Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0862
(429 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 210 9e-54
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 186 2e-46
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 154 6e-37
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 153 1e-36
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 140 1e-32
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 138 5e-32
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 133 2e-30
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 122 2e-27
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 117 9e-26
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 101 5e-21
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 89 4e-17
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 87 1e-16
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 2e-12
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 72 4e-12
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 61 8e-09
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 2e-07
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 56 4e-07
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 56 4e-07
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 54 1e-06
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 51 9e-06
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 48 8e-05
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 46 4e-04
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.001
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 42 0.005
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 41 0.009
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 41 0.009
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 41 0.009
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 40 0.029
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 38 0.12
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 38 0.12
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.15
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 37 0.20
UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1; Metha... 36 0.47
UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5; Sulfol... 36 0.47
UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.1
UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3; Thermoto... 33 1.9
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 33 2.5
UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeu... 33 3.3
UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.2... 32 4.4
UniRef50_Q74MA1 Cluster: 30S ribosomal protein S17e; n=1; Nanoar... 32 4.4
UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-pro... 32 5.8
UniRef50_Q2J914 Cluster: Cyclopropane-fatty-acyl-phospholipid sy... 32 5.8
UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep: M... 32 5.8
UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2; ... 32 5.8
UniRef50_Q8TXZ1 Cluster: NMD protein affecting ribosome stabilit... 32 5.8
UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25 ... 31 7.7
UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Re... 31 7.7
UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula marismo... 31 7.7
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 210 bits (513), Expect = 9e-54
Identities = 101/118 (85%), Positives = 107/118 (90%)
Frame = +3
Query: 15 KPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQV 194
K KAAK+IIEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQV
Sbjct: 7 KTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQV 66
Query: 195 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 368
RGISIKLQEEERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 67 RGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 186 bits (452), Expect = 2e-46
Identities = 86/116 (74%), Positives = 102/116 (87%)
Frame = +3
Query: 15 KPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQV 194
K KAA++IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ V
Sbjct: 7 KTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPV 66
Query: 195 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 362
RGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 67 RGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 154 bits (374), Expect = 6e-37
Identities = 73/107 (68%), Positives = 85/107 (79%)
Frame = +3
Query: 42 IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 221
IIEKYYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQE
Sbjct: 71 IIEKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQE 130
Query: 222 EERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 362
EERERRDNYVPE SAL+ +IIEVDPDTK ML + F ++ Q TQP
Sbjct: 131 EERERRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 153 bits (371), Expect = 1e-36
Identities = 73/119 (61%), Positives = 94/119 (78%)
Frame = +3
Query: 15 KPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQV 194
K + KA ++IIEKY TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+R V
Sbjct: 8 KITKKATQVIIEKYCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPV 66
Query: 195 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 371
RGISIKLQEEERE RDNYVPE+S L+ + +EVDPDTK+ML++LDF +++ LQ+T+P +
Sbjct: 67 RGISIKLQEEERENRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 140 bits (338), Expect = 1e-32
Identities = 64/112 (57%), Positives = 87/112 (77%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGIS 206
KA ++ ++YYT L +F +NKR CEE II +K L NKI G+ HLM+R++ VRGIS
Sbjct: 65 KATQVFTDQYYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGIS 124
Query: 207 IKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 362
IKLQE+ERER+DNYVPE+SA + + IEVDPDTK+M K+L+F +++ LQ+TQP
