Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1447
         (747 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g56490.1 68416.m06282 zinc-binding protein, putative / protei...    73   2e-13
At1g31160.1 68414.m03812 zinc-binding protein, putative / protei...    71   1e-12
At5g48545.1 68418.m06002 histidine triad family protein / HIT fa...    31   0.61 
At3g47200.1 68416.m05125 expressed protein contains Pfam profile...    29   3.3  
At1g11300.1 68414.m01298 S-locus lectin protein kinase family pr...    29   3.3  
At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transfera...    28   7.6  

>At3g56490.1 68416.m06282 zinc-binding protein, putative / protein
           kinase C inhibitor, putative similar to 14 kDa
           zinc-binding protein (Protein kinase C inhibitor, PKCI)
           [Zea mays] Swiss-Prot:P42856
          Length = 147

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +1

Query: 262 LQDAENNDNELLGHLMLVARSLGAQRA-PSGWRLVVNNGKDGAQSVYHLHLHVLGGRQMG 438
           L  AE    ++LG L+  A+ +  Q     G+R+V+N+G  G QSVYH+H+H++GGRQM 
Sbjct: 84  LSKAEERHIDILGRLLYTAKLVAKQEGLAEGFRIVINDGPQGCQSVYHIHVHLIGGRQMN 143

Query: 439 WPPG 450
           WPPG
Sbjct: 144 WPPG 147



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 30/71 (42%), Positives = 39/71 (54%)
 Frame = +3

Query: 78  SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQRQYIFLLFQSVES 257
           + E   A   T +  PTIFDKIISKEI + +++EDD  LAF DI PQ     LL   V  
Sbjct: 20  ASEKEAALAATPSDSPTIFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIPKVRD 79

Query: 258 KVAGCGEQRQR 290
            + G  +  +R
Sbjct: 80  GLTGLSKAEER 90


>At1g31160.1 68414.m03812 zinc-binding protein, putative / protein
           kinase C inhibitor, putative similar to 14 kDa
           zinc-binding protein (Protein kinase C inhibitor, PKCI)
           [Zea mays] Swiss-Prot:P42856
          Length = 187

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +1

Query: 262 LQDAENNDNELLGHLMLVARSLGAQRAP-SGWRLVVNNGKDGAQSVYHLHLHVLGGRQMG 438
           L  AE    E+LG L+  ++ +  +     G+R+V+NNG +  QSVYHLHLHVLGGRQM 
Sbjct: 124 LGKAEPRHVEVLGQLLHASKIVAEKEGILDGFRVVINNGVEACQSVYHLHLHVLGGRQMK 183

Query: 439 WPPG 450
           WPPG
Sbjct: 184 WPPG 187



 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
 Frame = +3

Query: 33  YDLSRGSAVAVKRPYSDEV--RRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFND 206
           Y  S+    + +  +++E   + A     T  PTIFDKII+KEI +DI+YED+  LAF D
Sbjct: 43  YTRSKRLICSTRAAHNEEAAAKAAASVADTGAPTIFDKIIAKEIPSDIVYEDENVLAFRD 102

Query: 207 IAPQRQYIFLLFQSVESKVAGCGEQRQR 290
           I PQ     L+   +   +   G+   R
Sbjct: 103 INPQAPVHVLVIPKLRDGLTSLGKAEPR 130


>At5g48545.1 68418.m06002 histidine triad family protein / HIT
           family protein contains Pfam profile PF01230:HIT domain;
           contains Prosite motif PS00892: HIT family signature.
          Length = 197

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 310 LVARSLGAQRAPSGWRLVVNNGKDGAQSVYHLHLHVL 420
           L++ ++        + L+VNNG    Q ++H H+H++
Sbjct: 113 LISNAIVKATGSDSFNLLVNNGAAAGQVIFHTHIHII 149



 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 102 ETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAP 215
           E++T     +F KII  E     +YEDD+CL   D  P
Sbjct: 42  ESSTLQNDCVFCKIIRGESPCLKLYEDDMCLCILDTNP 79


>At3g47200.1 68416.m05125 expressed protein contains Pfam profile
           PF03140: Plant protein of unknown function
          Length = 476

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = -1

Query: 669 HCVCCLSFFHSALEQQTT**YVAQ*SCLM*TERDWFHLENSEL*FYIKKGLNNRNTQFYA 490
           +CV    F+  +  + TT  Y+    CL+  E D   L N +L      G NN  ++F+ 
Sbjct: 329 NCVAFEQFYTDSSNEITT--YIVFMGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSEFFK 386

Query: 489 SFSARV 472
           + S  V
Sbjct: 387 TISKDV 392


>At1g11300.1 68414.m01298 S-locus lectin protein kinase family protein
            contains protein kinase domain, Pfam:PF00069; contains
            S-locus glycoprotein family domain, Pfam:PF00954
          Length = 1635

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +3

Query: 102  ETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQRQYIFLLFQSVESKVAGCGEQ 281
            E    + P IFD++  KEIR   ++   LC+   D A  R  +  +   + S+VA   E 
Sbjct: 1542 EINGMVDPEIFDQLFEKEIR-KCVHIALLCV--QDAANDRPSVSTVCMMLSSEVADIPEP 1598

Query: 282  RQRAARSLDAG 314
            +Q A    + G
Sbjct: 1599 KQPAFMPRNVG 1609


>At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 449

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
 Frame = +3

Query: 114 TIGPTIFDKIISKEIRADIIY--------EDDLCLAFNDIAPQRQYIFLLFQSV 251
           TIGPTI    + + I++D  Y        +D  C+ + D  PQ   +++ F S+
Sbjct: 221 TIGPTIPSIYLDQRIKSDTGYDLNLFESKDDSFCINWLDTRPQGSVVYVAFGSM 274


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,855,066
Number of Sequences: 28952
Number of extensions: 320354
Number of successful extensions: 812
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)