CAB04278.2|  506|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z79753-8|CAB02089.2|  506|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score =  180 bits (437), Expect = 9e-46
 Identities = 89/144 (61%), Positives = 106/144 (73%)
 Frame = +3

Query: 87  KMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHG 266
           +M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD  K+ + G
Sbjct: 31  RMPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLG 90

Query: 267 KGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXX 446
           KGVL A+ NINE IAP L     +VT Q++ID+ M+ LDG+ENK  LGANAILGVSL   
Sbjct: 91  KGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVA 150

Query: 447 XXXXXXXNVPLYKHLADLAGNNDI 518
                   +PLYK++A+LAG   +
Sbjct: 151 KAGAVHKGLPLYKYIAELAGTGKV 174



 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +1

Query: 517 LVLPVPAFNVINGGSHAG 570
           +VLPVPAFNVINGGSHAG
Sbjct: 174 VVLPVPAFNVINGGSHAG 191


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score =  179 bits (436), Expect = 1e-45
 Identities = 90/143 (62%), Positives = 105/143 (73%)
 Frame = +3

Query: 90  MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 269
           M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD  K+ + GK
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60

Query: 270 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 449
           GVL A+ NINE IAP L     +VT Q++ID+ M+ LDG+ENK  LGANAILGVSL    
Sbjct: 61  GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120

Query: 450 XXXXXXNVPLYKHLADLAGNNDI 518
                  +PLYK++A+LAG   I
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKI 143


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score =  179 bits (435), Expect = 2e-45
 Identities = 89/143 (62%), Positives = 105/143 (73%)
 Frame = +3

Query: 90  MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 269
           M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD  K+ + GK
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60

Query: 270 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 449
           GVL A+ NINE IAP L     +VT Q++ID+ M+ LDG+ENK  LGANAILGVSL    
Sbjct: 61  GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120

Query: 450 XXXXXXNVPLYKHLADLAGNNDI 518
                  +PLYK++A+LAG   +
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKV 143



 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +1

Query: 517 LVLPVPAFNVINGGSHAG 570
           +VLPVPAFNVINGGSHAG
Sbjct: 143 VVLPVPAFNVINGGSHAG 160


>Z81527-14|CAB04278.2|  506|Caenorhabditis elegans Hypothetical
           protein F35E12.8 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -2

Query: 209 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 120
           GGT  +     A+  + IN+HC++  +++D
Sbjct: 35  GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64


>Z79753-8|CAB02089.2|  506|Caenorhabditis elegans Hypothetical
           protein F35E12.8 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -2

Query: 209 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 120
           GGT  +     A+  + IN+HC++  +++D
Sbjct: 35  GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,583,093
Number of Sequences: 27780
Number of extensions: 228190
Number of successful extensions: 639
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)