Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0846
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 224 6e-59
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 119 2e-27
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 119 2e-27
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 119 2e-27
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 117 7e-27
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 104 5e-23
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 104 7e-23
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 103 1e-22
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 103 1e-22
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 102 3e-22
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 102 3e-22
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 102 3e-22
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 101 5e-22
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 101 5e-22
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 7e-22
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 100 9e-22
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 100 9e-22
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 99 2e-21
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 98 6e-21
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 97 1e-20
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 94 1e-19
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 89 2e-18
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 86 2e-17
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 85 6e-17
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 83 1e-16
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 83 3e-16
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 82 3e-16
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 82 3e-16
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 82 3e-16
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 81 1e-15
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 81 1e-15
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 78 5e-15
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 77 9e-15
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 75 4e-14
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 75 7e-14
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 73 2e-13
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 71 6e-13
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 71 8e-13
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 71 8e-13
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 67 1e-11
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 62 5e-10
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 60 1e-09
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 57 1e-08
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 56 3e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 56 3e-08
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 56 3e-08
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 56 3e-08
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 53 2e-07
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 52 4e-07
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 50 2e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 48 9e-06
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 47 2e-05
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 43 3e-04
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 42 3e-04
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 38 0.005
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 38 0.007
At3g59700.1 68416.m06661 lectin protein kinase, putative similar... 30 1.4
At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase famil... 30 1.9
At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase famil... 30 1.9
At3g59740.1 68416.m06665 receptor lectin kinase 3 (lecRK3) ident... 29 2.5
At1g33060.2 68414.m04076 no apical meristem (NAM) family protein... 29 2.5
At1g33060.1 68414.m04075 no apical meristem (NAM) family protein... 29 2.5
At3g05230.1 68416.m00571 signal peptidase subunit family protein... 28 5.8
At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ b... 28 7.6
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 224 bits (547), Expect = 6e-59
Identities = 95/145 (65%), Positives = 113/145 (77%)
Frame = +2
Query: 119 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLR 298
SGIA RLAEERK+WRK+HP GFVA+P DG++NLM W C IPGK GT WEGG + L
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLT 62
Query: 299 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLN 478
M F +DYPS PPKCKF FHPNVYPSGTVCLS+L+E+ WRPAIT+KQIL+GIQDLL+
Sbjct: 63 MHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLD 122
Query: 479 EPNVKDPAQAEAYTIYCQNRLEYDK 553
PN DPAQ + Y ++CQ+ +EY K
Sbjct: 123 TPNPADPAQTDGYHLFCQDPVEYKK 147
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 119 bits (286), Expect = 2e-27
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = +2
Query: 116 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 295
M+ A RL + K +KD P G P N N+M W I G + TPW+GG +KL
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDN-----NIMHWNALIFGPEDTPWDGGTFKL 55
