Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11j07
         (449 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0LJ22 Cluster: Putative uncharacterized protein precur...    33   2.9  
UniRef50_Q8I368 Cluster: Putative uncharacterized protein PFI040...    31   8.8  

>UniRef50_Q0LJ22 Cluster: Putative uncharacterized protein
           precursor; n=1; Herpetosiphon aurantiacus ATCC
           23779|Rep: Putative uncharacterized protein precursor -
           Herpetosiphon aurantiacus ATCC 23779
          Length = 451

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -3

Query: 258 QPFDRQPSPAPTQTTS*FFTLPLRKFRIFM 169
           +P++R+P PA T T   F TL L +FR+ M
Sbjct: 103 EPYEREPVPASTATFRVFNTLTLNEFRVVM 132


>UniRef50_Q8I368 Cluster: Putative uncharacterized protein PFI0400c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFI0400c - Plasmodium falciparum (isolate 3D7)
          Length = 352

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 22/81 (27%), Positives = 39/81 (48%)
 Frame = -2

Query: 247 SSAVTRTNTNNFVIFHAATS*IQNLYEL*IKTKQLSNR*IYYSYNTN*FYLI*LITINQL 68
           SS +T  NT NF+ F      I N+ ++ IK K+   +   Y+Y     Y+I  + I   
Sbjct: 74  SSNLTGENTRNFLFFFLFICHISNIIKMEIKKKKKKKK--KYTYIYIYIYVIISLIILTF 131

Query: 67  LKKNYKNLHNAQPLSDIFYFF 5
           L   Y ++  ++ +   +Y+F
Sbjct: 132 LDIKYNSIDYSKVILYPYYYF 152


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,874,512
Number of Sequences: 1657284
Number of extensions: 7421194
Number of successful extensions: 15203
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15198
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)