Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0861
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.8  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 374 QAISQAFTREYGRDLIEDLKSELGGHFEDVIVAL 475
           Q   Q F  E  R L+EDL++E    + DV+V +
Sbjct: 140 QEFIQIFNEETKR-LVEDLEAECHKPYIDVVVPI 172


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = -1

Query: 545 LHPCPY--PPCNGAAPGTGTPQGESSE 471
           L P PY  P  + AAP T + + +SSE
Sbjct: 108 LRPHPYLSPLFHSAAPRTASRETKSSE 134


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 499 QVLLRGSHQSHDYIFEVTTQ 440
           ++LLR   + H + F  TT+
Sbjct: 198 EILLRNGEKHHSFPFRKTTE 217


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 277 YGIEVRHSYYSWSSLIGH 224
           Y I VRH+YY     I H
Sbjct: 60  YSIYVRHTYYRRLYTITH 77


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 277 YGIEVRHSYYSWSSLIGH 224
           Y I VRH+YY     I H
Sbjct: 60  YSIYVRHTYYRRLYTITH 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,755
Number of Sequences: 336
Number of extensions: 3567
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)