Query: 296 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 475
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + +L IQ LL
Sbjct: 56 TLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAVLTSIQSLL 113
Query: 476 NEPNVKDPAQAEAYTIYCQNRLEYDK 553
+PN PA AEA ++ +N+ EY++
Sbjct: 114 CDPNPDSPANAEAARLFSENKREYNR 139
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 119 bits (286), Expect = 2e-27
Identities = 56/146 (38%), Positives = 81/146 (55%)
Frame = +2
Query: 116 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 295
MS A RL + K ++D P G P N N+M W I G TPW+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 296 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 475
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 476 NEPNVKDPAQAEAYTIYCQNRLEYDK 553
+PN PA +EA +Y +++ EY++
Sbjct: 114 CDPNPNSPANSEAARMYSESKREYNR 139
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 119 bits (286), Expect = 2e-27
Identities = 56/146 (38%), Positives = 81/146 (55%)
Frame = +2
Query: 116 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 295
MS A RL + K ++D P G P N N+M W I G TPW+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 296 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 475
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 476 NEPNVKDPAQAEAYTIYCQNRLEYDK 553
+PN PA +EA +Y +++ EY++
Sbjct: 114 CDPNPNSPANSEAARMYSESKREYNR 139
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 117 bits (282), Expect = 7e-27
Identities = 55/146 (37%), Positives = 81/146 (55%)
Frame = +2
Query: 116 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 295
MS A RL + K ++D P G P N N+M W I G TPW+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 296 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 475
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 476 NEPNVKDPAQAEAYTIYCQNRLEYDK 553
+PN PA +EA ++ +++ EY++
Sbjct: 114 CDPNPNSPANSEAARMFSESKREYNR 139
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 104 bits (250), Expect = 5e-23
Identities = 52/142 (36%), Positives = 80/142 (56%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F +FHPNV +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYE 135
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 104 bits (249), Expect = 7e-23
Identities = 43/112 (38%), Positives = 70/112 (62%)
Frame = +2
Query: 218 SLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 397
S N+ W I G GTP+EGG++ L + F DYP PPK F+ P++HPN+ G++C+
Sbjct: 33 SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICM 92
Query: 398 SLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 553
++L ++ W PA+ ++++LL I LL +PN DP E ++ NR ++D+
Sbjct: 93 NILKDK--WTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQ 142
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 103 bits (247), Expect = 1e-22
Identities = 51/142 (35%), Positives = 80/142 (56%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYE 135
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 103 bits (247), Expect = 1e-22
Identities = 51/142 (35%), Positives = 80/142 (56%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYE 135
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 102 bits (244), Expect = 3e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 31 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 85
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 86 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 143
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E +Y ++ +Y+
Sbjct: 144 NPDDPLVPEIAHMYKTDKNKYE 165
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 102 bits (244), Expect = 3e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E +Y ++ +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYE 135
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 102 bits (244), Expect = 3e-22
Identities = 50/142 (35%), Positives = 81/142 (57%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAE-----DMFHWQATIMGPPESPYAGGVFLVSIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F+ ++HPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRSKYE 135
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (242), Expect = 5e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E +Y ++ +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYE 135
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (242), Expect = 5e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E +Y ++ +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYE 135
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 101 bits (241), Expect = 7e-22
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRM 301
+AS R+ +E K +KD P + A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTI 55
Query: 302 IFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 481
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +
Sbjct: 56 HFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTD 113
Query: 482 PNVKDPAQAEAYTIYCQNRLEYD 550
PN DP E +Y +R +Y+
Sbjct: 114 PNPDDPLVPEIAHMYKTDRAKYE 136
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (240), Expect = 9e-22
Identities = 48/142 (33%), Positives = 81/142 (57%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E + ++D P A P + ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E IY +R++Y+
