Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0847
         (540 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella ve...    51   1e-05
UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;...    39   0.085
UniRef50_Q1JQ54 Cluster: LOC564510 protein; n=6; Danio rerio|Rep...    37   0.34 
UniRef50_A3LXJ0 Cluster: Bud neck involved protein; n=1; Pichia ...    33   3.2  
UniRef50_Q4RJ84 Cluster: Chromosome 1 SCAF15039, whole genome sh...    33   4.2  
UniRef50_Q2LUB9 Cluster: Hypothetical membrane protein; n=1; Syn...    32   7.3  
UniRef50_A4S5W9 Cluster: Predicted protein; n=2; Ostreococcus|Re...    32   7.3  
UniRef50_Q5ZIJ0 Cluster: BUD13 homolog; n=4; Gallus gallus|Rep: ...    32   7.3  
UniRef50_UPI00015530B0 Cluster: PREDICTED: hypothetical protein;...    32   9.7  
UniRef50_Q9CVP1 Cluster: Adult male testis cDNA, RIKEN full-leng...    32   9.7  
UniRef50_Q9VD20 Cluster: CG31169-PA, isoform A; n=5; Schizophora...    32   9.7  
UniRef50_A1DLZ0 Cluster: Glycosyl hydrolase family protein; n=2;...    32   9.7  

>UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 746

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +1

Query: 34  IVILLSTRGTAVSDIWFMHSAERPVVRSYH 123
           +VILLSTRGTA SD W +H AE+P+VRSYH
Sbjct: 660 VVILLSTRGTADSDNWHLHLAEKPMVRSYH 689


>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
           n=4; Eukaryota|Rep: Putative senescence-associated
           protein - Pisum sativum (Garden pea)
          Length = 282

 Score = 38.7 bits (86), Expect = 0.085
 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -3

Query: 169 ARLASA----LEAFRHNPADGSFXXXXXXXXX*TKCPKLRFLSY*AVLL 35
           AR+AS+    LEAF HNP  GSF          T C   RFLSY   LL
Sbjct: 4   ARIASSPDSDLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELL 52


>UniRef50_Q1JQ54 Cluster: LOC564510 protein; n=6; Danio rerio|Rep:
           LOC564510 protein - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 521

 Score = 36.7 bits (81), Expect = 0.34
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = -2

Query: 482 ESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*H 303
           +SP  G S+ + +HD+  P  +P++ R  S D S P+      PDL  +  + + KNR H
Sbjct: 139 DSP-EGSSVRKVRHDS--PDLSPKRARHDSPDLSPPKKGRHDSPDLSPQRPKTENKNRRH 195

Query: 302 RS 297
            S
Sbjct: 196 DS 197


>UniRef50_A3LXJ0 Cluster: Bud neck involved protein; n=1; Pichia
           stipitis|Rep: Bud neck involved protein - Pichia
           stipitis (Yeast)
          Length = 1404

 Score = 33.5 bits (73), Expect = 3.2
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -2

Query: 461 SLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEL-YPDLRSRDARVKKKNR*HRSPRSK 285
           S  +++ ++ L ++   ++     DY +  H+  + YPD  S + R + KNR H++ R  
Sbjct: 288 STKKAKRESFLMASGFSKDDSERVDYRKTTHKNNISYPDNMSENFRTRDKNR-HKNSREN 346

Query: 284 WASTSRLA 261
           +AS    A
Sbjct: 347 FASNETTA 354


>UniRef50_Q4RJ84 Cluster: Chromosome 1 SCAF15039, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
           SCAF15039, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 451

 Score = 33.1 bits (72), Expect = 4.2
 Identities = 21/77 (27%), Positives = 33/77 (42%)
 Frame = +3

Query: 54  ERNRSFGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCD 233
           E  R+      A+ +A GGA   SA  C N   + +S + +    + V+  +S  SK   
Sbjct: 301 ESQRTASAASQAIQQALGGASTSSAFPCENGGPSSSSSSSAPVSQIPVKSSDSPPSKGVS 360

Query: 234 FTSRVSHSKRETRRRSP 284
             S +   KR+    SP
Sbjct: 361 DISHLVRKKRKPEEESP 377


>UniRef50_Q2LUB9 Cluster: Hypothetical membrane protein; n=1;
           Syntrophus aciditrophicus SB|Rep: Hypothetical membrane
           protein - Syntrophus aciditrophicus (strain SB)
          Length = 90

