Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0857
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 56 3e-08
SB_16448| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_47478| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28) 52 4e-07
SB_28488| Best HMM Match : PAX (HMM E-Value=0) 52 6e-07
SB_34509| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_47477| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_16319| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30) 47 1e-05
SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_10425| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_54937| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_54939| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_51509| Best HMM Match : Homeobox (HMM E-Value=2.3e-09) 42 5e-04
SB_5296| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29) 37 0.018
SB_48493| Best HMM Match : Homeobox (HMM E-Value=6.3e-08) 36 0.024
SB_6712| Best HMM Match : Homeobox (HMM E-Value=8e-06) 33 0.29
SB_11048| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 31 0.68
SB_49340| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 31 0.68
SB_18861| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 31 0.68
SB_17558| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 31 0.68
SB_174| Best HMM Match : Homeobox (HMM E-Value=1.9e-19) 31 0.68
SB_31530| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_45417| Best HMM Match : Homeobox (HMM E-Value=5.1e-09) 30 2.1
SB_17425| Best HMM Match : Homeobox (HMM E-Value=7.2e-07) 30 2.1
SB_11047| Best HMM Match : Homeobox (HMM E-Value=5.3e-17) 30 2.1
SB_6972| Best HMM Match : Homeobox (HMM E-Value=7.2e-07) 30 2.1
SB_15284| Best HMM Match : Homeobox (HMM E-Value=5.3e-17) 30 2.1
SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45) 29 3.6
SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29) 29 3.6
SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30) 28 8.4
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L E+E +FQKTHYPDV+ RE++ALR +L+EARVQV
Sbjct: 416 LEEMERVFQKTHYPDVYTREQLALRCALTEARVQV 450
>SB_16448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L+ELE F +THYPDVF+REE+A RI L+E+RVQV
Sbjct: 102 LNELERCFARTHYPDVFMREELAARIGLTESRVQV 136
>SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L +LE F+KT YPDVF REE+ALR+ LSEARVQV
Sbjct: 104 LHQLERAFEKTQYPDVFTREELALRLDLSEARVQV 138
>SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELE F+K+HYPDV+ REE+AL+ISL E RVQV
Sbjct: 97 LHELERAFEKSHYPDVYTREELALKISLPEVRVQV 131
>SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 355 ELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
ELE F+KTHYPD++ REE+A R+ LSEARVQV
Sbjct: 562 ELERAFRKTHYPDIYAREELAQRLGLSEARVQV 594
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQ 450
+ ELE F KT YPDV+ REE+A R++L+EARVQ
Sbjct: 33 VDELEKAFLKTQYPDVYTREELAQRLNLTEARVQ 66
>SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELE +F+K HYPD+ LREE+A +I++SEAR+QV
Sbjct: 80 LQELEKVFEKKHYPDIALREELAAKINISEARIQV 114
>SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELE F KTHYPDVF RE +A++I L+EARVQV
Sbjct: 298 LEELERAFAKTHYPDVFTREALAVKIDLTEARVQV 332
>SB_47478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE LF KT YPD+F+REEVA++I+L E+RVQV
Sbjct: 55 LEVLEELFAKTRYPDIFMREEVAIKINLPESRVQV 89
>SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28)
Length = 246
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE LF KT YPD+F+REEVA++I+L E+RVQV
Sbjct: 70 LEILEELFAKTRYPDIFMREEVAIKINLPESRVQV 104
>SB_28488| Best HMM Match : PAX (HMM E-Value=0)
Length = 551
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +1
Query: 355 ELESLFQKTHYPDVFLREEVALRISLSEARVQ 450
ELE F+KTHYPD++ REE+A R+ LSEARVQ
Sbjct: 520 ELERAFRKTHYPDIYAREELAQRLGLSEARVQ 551
