Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0490
         (800 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RV25 Cluster: Predicted protein; n=1; Nematostella ve...    36   1.2  
UniRef50_Q73RD5 Cluster: Adenylate/guanylate cyclase catalytic d...    33   8.4  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   8.4  

>UniRef50_A7RV25 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 342

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 19  FLNFVIVTYFGEQNKSRFLYMFTKSFACC 105
           F NFVI   F E+ +S F Y F+K F CC
Sbjct: 289 FANFVIFCVFTEKMRSHFKYWFSKIFPCC 317


>UniRef50_Q73RD5 Cluster: Adenylate/guanylate cyclase catalytic
           domain protein; n=1; Treponema denticola|Rep:
           Adenylate/guanylate cyclase catalytic domain protein -
           Treponema denticola
          Length = 692

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +1

Query: 538 FDILIDKNAGIGSLVVQINTNLCQTLLHLFEIDDFFGLLKTLETICVNENIFDESHVRF 714
           +D+ +      G   +QI T     +L +  +DD+ G +  +E + V   + + S +RF
Sbjct: 371 YDLFVSLGIISGDFFIQIGTVFAVIILSIMVLDDYSGSITKIEDLSVEMKLINRSLIRF 429


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 22/79 (27%), Positives = 30/79 (37%)
 Frame = +2

Query: 176 PIDSPLSSSPDRHSGTRFRSNGRFREAXXXXXXXXXXXXXXRARAQLSVPV*LG*TLRLP 355
           P   P+         +RFRS+GRF EA                    + P   G   RLP
Sbjct: 70  PKTQPMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNRPRVAGIAFRLP 129

Query: 356 ANRHGKSNISDYFAAEPKQ 412
           ANR+ +  +     A PK+
Sbjct: 130 ANRYEEKTVCSQINANPKR 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,720,065
Number of Sequences: 1657284
Number of extensions: 16055681
Number of successful extensions: 29632
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29627
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)