Sbjct: 114 NPDDPLVPEIAHIYKTDRVKYE 135
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (240), Expect = 9e-22
Identities = 48/142 (33%), Positives = 81/142 (57%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E + ++D P A P + ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E IY +R++Y+
Sbjct: 114 NPDDPLVPEIAHIYKTDRVKYE 135
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 99 bits (238), Expect = 2e-21
Identities = 49/142 (34%), Positives = 79/142 (55%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+A+ R+ +E K ++D P A P G ++ W+ I G +P+ GG++ + +
Sbjct: 1 MATRRILKELKELQRDPPVSCSA----GPTGE-DMFHWQATIMGPNESPYSGGVFLVNIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F +FHPN+ +G +CL +L ++ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDP 113
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E IY ++ +Y+
Sbjct: 114 NPDDPLVPEIAHIYKTDKTKYE 135
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 97.9 bits (233), Expect = 6e-21
Identities = 47/110 (42%), Positives = 64/110 (58%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 403
N+ W+ I G K T +EG Y+L + F +DYP PPK KFE FHPNV G +CL +
Sbjct: 63 NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDI 122
Query: 404 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 553
L ++ W A ++ ILL IQ LL EPN+ P +A ++ N+ EY K
Sbjct: 123 LQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW-SNQEEYRK 169
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 96.7 bits (230), Expect = 1e-20
Identities = 46/142 (32%), Positives = 77/142 (54%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R++ E + ++ P A P+ D + W+ I G +P+ GG++ + +
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEED----IFHWQATIMGPHDSPYSGGVFTVSID 56
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 484
F DYP PPK F+ ++HPN+ G++CL +L E+ W PA T ++LL I LL +P
Sbjct: 57 FSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQ--WSPAPTTSKVLLSICSLLTDP 114
Query: 485 NVKDPAQAEAYTIYCQNRLEYD 550
N DP E +Y ++ +Y+
Sbjct: 115 NPNDPLVPEIAHLYKVDKSKYE 136
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/110 (41%), Positives = 63/110 (57%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 403
N+ W+ I G K T +EG Y+L + F +DYP PK KFE FHPNV G +CL +
Sbjct: 64 NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDI 123
Query: 404 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 553
L ++ W A ++ ILL IQ LL EPN+ P +A ++ N+ EY K
Sbjct: 124 LQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW-SNQEEYRK 170
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 89.4 bits (212), Expect = 2e-18
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 400
NL IPG GTP+EGG +++ + D YP PPK +F ++HPN+ SG +CL
Sbjct: 31 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 90
Query: 401 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQN 535
+L ++ W PA+T+K L+ IQ LL+ P KDP A Y +N
Sbjct: 91 ILKDQ--WSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKN 133
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 403
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVYP G VC+S+
Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISI 92
Query: 404 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 550
L D W P T++ I+L I +L+ PN + PA EA + + R E+
Sbjct: 93 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFK 152
Query: 551 K 553
K
Sbjct: 153 K 153
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 84.6 bits (200), Expect = 6e-17
Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 403
N+ W +I G T +EGG + M F ++YP SPP F ++HPNVY G VC+S+
Sbjct: 34 NVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISI 93
Query: 404 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 550
L D W P T++ I+L I +L+ PN + PA EA + NR E+
Sbjct: 94 LHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFR 153
Query: 551 K 553
K
Sbjct: 154 K 154
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 83.4 bits (197), Expect = 1e-16
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 403
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVY G VC+S+
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 404 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 550
L D W P T++ I+L I +L+ PN + PA EA + R E+
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFK 184
Query: 551 K 553
K
Sbjct: 185 K 185
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/115 (35%), Positives = 65/115 (56%)
Frame = +2
Query: 209 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 388
P G NL W I G GTP+EGG++ L +IF DYP PPK F+ ++H NV +G
Sbjct: 60 PKGD-NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGD 118
Query: 389 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 553
+ +++L + W PA+TI ++L I+ + +P PA +Y +R ++D+
Sbjct: 119 LSVNILRD--SWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDE 171
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 82.2 bits (194), Expect = 3e-16
Identities = 40/114 (35%), Positives = 64/114 (56%)
Frame = +2
Query: 125 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 304
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 305 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 466
