Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11d14
(721 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22310.1 68418.m02603 expressed protein 38 0.005
At3g03870.2 68416.m00400 expressed protein predicted using genef... 32 0.33
At3g03870.1 68416.m00399 expressed protein predicted using genef... 32 0.33
At1g56660.1 68414.m06516 expressed protein 31 0.58
At3g26990.1 68416.m03377 expressed protein contains Pfam domain,... 31 0.77
At2g02955.1 68415.m00243 expressed protein ; expression supporte... 31 0.77
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 31 0.77
At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal hydrolase-r... 31 1.0
At4g02220.1 68417.m00300 zinc finger (MYND type) family protein ... 30 1.3
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 29 2.3
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 29 4.1
At4g08990.1 68417.m01485 DNA (cytosine-5-)-methyltransferase, pu... 29 4.1
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 29 4.1
At1g64520.1 68414.m07314 26S proteasome regulatory subunit, puta... 28 5.4
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 28 5.4
At2g36420.1 68415.m04471 expressed protein 28 7.2
At5g33380.1 68418.m03963 hypothetical protein 27 9.5
At1g61080.1 68414.m06877 proline-rich family protein 27 9.5
At1g09770.1 68414.m01096 myb family transcription factor contain... 27 9.5
>At5g22310.1 68418.m02603 expressed protein
Length = 481
Score = 38.3 bits (85), Expect = 0.005
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Frame = +1
Query: 115 TDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEM-LARPTARRLRSLWDEKCAILPPER 291
T S++ VK+LK++ G + K + E+ AR + + L S DE+ E+
Sbjct: 187 TTSKELVKVLKRIGELGDDHKTASNRLISALLCELDRARSSLKHLMSELDEE----EEEK 242
Query: 292 RDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLV 471
R I+S EE E+ + +E R G T KE K KE +R+K
Sbjct: 243 RRLIESLQEE------AMVERKLRRRTEKMNRRLGRELT-EAKETERKMKEEMKREKRAK 295
Query: 472 NFSAQVAYHLCDYIAKGQKEMLVSNRLRSIADVVL-ERVAEILGEPK 609
+ +V L I +KEM + IADV+ ERV L E K
Sbjct: 296 DVLEEVCDELTKGIGDDKKEMEKEREMMHIADVLREERVQMKLTEAK 342
>At3g03870.2 68416.m00400 expressed protein predicted using
genefinder
Length = 266
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 67 LENKPEPLKSSKPELATDSEQNVKILKKV--DSEGSNQKIPPRLR 195
LE P P SKP L+TDS + ++ K+ D+E ++ KI P R
Sbjct: 84 LEPDPHPDPDSKPTLSTDSVSSPRVSFKIMKDTEFADMKIDPPAR 128
>At3g03870.1 68416.m00399 expressed protein predicted using
genefinder
Length = 234
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 67 LENKPEPLKSSKPELATDSEQNVKILKKV--DSEGSNQKIPPRLR 195
LE P P SKP L+TDS + ++ K+ D+E ++ KI P R
Sbjct: 84 LEPDPHPDPDSKPTLSTDSVSSPRVSFKIMKDTEFADMKIDPPAR 128
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.5 bits (68), Expect = 0.58
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +1
Query: 34 KKQIMPKTG-KKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMER 210
KK+ ++G ++ + KP+ K K E ++ ++ VK K+ +G +K ++ +
Sbjct: 178 KKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDE 237
Query: 211 V--EMLARPTARRLRSLWDEKCAILPPERRDKIKSALEE 321
EM + + + + DE CA ++ DK K +E
Sbjct: 238 TDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDE 276
>At3g26990.1 68416.m03377 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 513
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 37 KQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKI-PPRLRRNMERV 213
K ++ G++ P + + LA D QN + K + G K+ P LR +E
Sbjct: 39 KHVVETWGRQFHCAPREQRLAYLYLANDILQNSR-RKGSEFVGEFWKVLPDALRDMIENG 97
Query: 214 EMLARPTARRLRSLWDEK 267
+ R +ARRL ++W+E+
Sbjct: 98 DDFGRKSARRLVNIWEER 115
>At2g02955.1 68415.m00243 expressed protein ; expression supported