Sbjct: 125 IKLQEKERERKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 138 bits (334), Expect = 5e-32
Identities = 65/122 (53%), Positives = 90/122 (73%)
Frame = +3
Query: 15 KPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQV 194
K K ++ +IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++ V
Sbjct: 7 KTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPV 66
Query: 195 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQG 374
RGIS+KLQEEERERR ++VPE SALE + I VD +T +ML L ++ G++ Q +
Sbjct: 67 RGISLKLQEEERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQEVSAP 126
Query: 375 GY 380
Y
Sbjct: 127 TY 128
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 133 bits (321), Expect = 2e-30
Identities = 61/106 (57%), Positives = 85/106 (80%)
Frame = +3
Query: 45 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 224
+ +Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQEE
Sbjct: 54 VPEYHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE 113
Query: 225 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 362
ERR +Y+PEVSAL+ +I EVDP TK+MLK+LD +++ LQ+TQP
Sbjct: 114 --ERRADYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 122 bits (295), Expect = 2e-27
Identities = 56/102 (54%), Positives = 78/102 (76%)
Frame = +3
Query: 12 LKPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQ 191
++ KAAK++IEKYY +LT DF NK+I E+ +P+K LRNKIAGFATHL++R++
Sbjct: 46 IRQQRKAAKVLIEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGS 105
Query: 192 VRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLK 317
V+GIS+K+QEEERERR +YVPE S+++ D + D D K ML+
Sbjct: 106 VKGISLKIQEEERERRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 117 bits (282), Expect = 9e-26
Identities = 57/108 (52%), Positives = 80/108 (74%)
Frame = +3
Query: 39 IIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 218
+I+EK+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V +
Sbjct: 64 VILEKHYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------R 117
Query: 219 EEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 362
ER +++ YVPEVSAL+ +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 118 GGER-KKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 101 bits (243), Expect = 5e-21
Identities = 49/107 (45%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Frame = +3
Query: 15 KPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQV 194
K +A++ ++EKYY++L DF NKR+ ++ I +K L+NKIAG+ TH+M+RL V
Sbjct: 7 KTVKRASRQVVEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPV 66
Query: 195 RGISIKLQEEERERRDNYVPEVSALEHDI---IEVDPDTKDMLKMLD 326
RGIS+KLQEEERERR ++ P S ++ I + VD T ML+ L+
Sbjct: 67 RGISLKLQEEERERRMDHAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 89.0 bits (211), Expect = 4e-17
Identities = 46/105 (43%), Positives = 65/105 (61%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGIS 206
K A +I EKYY L DF +K +C+EI I ++ L +KIAG+ THLM+ +R S + +S
Sbjct: 11 KVAWVITEKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-VS 69
Query: 207 IKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 341
R R NYVPE S L+ +I EVD TK+MLK+ F +++
Sbjct: 70 PSSCRRRRRDRSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 87.4 bits (207), Expect = 1e-16
Identities = 39/97 (40%), Positives = 64/97 (65%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGIS 206
+AA+ I EKY+ RL FD N + +++A++ +K L+N+IAG+ T L +++ +
Sbjct: 11 RAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVY 70
Query: 207 IKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLK 317
IK EEERER++N +P+ S L+ D +EVD T +M+K
Sbjct: 71 IKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 73.3 bits (172), Expect = 2e-12
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3
Query: 153 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 332
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 72.1 bits (169), Expect = 4e-12
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = +3
Query: 15 KPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQV 194
K ++AK I KY+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++ +
Sbjct: 7 KTIKRSAKYIFIKYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKK 66
Query: 195 RGI--SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 341
+ I +IK E + S E + VD +TK M+K L F N N
Sbjct: 67 KKIYTNIKFDINNIEINNKESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 61.3 bits (142), Expect = 8e-09
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 182
+ A +I+KY T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 11 RTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +3
Query: 255 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 362
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 55.6 bits (128), Expect = 4e-07
Identities = 29/78 (37%), Positives = 50/78 (64%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGIS 206
+ AK+++E+Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR + + R +S
Sbjct: 11 RTAKMLVEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQR-LS 69
Query: 207 IKLQEEERERRDNYVPEV 260
++ QE + Y+ +
Sbjct: 70 MR-QEITMTDEEEYIRRI 86
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 55.6 bits (128), Expect = 4e-07
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 200
+ A+ I+EKY LT DF+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 11 RPAREIVEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 54.4 bits (125), Expect = 1e-06
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 12 LKPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHS 188
+K KAA +I EK YT L+ D K +C+EI I P+K L KIAGF LM+++ R+
Sbjct: 23 IKTGKKAAWVITEKNYTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNY 81