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++ L Q
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVTLIFQ 107
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 403
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 404 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 499
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 403
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 404 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 499
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 242 CA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 418
CA I G GTP+E GL+++++ D+P SPPK F +FHPNV +G +C++ L +K
Sbjct: 43 CADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL--KK 100
Query: 419 DWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEY 547
DW P++ ++ +L ++ LL EP + +A + +N EY
Sbjct: 101 DWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEY 143
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +2
Query: 248 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 427
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 65
Query: 428 PAITIKQILLGIQDLLNEPNVKDP 499
PA+ I+ +LL IQ LL+ PN DP
Sbjct: 66 PALQIRTVLLSIQALLSAPNPDDP 89
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 78.2 bits (184), Expect = 5e-15
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Frame = +2
Query: 116 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 295
+S IA RL +E W+ + P GF R N L W + G GT + Y L
Sbjct: 12 LSKIACNRLQKELSEWQVNPPTGFKHRVTDN------LQKWVIEVTGAPGTLYANETYNL 65
Query: 296 RMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 472
++ F YP P+ F PP HP++Y +G +CL +L + W PA+T+ + + I +
Sbjct: 66 QVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSM 123
Query: 473 L-NEPNVKDPAQAEAYTIYCQN 535
L + P + P + Y C+N
Sbjct: 124 LSSSPEKQRPTDNDRYVKNCKN 145
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 77.4 bits (182), Expect = 9e-15
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Frame = +2
Query: 131 SARLAEERKAWRKDHPFGFVARPMKNP-DGSLNLMTW---ECAIPGKKGTPWEGGLYKLR 298
S R+ +E K D P G + + +GS + T+ + I G + T + G++ L+
Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLK 67
Query: 299 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD--EEKDWRPAITIKQILLGIQDL 472
+ + YP PP F P++HPN+ SG +CL +L+ + W+P++ I +L ++ L
Sbjct: 68 IQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLL 127
Query: 473 LNEPNVKDPAQAEAYTIYCQNRLEYD 550
L+EPN D E Y NR +D
Sbjct: 128 LSEPNPDDGLMCEVSREYKYNRQTFD 153
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 75.4 bits (177), Expect = 4e-14
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = +2
Query: 116 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 295
+S IA RL +E W+ + P GF K D NL W + G GT + Y+L
Sbjct: 12 LSKIACNRLQKELSEWQLNPPTGF---RHKVTD---NLQKWTIDVTGAPGTLYANETYQL 65
Query: 296 RMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 472
++ F + YP P+ F P HP++Y +G +CL +L + W PA+T+ + + I +
Sbjct: 66 QVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYD--SWSPAMTVNSVCISILSM 123
Query: 473 L-NEPNVKDPAQAEAYTIYCQN 535
L + P + PA + Y C+N
Sbjct: 124 LSSSPAKQRPADNDRYVKNCKN 145
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 74.5 bits (175), Expect = 7e-14
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Frame = +2
Query: 116 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 295
+S IA+ RL +E W+ + P GF K D NL W + G GT + Y+L
Sbjct: 12 LSKIATNRLQKELVEWQMNPPTGF---KHKVTD---NLQRWIIEVIGAPGTLYANDTYQL 65
Query: 296 RMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 472
++ F + YP P+ F P HP++Y +G +CL +L + W PA+T+ I + I +
Sbjct: 66 QVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSICISILSM 123
Query: 473 LNEPNVKD-PAQAEAYTIYCQN 535
L+ K P + Y C+N
Sbjct: 124 LSSSTEKQRPTDNDRYVKNCKN 145
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Frame = +2
Query: 116 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 295
++ IA+ RL +E W+ + P GF R S NL W + G GT + Y+L
Sbjct: 12 LTKIATNRLQKEFMEWQTNPPSGFKHRV------SDNLQRWIIEVHGVPGTLYANETYQL 65
Query: 296 RMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 472
++ F + YP P+ F+ P HP++Y +G +CL +L + W PA+ + I L I +
Sbjct: 66 QVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYD--SWSPAMRLSSICLSILSM 123
Query: 473 LNEPNVKD-PAQAEAYTIYCQN 535
L+ +VK P + Y C++
Sbjct: 124 LSSSSVKQKPKDNDHYLKNCKH 145
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 71.3 bits (167), Expect = 6e-13
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 400
N+ W I G TP+EGG+++L + YP PP+ +F +FHPNV + +G +CL
Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLD 92
Query: 401 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEA 514
+L + W PA T++ + I L+ P P ++
Sbjct: 93 IL--KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDS 128
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/110 (30%), Positives = 55/110 (50%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 403
N+ WE + G G P+E G++ + + YP PPK F+ +FHPN+ G + + +
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 404 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 553
L W A+TI +LL I +L+ P A +Y ++R Y+K
Sbjct: 118 LGSR--WSSALTINLVLLSICSILSNPVEPLLVSNHAARLYQKDRKAYEK 165
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 70.9 bits (166), Expect = 8e-13