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -3

Query: 289 PNGLRRRVSRFECETRLVKS--HCLEPPDSRGSTV 191
           P+ ++R V  + CE+R+ +S  HCL  P SRG+ +
Sbjct: 31  PSYIKRGVPAYRCESRVGQSNFHCLNIPSSRGTEI 65


>UniRef50_A4S5W9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 689

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = +3

Query: 87  ALGR-AAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKR 263
           ALGR AA  +    A     A        +    +L   PRE   ++      R + S+R
Sbjct: 11  ALGRPAASSSTALDASARAFAPTTRGRKGQRADFLLCFAPRERPEARATRRERRGARSER 70

Query: 264 ETRRRSPFGSRRSMLSVF 317
           E RRR P G+R S  ++F
Sbjct: 71  EARRRKPRGARSSSRALF 88


>UniRef50_Q5ZIJ0 Cluster: BUD13 homolog; n=4; Gallus gallus|Rep:
           BUD13 homolog - Gallus gallus (Chicken)
          Length = 559

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = -2

Query: 452 RSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSPRSKWAST 273
           R +HD +   + PR++R  S D S PR +    PDL S   R +  +     PR K   +
Sbjct: 184 RKRHDDSPDLSPPRRKRHDSPDLSPPRRKRHDSPDL-SPPRRQRHDSPDPSPPRKKRHDS 242

Query: 272 SRLAF*MRNATSKVTLFRASR 210
             L+   +  T  ++L R  R
Sbjct: 243 PDLSPQEQQTTPDLSLQRKKR 263


>UniRef50_UPI00015530B0 Cluster: PREDICTED: hypothetical protein;
           n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 107

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +3

Query: 201 PRESGGSKQCDFTSRV---SHSKRETRRRSPFGSRRSMLSVFFLNTCITAPKVRI*LSSM 371
           PR+SG  + C  T R    S+++ E +R S    R +  S   +     AP+    LSS 
Sbjct: 30  PRDSGDRQSCGTTRRSPTSSNAQEEPQRTSGGHERPAESSPEPIGAAPAAPE----LSSK 85

Query: 372 SGLGIVCRRLPFL 410
             +G VCR  PFL
Sbjct: 86  PRVGSVCRGFPFL 98


>UniRef50_Q9CVP1 Cluster: Adult male testis cDNA, RIKEN full-length
           enriched library, clone:1700111A04 product:hypothetical
           protein, full insert sequence; n=3; Murinae|Rep: Adult
           male testis cDNA, RIKEN full-length enriched library,
           clone:1700111A04 product:hypothetical protein, full
           insert sequence - Mus musculus (Mouse)
          Length = 100

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +3

Query: 201 PRESGGSKQCDFTSRV---SHSKRETRRRSPFGSRRSMLSVFFLNTCITAPKVRI*LSSM 371
           PR+SG  + C  T R    S+++ E +R S    R +  S   +     AP+    LSS 
Sbjct: 23  PRDSGDRQSCGTTRRSPTSSNAQEEPQRTSGGHERPAESSPEPIGAAPAAPE----LSSK 78

Query: 372 SGLGIVCRRLPFL 410
             +G VCR  PFL
Sbjct: 79  PRVGSVCRGFPFL 91


>UniRef50_Q9VD20 Cluster: CG31169-PA, isoform A; n=5; Schizophora|Rep:
            CG31169-PA, isoform A - Drosophila melanogaster (Fruit
            fly)
          Length = 1469

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = +3

Query: 147  SKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRR 299
            SK EA +    KD+   EP ES  SK+   TS  S SK+E++R+     RR
Sbjct: 1218 SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKRKQKRSLRR 1266


>UniRef50_A1DLZ0 Cluster: Glycosyl hydrolase family protein; n=2;
           Trichocomaceae|Rep: Glycosyl hydrolase family protein -
           Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 647

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
 Frame = -3

Query: 481 NHLAQG*VSTDRSTTLLYRAQHPARNGSRLQTIP-SPDIELSYIRTFGAVMHVLRKKTDS 305
           +H+ +   S   S T +   +H    G+R++T+   PD  L+ +RT    +H+ + +  S
Sbjct: 400 HHVKRAHQSKLESITSIETERHS--QGTRVRTLSIRPDPRLNILRTSARELHLSKVQLGS 457

Query: 304 IDLRDPNGLRRRVSRFECE-TRLVKSHC 224
           +  + P  L  R +R+E   T ++  HC
Sbjct: 458 VAHQPPAFLPLRTARWELNATFVIGKHC 485


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,074,380
Number of Sequences: 1657284
Number of extensions: 10857769
Number of successful extensions: 32928
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32914
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)