Query: 189 QVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDP 296
+++ +S L ER +D V L+ +++ +P
Sbjct: 82 KLQELSSSL-AAERISKDIVCQNVGFLQINMLMSEP 116
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 51.2 bits (117), Expect = 9e-06
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 170
+ AK +IE + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 11 RIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 48.0 bits (109), Expect = 8e-05
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGIS 206
+ A+ ++E Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R + +
Sbjct: 11 RTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYL 70
Query: 207 IKLQEEERER 236
I+ Q E R
Sbjct: 71 IEQQHAEEFR 80
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 45.6 bits (103), Expect = 4e-04
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 170
+ A+ ++EKY T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 11 RTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +3
Query: 75 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 164
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 41.9 bits (94), Expect = 0.005
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 12 LKPSX--KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 170
+KP+ K +++E+Y DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 3 IKPAYVKKTGTLLMERYPDAFGADFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 41.1 bits (92), Expect = 0.009
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 42 IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT-HLMRRLRHSQVR---GISI 209
++E + ++ DF NK+I E++I+ +K L+N+IAG+ T ++ + +R + + +
Sbjct: 11 VLETHKSKFGEDFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREEKAKKAQAEAS 70
Query: 210 KLQEEERERRDNYVPEVSALEHDIIEVDPDTK 305
K E+E + V E E P+T+
Sbjct: 71 KSLEQEAQVEPEPVEATENTEAPAAEETPETE 102
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 41.1 bits (92), Expect = 0.009
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 182
+ A +IE Y T DF+TNK + + I +K +RN++AG+ T + R++
Sbjct: 11 RTAFSLIENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 41.1 bits (92), Expect = 0.009
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +3
Query: 33 AKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 176
A+ +++KY T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 13 ARELLKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 39.5 bits (88), Expect = 0.029
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +3
Query: 9 GLKPSX-KAAKI-IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT 161
G+KPS K+ I ++E++ +FD NK++ EI I +K +RN++AG+ T
Sbjct: 2 GIKPSYIKSMGIALLEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 37.5 bits (83), Expect = 0.12
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 42 IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 170
++ +Y DF NK E++A + TK +RN+IAG+ T M
Sbjct: 16 LLRQYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 37.5 bits (83), Expect = 0.12
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTL-DFDTNKRICEEIAIIPTKPLRNKIAGFATH 164
K I++E+Y + DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 10 KTGNILMERYQDAFSREDFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 37.1 bits (82), Expect = 0.15
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 195 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQG 374
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQT 171
Query: 375 GYG 383
+G
Sbjct: 172 LHG 174
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 36.7 bits (81), Expect = 0.20
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 164
K AK ++ K T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 11 KLAKQLL-KEVAECTDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1;
Methanosaeta thermophila PT|Rep: Ribosomal protein
S17E-like - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 86
Score = 35.5 bits (78), Expect = 0.47
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 12 LKPSX--KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 176
+KPS AK ++ Y T DF+ NK + K +RN+IAG+ T ++ +
Sbjct: 18 VKPSYIKNFAKKLLSTYEGEFTTDFEMNKEKVSAYTNVRNKAIRNRIAGYITRILEQ 74
>UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S17e -
Sulfolobus acidocaldarius
Length = 82
Score = 35.5 bits (78), Expect = 0.47
Identities = 16/71 (22%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 15 KPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS-Q 191
K + A+ + +K+ + + +D NK++ +E + +K ++N+IAG+ T ++ ++ +
Sbjct: 7 KDIKRVARELYDKFKDQASDKYDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVKISKNKVE 66
Query: 192 VRGISIKLQEE 224
+ S +L+E+
Sbjct: 67 AQEASEELEED 77
>UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 405
Score = 34.3 bits (75), Expect = 1.1
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 93 RICEEIA-IIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA- 266
RIC I ++ +P+ + G L +R++ + + +K + EE +++ E S
Sbjct: 104 RICPVIRELLDARPVTARTGGDIRQLEKRIQELEKKNAELKKENEENKKKLRAKSESSQS 163
Query: 267 --LEHDIIEVDPDTKDMLKMLDFNNINGLQ 350
LE + + PD KD+++ + N+ +Q
Sbjct: 164 KDLEEKLFLLLPDEKDIVEASESGNLKAVQ 193
>UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3;
Thermotogaceae|Rep: Flagellar M-ring protein -
Thermotoga maritima
Length = 532
Score = 33.5 bits (73), Expect = 1.9
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 144 IAGFATHLMRRLRHSQVRGISIKLQEEERERR-DNYVPEVSALEHDIIEVDPDTKDMLKM 320
+ GF T ++ L Q+R I + EER R+ + V E+ E EV P+ K++L++
Sbjct: 446 LLGFLTFMLIYLMIVQIRRIRARKLAEERRRKLEEEVKEILQEELKEEEVSPEEKELLEL 505
Query: 321 LD 326
L+
Sbjct: 506 LE 507
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 33.1 bits (72), Expect = 2.5
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -3