Identities = 36/109 (33%), Positives = 56/109 (51%)
Frame = +2
Query: 209 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 388
P+G +LM +E I +G + G + + YP PK K + ++HPN+ G
Sbjct: 54 PNGKNDLMNFEVTIKPDEGY-YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGN 112
Query: 389 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQN 535
VCL++L E DW+P + I ++ G+ L EPN +DP EA + N
Sbjct: 113 VCLNILRE--DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDN 159
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +2
Query: 224 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 403
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 404 LDEEKDWRPAITIKQILL 457
L ++ W PA+ I+ +LL
Sbjct: 93 LKDK--WSPALQIRTVLL 108
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +2
Query: 254 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 430
G K + +EGG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ--TWSP 95
Query: 431 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 553
+ + + LL PN DP EA + ++R Y++
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQ 137
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +2
Query: 254 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRP 430
G K + ++GG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ--TWSP 95
Query: 431 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 553
+ + + LL PN DP EA + ++R Y++
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQ 137
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 316
R+ +E + KD P R ++ ++L+ I G +GTP+ GL+ + F D
Sbjct: 336 RIQDEWRILEKDLPEMIFVRAYES---RMDLL--RAVIIGAQGTPYHDGLFFFDIFFPDT 390
Query: 317 YPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL-----DEEKDWRP-AITIKQILLGIQDL 472
YPS+PP + +PN+Y G VCLSLL ++ + W P T+ Q+L+ IQ L
Sbjct: 391 YPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGL 450
Query: 473 L--NEPNVKDP 499
+ +P +P
Sbjct: 451 ILNQKPYFNEP 461
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 316
RL +E +A K+ VARP N +++ W + G +GTP+ GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 317 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 463
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +2
Query: 248 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLD---- 409
I G +GTP+ GL+ + F D YPS PPK + +PN+Y G VCLSL+
Sbjct: 641 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLISTWTG 700
Query: 410 -EEKDWRP-AITIKQILLGIQDL-LNE-PNVKDP 499
+ + W P T+ Q+L+ IQ L LNE P +P
Sbjct: 701 KKREKWLPKESTMLQLLVSIQALILNEKPYYNEP 734
Score = 54.4 bits (125), Expect = 8e-08
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Frame = +2
Query: 248 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL----- 406
I G +GTP+ GL+ + F D YPS PP + +PN+Y G VCLSLL
Sbjct: 307 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAG 366
Query: 407 DEEKDWRP-AITIKQILLGIQDL-LNE-PNVKDPAQAEA 514
+ W P T+ Q+L+ IQ L LNE P +P ++
Sbjct: 367 SAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQS 405
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSL 403
I G +GTP+ GL+ + F D YPS PP + +PN+Y G V +S+
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 316
RL +E +A K+ VARP N +++ W + G +GTP+ GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 317 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 463
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +2
Query: 254 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 430
G + ++GG++K+++ + YP P F ++HPNV SG VCL ++++ W P
Sbjct: 38 GPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQ--TWSP 95
Query: 431 AITIKQILLG-IQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 550
+ + + LL PN DP EA ++ ++R Y+
Sbjct: 96 MFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYE 136
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 316
RL EE + K G V+ M + D L + +W I G T +EG +++L++ D
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDADDIL-MQSWTGTILGPHNTAYEGKIFQLKLFCGKD 73
Query: 317 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 490
YP SPP +F+ + V P +G V S +WR T++ +L+ + +++++ N
Sbjct: 74 YPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNR 133
Query: 491 K 493
K
Sbjct: 134 K 134
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 316
RL EE + K G V+ M + D + + +W I G T +EG +++L++ +
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDAD-DIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKE 73
Query: 317 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 490
YP SPP +F+ + V P +G V SL +WR T++ IL+ + ++++ N
Sbjct: 74 YPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNR 133
Query: 491 K 493
K
Sbjct: 134 K 134
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 248 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLDE--- 412
I G GTP++ GL+ DYPS PP + +PN+Y G VCLSLL+
Sbjct: 886 IVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTG 945
Query: 413 --EKDWRP-AITIKQILLGIQDLL 475
+ W P + +I Q+L+ +Q L+
Sbjct: 946 RGNEVWDPKSSSILQVLVSLQGLV 969
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 47.6 bits (108), Expect = 9e-06
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = +2
Query: 245 AIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEP--PLFHPNVYPSGTVCLSLLDE-- 412