>SB_34509| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE+ FQKTHYPDV LREE+A+++ L E RV+V
Sbjct: 86 LELLETTFQKTHYPDVLLREELAMKVDLKEERVEV 120
>SB_47477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQ 450
L LE LF KT YPD+F+REEVA++I+L E+RVQ
Sbjct: 451 LEILEELFAKTRYPDIFMREEVAIKINLPESRVQ 484
>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQ 450
+ +LE +F+KTHYPDVF RE +A +++LSEAR+Q
Sbjct: 340 IEKLEKVFEKTHYPDVFTREGLAQQVNLSEARIQ 373
>SB_16319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE F ++ YPDVF RE++A RI+L+EARVQV
Sbjct: 170 LDSLEEAFSRSQYPDVFTREQLAKRINLNEARVQV 204
>SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30)
Length = 285
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L +LE LF++THYPD RE +A ++ LSEARVQ+
Sbjct: 128 LRDLERLFEQTHYPDAMTREGLAKKLGLSEARVQI 162
>SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ ELE F K YPDVF REE+A ++ L+EAR+QV
Sbjct: 75 IEELERAFDKAPYPDVFAREELAAKLGLTEARIQV 109
>SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L+ LE +F KTHYPDV +RE++A +L EAR+QV
Sbjct: 79 LTALEKVFSKTHYPDVEVREQLATSTNLQEARIQV 113
>SB_10425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 293
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LES F KTHYPDV +RE++A I++ E+R+QV
Sbjct: 68 LQILESTFSKTHYPDVVMREQLAAYINIPESRIQV 102
>SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELE F+++HYPDV+ RE ++L+I L E R+Q+
Sbjct: 108 LEELEKAFKESHYPDVYARENLSLKIDLPEDRIQI 142
>SB_54937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQ 450
L LE F+K+HYPDV REE+A +I +SEARVQ
Sbjct: 121 LEMLEKEFEKSHYPDVATREELANKIDMSEARVQ 154
>SB_54939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE+ F THYPDV LRE++A ++L EAR+QV
Sbjct: 161 LQVLENTFCNTHYPDVMLREQLASYVNLPEARIQV 195
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE F +THYPDV LRE++A+ +L E+R+QV
Sbjct: 1120 LDTLERAFSRTHYPDVLLREQLAVYTNLPESRIQV 1154
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L +LE F + YPD+ +REE+AL +L+EARV+V
Sbjct: 753 LQQLEGTFGRNRYPDMQMREEIALYTNLTEARVRV 787
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELE ++ YPDVF RE +AL++ L E+R+QV
Sbjct: 332 LEELEKIYHHNQYPDVFTREALALKLDLLESRIQV 366
>SB_51509| Best HMM Match : Homeobox (HMM E-Value=2.3e-09)
Length = 53
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQ 450
L ELE ++ YPDVF RE +AL++ L E+R+Q
Sbjct: 20 LEELEKIYHHNQYPDVFTREALALKLDLLESRIQ 53
>SB_5296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L +LE +QK YPDV RE +A R+ ++E+RVQV
Sbjct: 232 LEQLEDAYQKAKYPDVQARETLAQRLGVAESRVQV 266
>SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29)
Length = 269
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 355 ELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
++E +F HYPDV R E++ R LSE++VQ+
Sbjct: 88 QMERVFLLNHYPDVAARSELSRRTGLSESQVQI 120
>SB_48493| Best HMM Match : Homeobox (HMM E-Value=6.3e-08)
Length = 121
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LES F +THYP ++ R+++A L E R+QV
Sbjct: 35 LCALESAFAQTHYPPIYERDQLAGYTGLPEERIQV 69
>SB_6712| Best HMM Match : Homeobox (HMM E-Value=8e-06)
Length = 169
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEAR 444
L+ LE FQK H+PD LR+ +A R L E R
Sbjct: 118 LAILEEGFQKQHFPDNKLRQAIATRAGLPEDR 149
>SB_11048| Best HMM Match : Homeobox (HMM E-Value=2.9e-21)
Length = 193
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 358 LESLFQKTHYPDVFLREEVALRISLSEARVQV 453
LE FQ +P + +RE++A + + E+R+QV
Sbjct: 44 LEGAFQYERFPGIQIREKLARELDIDESRIQV 75
>SB_49340| Best HMM Match : Homeobox (HMM E-Value=2.9e-21)
Length = 193
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 358 LESLFQKTHYPDVFLREEVALRISLSEARVQV 453
LE FQ +P + +RE++A + + E+R+QV
Sbjct: 44 LEGAFQYERFPGIQIREKLARELDIDESRIQV 75
>SB_18861| Best HMM Match : Homeobox (HMM E-Value=2.9e-21)
Length = 193