Query: 163 CVANPAILFLRGLVGMIAISSHILLFVSKSSVN 65
CV PAILFL L+ SS LF SKSSV+
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVH 50
>UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 644
Score = 32.7 bits (71), Expect = 3.3
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 123 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERR 239
TKP N+ GF + ++ +Q++ S K++EEERE+R
Sbjct: 206 TKPKVNRPQGFTIGQILKIEENQIQYKSKKIEEEEREQR 244
>UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S17E - Cenarchaeum
symbiosum
Length = 174
Score = 32.7 bits (71), Expect = 3.3
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 27 KAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 164
K + +++ + + L F+ NK+ E ++ I K L+N+IAG+ T+
Sbjct: 57 KHTEELLKNHKSEFGLSFEENKKTLERLSTIRYKILKNEIAGYITN 102
>UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.25;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4F7.25 - Arabidopsis thaliana (Mouse-ear cress)
Length = 790
Score = 32.3 bits (70), Expect = 4.4
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 159 THLMRRLRHSQVRGISIKLQEEERE-RRDNYVPEVSALEHDIIEVDPDTKDML 314
T L+ H + + I LQ+ +E RR YVP+ S + HD +E D +DML
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHD-VESDGHKEDML 719
>UniRef50_Q74MA1 Cluster: 30S ribosomal protein S17e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17e -
Nanoarchaeum equitans
Length = 72
Score = 32.3 bits (70), Expect = 4.4
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 12 LKPSXKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 173
+K + A + ++Y T DF+ NK++ + + +K RN+IAG+ L++
Sbjct: 6 IKVVKRTALELFKRYPDIWTKDFEKNKKLVQALLKKVSKKFRNQIAGYLVRLVK 59
>UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-prov
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Brms1l-prov protein -
Strongylocentrotus purpuratus
Length = 318
Score = 31.9 bits (69), Expect = 5.8
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 177 LRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 341
LR ++ I KLQ EE+ R+N+ E S L D+++ D D K D +NI+
Sbjct: 121 LRELRMENIRNKLQSEEKASRENHESEKSLL-RDLMKADLDEKIRRLEEDRHNID 174
>UniRef50_Q2J914 Cluster: Cyclopropane-fatty-acyl-phospholipid
synthase; n=7; Actinomycetales|Rep:
Cyclopropane-fatty-acyl-phospholipid synthase - Frankia
sp. (strain CcI3)
Length = 482
Score = 31.9 bits (69), Expect = 5.8
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 96 ICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEH 275
+C ++ + P + L + G+ + L+ RH VRG+ + + E+ + V E
Sbjct: 203 VCRKLGLRPGERLLDIGCGWGSMLIHAARHHGVRGVGVTISVEQATQARRLVAEADLA-- 260
Query: 276 DIIEV 290
D+IE+
Sbjct: 261 DVIEI 265
>UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep:
Mob/Pre - Bacillus coagulans
Length = 474
Score = 31.9 bits (69), Expect = 5.8
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +3
Query: 180 RHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML----KMLDF-NNIN 341
+H Q +G I+ +EE ER+ VPE + + +V +TK++ ++ +F NN+N
Sbjct: 164 KHLQEKGFEIQRGKEESERKHLSVPEYKEAKEEAKKVKEETKELASKASQLAEFHNNVN 222
>UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2;
Bacillus|Rep: Metal dependent phosphohydrolase -
Bacillus coagulans 36D1
Length = 216
Score = 31.9 bits (69), Expect = 5.8
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 189 QVRGISIKLQEEERERRDNYVPEVSALEHDIIEV 290
+VRG+++ + E+E E+ D ++ E SAL HDI +V
Sbjct: 32 RVRGLALYIAEKE-EKGDRFIIEASALLHDIPDV 64
>UniRef50_Q8TXZ1 Cluster: NMD protein affecting ribosome stability
and mRNA decay; n=1; Methanopyrus kandleri|Rep: NMD
protein affecting ribosome stability and mRNA decay -
Methanopyrus kandleri
Length = 354
Score = 31.9 bits (69), Expect = 5.8
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 189 QVRGISIKLQEEERERRDNYVPEVSA--LEHDIIEVDPDTKDMLKMLDF--NNINGLQLT 356
QVR + KL E ERE +N+V E +A LE D + D + + +DF ++N +
Sbjct: 152 QVRSLRGKLTEREREEVENFVTEAAASLLERDPMAYISDVEYPEEGIDFYIGSLNAARKL 211
Query: 357 QPATQGGYGG 386
YGG
Sbjct: 212 ARRLVDAYGG 221
>UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164).; n=1;
Takifugu rubripes|Rep: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164). - Takifugu
rubripes
Length = 661
Score = 31.5 bits (68), Expect = 7.7
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 90 KRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERER---RDNYVPEV 260
KR EE+ I + L L RR H R + Q++ERER D+ V E
Sbjct: 346 KREKEELEEIRQRLLDEGHPNPDAELRRREHHRGSRSHRDRRQDQERERPAHTDHEVEEG 405
Query: 261 SALEHDIIEVDPDTKDMLK 317
E+D E +P+TK LK
Sbjct: 406 EEEEYDNDEDNPETKPCLK 424
>UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 544
Score = 31.5 bits (68), Expect = 7.7
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +3
Query: 147 AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 326
A +++HL+RR+ + K Q EE ++ + + + LEHD+I + +T D+LK L+
Sbjct: 41 AAWSSHLIRRMFAPP----NPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96
>UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula
marismortui|Rep: Sensor protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 450
Score = 31.5 bits (68), Expect = 7.7
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 236 PLTLLFLKFDRDSSHLRVSETP--H*MCGKSSNFIPKRLGRNDSD 108
P T+L F+R+S HL V +T + + SS P+ LGR D D
Sbjct: 127 PETILATMFERNSEHLYVKDTDRHYLLLNDSSYAPPELLGRRDED 171
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,594,325
Number of Sequences: 1657284
Number of extensions: 6690104
Number of successful extensions: 20304
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 19850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20292
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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