by MPSS
Length = 666
Score = 31.1 bits (67), Expect = 0.77
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +1
Query: 61 KKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRR 198
K +P+P+ S+P D+ + + + +SE N+++P ++R
Sbjct: 56 KHRRTEPQPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKR 101
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 31.1 bits (67), Expect = 0.77
Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 16/194 (8%)
Frame = +1
Query: 61 KKLENKPEPLKSSKPELATDSEQNVKILKKVDS-EGSNQKIPPRLRRNMERVEMLARPTA 237
+KLE+ + + ELA+ ++ + L++V+ +G + L R + L
Sbjct: 202 QKLEDVKKERDGLEAELASKAKDHESTLEEVNRLQGQKNETEAELEREKQEKPALLNQIN 261
Query: 238 RRLRSLWDEKCAI------------LPPERRDKIKSALEEDYFLSPEQTEQYFQALSESS 381
++L +++ A L ER IK L +DY + E E+Y + E+
Sbjct: 262 DVQKALLEQEAAYNTLSQEHKQINGLFEEREATIKK-LTDDYKQAREMLEEYMSKMEETE 320
Query: 382 KRWSGPGGTVNRKE--LIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKEMLVSN-RL 552
+R G V +E ++D ++ ++ + + ++ L + ++ + ++ +SN +L
Sbjct: 321 RRMQETGKDVASRESAIVDLEETVESLRNEVERKGDEIE-SLMEKMSNIEVKLRLSNQKL 379
Query: 553 RSIADVVLERVAEI 594
R V+ E+ E+
Sbjct: 380 RVTEQVLTEKEGEL 393
>At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF04780:
Protein of unknown function (DUF629), PF04781: Protein
of unknown function (DUF627)
Length = 1106
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 67 LENKPEPLKSSKPELATDSEQNVKILKKVDSEG-SNQKIPPRLRRNMERVEMLARPTARR 243
LEN +K + L D+E N+ K V+ +G Q P + + +R E L + +
Sbjct: 137 LENLKNDMKENLETLIKDAESNIADSKTVELKGLLQQDFEPEVLESKKRPE-LVKNEFKG 195
Query: 244 LRSLW 258
LRS W
Sbjct: 196 LRSFW 200
>At4g02220.1 68417.m00300 zinc finger (MYND type) family protein /
programmed cell death 2 C-terminal domain-containing
protein similar to SP|Q16342 Programmed cell death
protein 2 (Zinc finger protein Rp-8) {Homo sapiens};
contains Pfam profiles PF01753: MYND finger, PF04194:
Programmed cell death protein 2, C-terminal putative
domain
Length = 418
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 182 HHAYVVTWSGWKCWHGQRLVACALYGTKNAQFCLPKEE 295
H A + TW G W G +L C+ G KNA++C PK +
Sbjct: 183 HGAPLCTWCG--TWKGDKL--CS--GCKNARYCSPKHQ 214
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +1
Query: 76 KPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 255
KPE P + + S + +++G N++ + + +M+ + L P ++ L+S
Sbjct: 725 KPEKAPFFLPSIPSLSGDILFKANDSEADGENEENNKKDQNSMKNFDALESPFSKHLKSS 784
Query: 256 WDEK 267
WD K
Sbjct: 785 WDSK 788
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 28.7 bits (61), Expect = 4.1
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +1
Query: 187 RLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQTEQYF-Q 363
R+RR +E+ +ML R ++R + + ERR + + L E + E+Y +
Sbjct: 345 RIRRELEKQDMLRRKREEQIRKEMERQ----DRERRKEEERLLRE----KQREEERYLKE 396
Query: 364 ALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKEMLVS 543
+ E +R R E + +QKE +++K + A + IAK E++
Sbjct: 397 QMRELQRREKFLKKETIRAEKM-RQKEEMRKEKEVARLKAANERAIARKIAKESMELIED 455
Query: 544 NRL 552
RL
Sbjct: 456 ERL 458
>At4g08990.1 68417.m01485 DNA (cytosine-5-)-methyltransferase,
putative strong similarity to cytosine-5
methyltransferase (METII) [Arabidopsis thaliana]
GI:6523846; contains Pfam profiles PF01426: BAH domain,
PF00145: C-5 cytosine-specific DNA methylase
Length = 1512
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 133 VKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSA 312
+K KK+ +G N L + R++ + T R + +W E +I PE +
Sbjct: 578 IKRKKKILQKGKNLNPRAGLAHVVTRMKPMQATTTRLVNRIWGEFYSIYSPEVPSEAIHE 637
Query: 313 LEEDYFLSPEQTEQ 354
+EE+ E+ ++
Sbjct: 638 VEEEEIEEDEEEDE 651
