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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1464
         (796 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g34000.2 68417.m04825 ABA-responsive element-binding protein ...    32   0.50 
At4g34000.1 68417.m04824 ABA-responsive element-binding protein ...    32   0.50 
At5g58830.1 68418.m07372 subtilase family protein contains simil...    31   1.2  
At3g30540.1 68416.m03865 (1-4)-beta-mannan endohydrolase family ...    29   2.7  
At5g64040.1 68418.m08040 photosystem I reaction center subunit P...    29   4.7  
At5g63260.1 68418.m07940 zinc finger (CCCH-type) family protein ...    28   8.2  

>At4g34000.2 68417.m04825 ABA-responsive element-binding protein /
           abscisic acid responsive elements-binding factor (ABRE)
           / ABA-responsive elements-binding factor (ABF3)
           identical to abscisic acid responsive elements-binding
           factor (ABF3) GI:6739280 from [Arabidopsis thaliana];
           identical to cDNA abscisic acid responsive
           elements-binding factor (ABRE) mRNA, complete cds
           GI:6739279
          Length = 454

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
 Frame = +3

Query: 219 VPNMPRDPSRNPFTTREDLITLIV--ITTIQPKII-------HAERITITLELRLPRTQ* 371
           V N P+D S N    R+DL+T     +   QP+++         +++  T E   P+   
Sbjct: 219 VANQPQDLSGNGVAVRQDLLTAQTQPLQMQQPQMVQQPQMVQQPQQLIQTQERPFPKQTT 278

Query: 372 LTAPDT--PINRSIPATQDQTIR-SILG 446
           +   +T   +NRS PATQ Q ++ SILG
Sbjct: 279 IAFSNTVDVVNRSQPATQCQEVKPSILG 306


>At4g34000.1 68417.m04824 ABA-responsive element-binding protein /
           abscisic acid responsive elements-binding factor (ABRE)
           / ABA-responsive elements-binding factor (ABF3)
           identical to abscisic acid responsive elements-binding
           factor (ABF3) GI:6739280 from [Arabidopsis thaliana];
           identical to cDNA abscisic acid responsive
           elements-binding factor (ABRE) mRNA, complete cds
           GI:6739279
          Length = 449

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
 Frame = +3

Query: 219 VPNMPRDPSRNPFTTREDLITLIV--ITTIQPKII-------HAERITITLELRLPRTQ* 371
           V N P+D S N    R+DL+T     +   QP+++         +++  T E   P+   
Sbjct: 219 VANQPQDLSGNGVAVRQDLLTAQTQPLQMQQPQMVQQPQMVQQPQQLIQTQERPFPKQTT 278

Query: 372 LTAPDT--PINRSIPATQDQTIR-SILG 446
           +   +T   +NRS PATQ Q ++ SILG
Sbjct: 279 IAFSNTVDVVNRSQPATQCQEVKPSILG 306


>At5g58830.1 68418.m07372 subtilase family protein contains
           similarity to prepro-cucumisin GI:807698 from [Cucumis
           melo]
          Length = 671

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +3

Query: 453 TLSRTTLDQIILSDHTIQRNYHYYSKAHAATKADSNFTI 569
           TL   + D +I S  T+QRN +Y S +   ++++S+FT+
Sbjct: 546 TLKLISGDAVICSGKTLQRNLNYPSMSAKLSESNSSFTV 584


>At3g30540.1 68416.m03865 (1-4)-beta-mannan endohydrolase family
           similar to (1-4)-beta-mannan endohydrolase GI:10178872
           from [Coffea arabica]
          Length = 351

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -3

Query: 353 SQFEGNCNSFCVDDLRLYCGNDDQGNKVFSGSK--WVSRWITGHVRNSMMSI 204
           + F  N N   +D   ++CG+D    ++   S+  ++ RW+ GH+ ++  ++
Sbjct: 247 ADFIANHNIDAIDFASMHCGSDLWFQRLDQNSRLAFIKRWLEGHIEDAQNNL 298


>At5g64040.1 68418.m08040 photosystem I reaction center subunit
           PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
           SP:P49107; Plant Physiol. 109 (3), 1126 (1995); similar
           to SP|P31093 Photosystem I reaction centre subunit N,
           chloroplast precursor (PSI- N) {Hordeum vulgare}
          Length = 171

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = -1

Query: 373 SYCVRGS----LNSRVIVIRSAWMIFGCIVVMTIRVIRSSRVVNGFLDGSRG 230
           SY + GS    LN +V ++ S+ + FG    M + VI++ RVV   +DGS G
Sbjct: 12  SYAIAGSGSVELNQKVGLVNSS-VGFGQKKQMIMPVIKAQRVVGDDVDGSNG 62


>At5g63260.1 68418.m07940 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 435

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 440 DRPDSLVLGSWDTPVYRGIGGG 375
           + PD   +G  D+P+YRG  GG
Sbjct: 218 NHPDPTAIGGVDSPLYRGNNGG 239


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,343,711
Number of Sequences: 28952
Number of extensions: 331807
Number of successful extensions: 755
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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