Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d11
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    25   0.28 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.28 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   0.84 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    23   1.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   2.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   5.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 97  YFVTNLQSLQW 129
           YFVTNLQ +QW
Sbjct: 445 YFVTNLQVIQW 455


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 97  YFVTNLQSLQW 129
           YFVTNLQ +QW
Sbjct: 452 YFVTNLQVIQW 462


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 299 PLVSWSATPASATNTPSLATARL 231
           P V WSATP  A +TP+  T  L
Sbjct: 174 PQVQWSATP-QAGSTPTYQTQGL 195


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 330 RCRHCDRKY 356
           RC HCDR++
Sbjct: 39  RCEHCDRQF 47


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 330 RCRHCDRKY 356
           RC HCDR++
Sbjct: 192 RCEHCDRQF 200


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -1

Query: 169 QRVLHILRLRRHFAIVNSV--NLLQNK 95
           Q V+  + LRR FA++NS+   L +NK
Sbjct: 471 QFVVANIILRRRFALINSILRKLYKNK 497


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -3

Query: 308 PTPPLVSWSATPASATNTPSLATARLPH 225
           PTP  ++ + + +S+ ++PS+  A  PH
Sbjct: 156 PTPVSINNNTSTSSSASSPSVTAA--PH 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,521
Number of Sequences: 336
Number of extensions: 1938
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)