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 28.7 bits (61), Expect = 4.1
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Frame = +1
Query: 76 KPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLR---RNMERVEMLAR-PTARR 243
K P SSK E+ E + ++ S S+Q P + E ++ + P +
Sbjct: 126 KSTPFNSSK-EIDYFQEYPISTSMELVSNNSDQVPQPEKSTPFNSYEEIDYIQDYPVSTS 184
Query: 244 LRSLWDEKCAILPPERRDKIKSALEEDYFLS-PEQTEQYFQALSESSKRWSGPGGTVNRK 420
+ + + + PPE+ + S+ E DYF P T + +S + + P +
Sbjct: 185 MELVSNNSDQVPPPEKSPPLNSSKEIDYFQEYPVSTS--MELVSNNIDQVPQP----EKS 238
Query: 421 ELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKEMLVSNRLRSIAD 567
++ KE+ Q++ V+ S ++ + D + + +K L+ N + IA+
Sbjct: 239 PPLNSSKEIDYFQEYPVSTSMELVSNNNDQVPQPEKSPLL-NSFKDIAN 286
>At1g64520.1 68414.m07314 26S proteasome regulatory subunit,
putative (RPN12) similar to 26S proteasome regulatory
complex subunit p30 GB:AAF08395 GI:6434966 from
[Drosophila melanogaster]
Length = 267
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 616 EMVSVLPIFQRLSPAQRQRCFSTCSILASLFVLLLCNHTSGMPPVR*N*P 467
++ V F+R A ++ ++TCS L S +LL TS +PP+ N P
Sbjct: 4 QLTEVSQQFERFKAAFARKDYNTCSDLLSQLKVLLTKFTS-LPPLFENSP 52
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 28.3 bits (60), Expect = 5.4
Identities = 26/115 (22%), Positives = 52/115 (45%)
Frame = +1
Query: 34 KKQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERV 213
KK + + K+ + LK+ E + + +N+K LKK++ E P + R +
Sbjct: 679 KKDSVTDSIKQTKRTKGALKAVSNEPESTTGKNLKSLKKLNGE------PDKTRGRTGKK 732
Query: 214 EMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQTEQYFQALSES 378
+ + + R++ DE+ + + D +K E D P++ E + Q L E+
Sbjct: 733 QKVTQAMHRKIEKDCDEQEDLETKDEEDSLKLGKESD--AEPDRMEDH-QELPEN 784
>At2g36420.1 68415.m04471 expressed protein
Length = 439
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/105 (22%), Positives = 44/105 (41%)
Frame = +1
Query: 172 QKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQTE 351
Q+ RL + + R E LA L E+ E ++ + + E+D + E
Sbjct: 287 QRAKRRLLKKLRRFEKLAGLDPVELEGKMSEE----EDEEEEEYEESEEDDNIRIYDSDE 342
Query: 352 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQ 486
+Y + + E+ R S RK+ ++QK+ + W V A+
Sbjct: 343 EY-EDVDEAMARESRCAEDEKRKKNDERQKKWRMMNAWRVGLGAE 386
>At5g33380.1 68418.m03963 hypothetical protein
Length = 154
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 139 ILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALE 318
I+ + D +GS P L+R + S W + PE + +K +E
Sbjct: 11 IVSRGDIDGSQSDTKPLLQRRKSHPPTIGEAGG----SSWQDA-----PEPQVLLKVKIE 61
Query: 319 EDYFLSPEQTEQYFQA 366
E YF +PE+TE+ QA
Sbjct: 62 ELYF-APEETEKLLQA 76
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 645 KSC*TSWI-RPRWFRFSQYFSDSLQHNVSD 559
KS SWI P W S+Y+S S+ N SD
Sbjct: 175 KSIGDSWIDNPEWIAKSKYWSSSVGKNQSD 204
>At1g09770.1 68414.m01096 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 844
Score = 27.5 bits (58), Expect = 9.5
Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Frame = +1
Query: 49 PKTGKKLENKPEPLKSSKPELATDSEQNVKILK-KVDSEGSNQKIPPR----LRRNMERV 213
PK ++ +P P +S +PE + + + +I + K + E Q + + L+R++ R
Sbjct: 487 PKNEYQIVAQPPPEESEEPEEKIEEDMSDRIAREKAEEEARQQALLKKRSKVLQRDLPRP 546
Query: 214 EMLARPTARR-LRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRW 390
+ R L S +K +++PP + + E+ E + L + +++
Sbjct: 547 PAASLAVIRNSLLSADGDKSSVVPPTPIEVADKMVREELLQLLEHDNAKY-PLDDKAEKK 605
Query: 391 SGPGGTVNR 417
G NR
Sbjct: 606 KGAKNRTNR 614
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,742,569
Number of Sequences: 28952
Number of extensions: 336554
Number of successful extensions: 1187
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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