Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1450
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.57 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    25   0.57 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   7.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   7.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   7.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 127 YVANY*DSKIFLSNFCDTHVISVSLV*VKLWRRTNLNTRLCRICS 261
           ++ N+  SK F  N CD   ++ S++   +   +N+    CR CS
Sbjct: 249 HLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCS 293



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 17/68 (25%), Positives = 24/68 (35%)
 Frame = +2

Query: 245 SAESAHHIALDCIQPQTTHGSPYHVHPYPSPVRLQHAFQAQSSPKLFHPKGLKPHLDART 424
           S++++  +      PQT     Y     P      +     +S  L  PK  K   D  T
Sbjct: 69  SSDTSQDLQHSYQSPQTQPARFYSTPIVPHFAYNHNPLTPPNSEPLVSPKSEKEEKDMET 128

Query: 425 FATPQESP 448
             TP  SP
Sbjct: 129 TLTPCASP 136


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 127 YVANY*DSKIFLSNFCDTHVISVSLV*VKLWRRTNLNTRLCRICS 261
           ++ N+  SK F  N CD   ++ S++   +   +N+    CR CS
Sbjct: 7   HLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCS 51


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 177 YSCHICESCIGQIMEENKSKHKTLQN 254
           Y CH+C S I ++ +  +  HK   N
Sbjct: 648 YICHVCCSTIHEVSKAGELIHKIETN 673



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 183 CHICESCIGQIMEENKSKHKTLQN 254
           CH+C S I ++ +  +  HK   N
Sbjct: 926 CHVCYSTIQEVSKSGELIHKIATN 949


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 490  DTRPGVYLNEKFQDSLTLNSDTDSLVAKISA 582
            + +P  YL+E FQ  +T    T S    ISA
Sbjct: 1383 ENKPIFYLDEAFQRRVTQIGSTSSNNPSISA 1413



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 494 VSGCLSV*GTKPCPALDS 441
           +S  LS+ GT+ CPA+ S
Sbjct: 154 LSEFLSLFGTETCPAIGS 171


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 490  DTRPGVYLNEKFQDSLTLNSDTDSLVAKISA 582
            + +P  YL+E FQ  +T    T S    ISA
Sbjct: 1383 ENKPIFYLDEAFQRRVTQIGSTSSNNPSISA 1413



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 494 VSGCLSV*GTKPCPALDS 441
           +S  LS+ GT+ CPA+ S
Sbjct: 154 LSEFLSLFGTETCPAIGS 171


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +2

Query: 278 CIQPQTTHGSPYHVHPYPSPVRLQHAFQAQSSPKLFHPKGLKPHL 412
           C++P      P     Y +   L      Q  P LFH  G + HL
Sbjct: 325 CVEPPCGQLDPTKEKLYDAIEALYGDMLKQFKPPLFHMGGDEVHL 369


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
 Frame = +1

Query: 301 RVTLPCTPLSLASQAAARLPGPEQSETVPS*RAQTSSGRSYFCYAARESSAGQGFVPHTE 480
           R+  P   L+ A  AAA +  PE  E V S    T   +S   Y       G G +  T 
Sbjct: 71  RLYYPIYKLNAAHLAAANILSPEDCELVLS--NPTHMEKSAI-YNLLHDWLGTGLLTSTG 127

Query: 481 RQPDTR-----PGVYLNEKFQDSLTLNSDTDSLV 567
            +  TR     P  + +   Q     N +TD LV
Sbjct: 128 LKWQTRRKILTPAFHFSILQQFVAIFNEETDKLV 161


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -2

Query: 468 HKALPSTGLSCGVAKVRASR*GLSPLGWNSFGLLWAW 358
           HK L       GV  ++    G    GW S  +L+A+
Sbjct: 56  HKLLLVLFRVLGVMPIQRGEIGRITFGWTSIPMLYAY 92


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -2

Query: 468 HKALPSTGLSCGVAKVRASR*GLSPLGWNSFGLLWAW 358
           HK L       GV  ++    G    GW S  +L+A+
Sbjct: 56  HKLLLVLFRVLGVMPIQRGEIGRITFGWTSIPMLYAY 92


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -2

Query: 468 HKALPSTGLSCGVAKVRASR*GLSPLGWNSFGLLWAW 358
           HK L       GV  ++    G    GW S  +L+A+
Sbjct: 56  HKLLLVLFRVLGVMPIQRGEIGRITFGWTSIPMLYAY 92


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
 Frame = +1

Query: 301 RVTLPCTPLSLASQAAARLPGPEQSETVPS*RAQTSSGRSYFCYAARESSAGQGFVPHTE 480
           R+  P   L+ A  AAA +  PE  E V S    T   +S   Y       G G +  T 
Sbjct: 71  RLYYPIYKLNAAHLAAANILSPEDCELVLS--NPTHMEKSAI-YNLLHDWLGTGLLTSTG 127

Query: 481 RQPDTR-----PGVYLNEKFQDSLTLNSDTDSLV 567
            +  TR     P  + +   Q     N +TD LV
Sbjct: 128 LKWQTRRKILTPAFHFSILQQFVAIFNEETDKLV 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,896
Number of Sequences: 336
Number of extensions: 3765
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)