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 358 LESLFQKTHYPDVFLREEVALRISLSEARVQV 453
LE FQ +P + +RE++A + + E+R+QV
Sbjct: 44 LEGAFQYERFPGIQIREKLARELDIDESRIQV 75
>SB_17558| Best HMM Match : Homeobox (HMM E-Value=2.9e-21)
Length = 193
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 358 LESLFQKTHYPDVFLREEVALRISLSEARVQV 453
LE FQ +P + +RE++A + + E+R+QV
Sbjct: 44 LEGAFQYERFPGIQIREKLARELDIDESRIQV 75
>SB_174| Best HMM Match : Homeobox (HMM E-Value=1.9e-19)
Length = 149
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 358 LESLFQKTHYPDVFLREEVALRISLSEARVQV 453
LE FQ +P + +RE++A + + E+R+QV
Sbjct: 17 LEEAFQYERFPGIQIREKLARELDIDESRIQV 48
>SB_31530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ ELES F YP ++ +A+R+ L ++RVQV
Sbjct: 427 IEELESAFSINPYPTSLHKKALAVRLGLRDSRVQV 461
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 355 ELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+LES F YP + +A+R+ L ++RVQV
Sbjct: 468 KLESAFAINPYPTCLYEKALAVRLGLRDSRVQV 500
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 355 ELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+LES F YP + +A+R+ L ++RVQV
Sbjct: 507 KLESAFAINPYPTCLYEKALAVRLGLRDSRVQV 539
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 355 ELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+LES F YP + +A+R+ L ++RVQV
Sbjct: 546 KLESAFAINPYPTCLYEKALAVRLGLRDSRVQV 578
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 632 RRVPRRWANPVFPGEESGGLAWPGIGSGG 546
R +P RW + F G SGG ++ G GSGG
Sbjct: 194 RELPDRWQHDKFDGRGSGGRSFSG-GSGG 221
>SB_45417| Best HMM Match : Homeobox (HMM E-Value=5.1e-09)
Length = 216
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 361 ESLFQKTHYPDVFLREEVALRISLSEARVQV 453
E FQ +P + +RE++A + + E+R+QV
Sbjct: 68 EGAFQYERFPGIQIREKLARELDIDESRIQV 98
>SB_17425| Best HMM Match : Homeobox (HMM E-Value=7.2e-07)
Length = 387
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 358 LESLFQKTHYPDVFLREEVALRISLSEARVQ 450
LE FQ +P + +RE++A + + E+R+Q
Sbjct: 44 LEGAFQYERFPGIQIREKLARELDIDESRIQ 74
>SB_11047| Best HMM Match : Homeobox (HMM E-Value=5.3e-17)
Length = 193
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 358 LESLFQKTHYPDVFLREEVALRISLSEARVQV 453
LE FQ +P + +RE++ + + E+R+QV
Sbjct: 44 LEGAFQYERFPGIQIREKLVRELDIDESRIQV 75
>SB_6972| Best HMM Match : Homeobox (HMM E-Value=7.2e-07)
Length = 74
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 358 LESLFQKTHYPDVFLREEVALRISLSEARVQ 450
LE FQ +P + +RE++A + + E+R+Q
Sbjct: 44 LEGAFQYERFPGIQIREKLARELDIDESRIQ 74
>SB_15284| Best HMM Match : Homeobox (HMM E-Value=5.3e-17)
Length = 159
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 358 LESLFQKTHYPDVFLREEVALRISLSEARVQV 453
LE FQ +P + +RE++ + + E+R+QV
Sbjct: 44 LEGAFQYERFPGIQIREKLVRELDIDESRIQV 75
>SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45)
Length = 527
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ ELE+ FQ+ +Y R E+A+ + L+E +V+V
Sbjct: 104 IQELENEFQRNNYLTRLRRYEIAVSLDLTERQVKV 138
>SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29)
Length = 651
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L +LE FQ HY R+++A + LSEA+V+V
Sbjct: 556 LKKLEKRFQANHYIVGEERQKIAKDLDLSEAQVKV 590
>SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30)
Length = 197
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE+ F+K HY R+++A ++LSE +++V
Sbjct: 103 LLHLENAFEKNHYIVGTERKQLASYLNLSETQIKV 137
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 339 SKGSSVPPLTSPTKHVLS*EVPGKRRKV 256
S GS PLTSPT+ + +V +RKV
Sbjct: 425 SPGSEAEPLTSPTQELNDMDVESTKRKV 452
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,444,241
Number of Sequences: 59808
Number of extensions: 355426
Number of successful extensions: 851
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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