Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1440
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    25   0.64 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    25   0.64 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    25   0.64 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   0.85 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   0.85 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.9  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = -1

Query: 433 IILVVGYG*SKVLFAVNSLVSSSREIICTLLLYSSTK---LPRANLNLLSGLTDQFIEYN 263
           ++++VGY    +L  +N   +    ++ TL++  S     L    L  LS L + F  Y+
Sbjct: 101 LVVLVGYERFDIL--LNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYH 158

Query: 262 GHG-LGICIFLYVSCLNWYSNC 200
               L I   + ++C  WY NC
Sbjct: 159 TTAYLHIITMINMNCALWYINC 180


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = -1

Query: 433 IILVVGYG*SKVLFAVNSLVSSSREIICTLLLYSSTK---LPRANLNLLSGLTDQFIEYN 263
           ++++VGY    +L  +N   +    ++ TL++  S     L    L  LS L + F  Y+
Sbjct: 101 LVVLVGYERFDIL--LNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYH 158

Query: 262 GHG-LGICIFLYVSCLNWYSNC 200
               L I   + ++C  WY NC
Sbjct: 159 TTAYLHIITMINMNCALWYINC 180


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = -1

Query: 433 IILVVGYG*SKVLFAVNSLVSSSREIICTLLLYSSTK---LPRANLNLLSGLTDQFIEYN 263
           ++++VGY    +L  +N   +    ++ TL++  S     L    L  LS L + F  Y+
Sbjct: 101 LVVLVGYERFDIL--LNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYH 158

Query: 262 GHG-LGICIFLYVSCLNWYSNC 200
               L I   + ++C  WY NC
Sbjct: 159 TTAYLHIITMINMNCALWYINC 180


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 416 VRVIKGTFCSELTCVFIKGNYLYFIVVFLNK 324
           +R     FC  + C+ + GN +  IV+F  K
Sbjct: 67  IRTTSMVFCIIIMCLGVIGNVMVPIVIFKTK 97


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 416 VRVIKGTFCSELTCVFIKGNYLYFIVVFLNK 324
           +R     FC  + C+ + GN +  IV+F  K
Sbjct: 67  IRTTSMVFCIIIMCLGVIGNVMVPIVIFKTK 97


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 257 WAWYLYISLRFVPELVLELLC 195
           WA+Y     +FVPE + + LC
Sbjct: 646 WAFYRKAEGKFVPEHIDQRLC 666


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 125 LLCLI*IYL-FKY*TVHELLYLQLMYFII 42
           LLC+   Y  F   TVH L  L + YF++
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVV 138


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 243 QIPSPWPLYSMNWS 284
           Q+ S WPL+   W+
Sbjct: 111 QVASRWPLFLNEWT 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,675
Number of Sequences: 336
Number of extensions: 3503
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)