A+ G GTP+ GL+ ++ YP PP + +PN+Y SG VCLSLL+
Sbjct: 697 ALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWS 756
Query: 413 ---EKDWRP-AITIKQILLGIQDL-LNE 481
+ W + +I Q+LL Q L LNE
Sbjct: 757 GSGTEVWNAGSSSILQLLLSFQALVLNE 784
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +2
Query: 128 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 307
A R+ +E K + + F++ P++ N+ W+ AI G T +EGG+Y R+
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEE-----NIFEWQFAIRGPGDTEFEGGIYHGRIQL 66
Query: 308 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 463
DYP PP P + + +CLS+ + + W+P+ +++ L+ +
Sbjct: 67 PADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVAL 117
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 316
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 74
Query: 317 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 454
YP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 YPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 121
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 316
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 75
Query: 317 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 466
YP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 YPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 126
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TPWEGGLYKLRMIFKD 313
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 74
Query: 314 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 454
DYP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 DYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 122
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 37.9 bits (84), Expect = 0.007
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TPWEGGLYKLRMIFKD 313
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 75
Query: 314 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 466
DYP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 DYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 127
>At3g59700.1 68416.m06661 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733
Length = 661
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -2
Query: 248 SHIPKSLNSMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFS 111
+H+ ++N + + S+ A + +DG + KLS++ V LS+ +S
Sbjct: 146 NHVGININGLRSVASASAGYYDDKDGSFKKLSLISREVMRLSIVYS 191
>At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase family
protein similar to Pyrrolidone-carboxylate peptidase
(Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
Prosite PS00141: Eukaryotic and viral aspartyl proteases
active site
Length = 94
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 565 AGTCNGCC*VNIRIGQWSVNELSHCLKSSINVKTGD*NSNTTLFW 699
+G C G C V G+ + ++L L+SS V +GD N+N T+ W
Sbjct: 45 SGLCLGSCSVLDTAGEGAKSKLYEVLESS--VVSGDKNNNGTVVW 87
>At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase family
protein similar to Pyrrolidone-carboxylate peptidase
(Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
Prosite PS00141: Eukaryotic and viral aspartyl proteases
active site
Length = 217
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 565 AGTCNGCC*VNIRIGQWSVNELSHCLKSSINVKTGD*NSNTTLFW 699
+G C G C V G+ + ++L L+SS V +GD N+N T+ W
Sbjct: 45 SGLCLGSCSVLDTAGEGAKSKLYEVLESS--VVSGDKNNNGTVVW 87
>At3g59740.1 68416.m06665 receptor lectin kinase 3 (lecRK3)
identical to receptor lectin kinase 3 [Arabidopsis
thaliana] gi|4100060|gb|AAD00733
Length = 659
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -2
Query: 248 SHIPKSLNSMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFS 111
+H+ ++N + + S+ A + DG + KLS++ V LS+ +S
Sbjct: 140 NHVGININGLTSVASASAGYYDDEDGNFKKLSLISTKVMRLSIVYS 185
>At1g33060.2 68414.m04076 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 652
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 290 YTAHLPMESPFYQVSHIPKSLNSMNHLDSS*ASRQNQRD 174
Y + P +S F Q SH+ ++++ N + SR+NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At1g33060.1 68414.m04075 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 648
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 290 YTAHLPMESPFYQVSHIPKSLNSMNHLDSS*ASRQNQRD 174
Y + P +S F Q SH+ ++++ N + SR+NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At3g05230.1 68416.m00571 signal peptidase subunit family protein
contains Pfam profile: PF04573 signal peptidase subunit
Length = 167
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 161 WRKDHPFGFVARPMKNPDGSLNLMT-WECAIPGKK 262
W F FVA + P SLN ++ W+ IP K+
Sbjct: 75 WNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKE 109
>At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ
boundaries domain protein 15 (LBD15) identical to
SP|Q8L5T5 LOB domain protein 15 {Arabidopsis thaliana};
similar to ASYMMETRIC LEAVES2 [Arabidopsis thaliana]
GI:19918971
Length = 224
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 137 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECA 247
++ E AW H + RPM P G+LN +T CA
Sbjct: 14 KIKREADAW--PHQMAGIRRPMSGPPGTLNTIT-PCA 47
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,422,986
Number of Sequences: 28952
Number of extensions: 361875
Number of successful extensions: 977
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -