Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0857
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    50   9e-08
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.7  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   3.0  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   7.0  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   7.0  

>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 49.6 bits (113), Expect = 9e-08
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = +1

Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
           L +LE+ F KTHYPDV LRE++A+++ L E RV+V
Sbjct: 199 LEQLEATFDKTHYPDVLLREKLAIKVDLKEERVEV 233


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 355 ELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
           ELE  F  T Y  +  + E+A  + LSE +V++
Sbjct: 229 ELEKEFHYTRYITIRRKAELAQNLQLSERQVKI 261


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
           L ELE  F    Y     R E+A R+ LSE +V++
Sbjct: 208 LLELEREFAGNMYLTRLRRIEIATRLRLSEKQVKI 242


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 650 FGVRSFRRVPRRWANPVFPGE 588
           F + SF+++ +R   PV PGE
Sbjct: 225 FALISFKKLAKRLRLPVLPGE 245


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 16/66 (24%), Positives = 26/66 (39%)
 Frame = +1

Query: 256 YLSPLPGDLLTEYMFGXXXXXXXXXXXXXXXLSELESLFQKTHYPDVFLREEVALRISLS 435
           Y   L G LL +++                   ELE  F   HY     R E+A  + L+
Sbjct: 217 YSESLAGTLLPDWIGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLT 276

Query: 436 EARVQV 453
           E ++++
Sbjct: 277 ERQIKI 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,145
Number of Sequences: 2352
Number of extensions: 12143
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)