Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11d04
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 31 1.0
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 31 1.0
SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_57442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037) 30 1.8
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_5096| Best HMM Match : NAD_binding_6 (HMM E-Value=0.044) 29 2.4
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_54877| Best HMM Match : NAD_binding_4 (HMM E-Value=0) 29 4.1
SB_32286| Best HMM Match : Extensin_2 (HMM E-Value=5.9) 29 4.1
SB_15063| Best HMM Match : Fez1 (HMM E-Value=0.17) 29 4.1
SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24) 28 5.4
SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11) 28 5.4
SB_11551| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 7.2
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 28 7.2
SB_41099| Best HMM Match : VWA (HMM E-Value=0) 27 9.5
SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7) 27 9.5
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +3
Query: 123 FVTNTHNDYQ--WPFPKPIVGKPCEPPTPSGAPPAQRA--PVAPYCHCDAHSYSPRVEQY 290
F+ H Y PF P +P PPTPS PP Q + P AP SY P Y
Sbjct: 164 FILRQHPSYPPTQPFYPPT--QPFYPPTPSSYPPTQPSYPPTAPSYPPTPSSYPPIAASY 221
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 153 WPFPKPIVG-KPCEPPTPSGAPPAQRA--PVAPYCHCD 257
+P P+P +P PPTPS PP Q + P AP+ D
Sbjct: 530 YPPPQPYPPTQPSYPPTPSSYPPTQPSYPPTAPFLSAD 567
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +3
Query: 183 PCEPPTPSGAPPAQ--RAPVAPYCHCD 257
P PPTPS PP Q P AP+ D
Sbjct: 233 PSYPPTPSSYPPTQPSHPPTAPFLSSD 259
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAPVAP 242
P P P P PP P+ AP A P AP
Sbjct: 53 PPPSPPAAAPAAPPPPAAAPAAPPPPAAP 81
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Frame = +3
Query: 360 VTNDILDHPCDDLDSKMTTMYQATYKKRSFPVADYRTIMASSQSSAPIPVESNRLG---- 527
++ D +P D + T A Y+ R+ P RT+ S P P G
Sbjct: 478 LSTDFPTNPVGRHDGRRPTPMAAAYQSRTHPSTPPRTVPPQRPSELPFPCTPETNGRMKD 537
Query: 528 -LLRCYKDPTHFSENPPKVRPSIH-PPAPIH 614
LL Y T F+ P + P + PP IH
Sbjct: 538 WLLERYASST-FNTCPHRALPCMDGPPIEIH 567
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPA----QRAPVAP 242
P P+P KP PP P+ PP Q +P+AP
Sbjct: 282 PSPQPTEAKPHTPPPPTSTPPTTAPRQPSPMAP 314
>SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +3
Query: 90 LDKLRISIKMDFVTNTHNDYQW--PFPKPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDAH 263
LD L I +K + N + P PKP P PPTP+ PP P+ P +
Sbjct: 267 LDNLDIYVKWPQLEEALNARRTRTPTPKPRTPTP-SPPTPT-PPPRSPTPLHP-----SS 319
Query: 264 SYSPRVEQYKQLLEKEQKLCQDYEQLRKQMVSVTN 368
+ Q +L++K + L + + L ++M N
Sbjct: 320 EALEALRQVGELMDKHEDLAERVDGLEEEMPKKAN 354
>SB_57442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +3
Query: 135 THNDYQWPFP-KPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDA 260
T DY WP P PI G P P P P AP DA
Sbjct: 35 TPRDYPWPAPTTPIGGPPIRTPIPLKETPTPALESAPAAMPDA 77
>SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037)
Length = 396
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 282 EQYKQLLEKEQKLCQDYEQLRKQMVSVTNDILDHPCDDLDSKM 410
E+Y++L K QK+ +DYE+ +M +L+ + ++K+
Sbjct: 24 EKYQELQAKSQKMQEDYERQLTEMEEAREQVLEELTEYYENKL 66
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/46 (30%), Positives = 30/46 (65%)
Frame = +3
Query: 279 VEQYKQLLEKEQKLCQDYEQLRKQMVSVTNDILDHPCDDLDSKMTT 416
+EQYKQLL++++ + + R+Q+ + TN+ L H +L ++++
Sbjct: 1919 LEQYKQLLQEKEARLGEVAREREQL-NKTNEQLQHKVFELQGELSS 1963
>SB_5096| Best HMM Match : NAD_binding_6 (HMM E-Value=0.044)
Length = 261
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 438 KRSFPVADYRTIMASSQSSAPIPVESNRLGLLRCYKDPTHFSE-NPPKVRPSIHPPAPIH 614
+RSF +MA +S AP+P + R L E NP +R SI AP
Sbjct: 121 QRSFGKPKIPLLMAGKESYAPVPTPAKRRRLTHIAHARISLRERNPDALRLSILSTAPRR 180
Query: 615 TGV 623
GV
Sbjct: 181 DGV 183
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 312 QKLCQDYEQLRKQMVSVTN----DILDHPCDDLDSKMTTMYQATYKKRSFPVADYRTIMA 479
+K C+ Y++LRK+ + N DI D+LD+ + Q + ++ ADY T A
Sbjct: 386 EKNCKLYDKLRKREAFLENYKKEDIFKENLDELDNSREVVQQLIDEYQAASKADYITWGA 445
Query: 480 SSQSS 494
SS
Sbjct: 446 QKGSS 450
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 168 PIVGKPCEPPT-PSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLR 344
P G P + P P+GAPP AP Y +SY+ +V + ++ +Q R
Sbjct: 1461 PSQGNPTQAPAYPTGAPPTAAAP--SYMPSGQNSYNAQVHRNPPFTVNIPPKPEEAQQNR 1518
Query: 345 KQMVSVTNDILDHP 386
+ + ++ + +HP
Sbjct: 1519 NETIKISL-VDNHP 1531
>SB_54877| Best HMM Match : NAD_binding_4 (HMM E-Value=0)
Length = 373
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +3
Query: 243 YCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRKQMV-SVTNDILDH-PCDDLDSKMTT 416
Y +CD ++ Y +E E KL E + MV ++T ++D P +K
Sbjct: 138 YANCDRDVVDEKI--YPPSIEPE-KLISSLEWMSDDMVKAITPYVIDQRPNTYTFTKSLA 194
Query: 417 MYQATYKKRSFPVADYRTIMASSQSSAPIPVESNRLGLLRC 539
+ + PV+ +R + + P+PV S+ + + C
Sbjct: 195 EHVLLQEASGLPVSIFRPSIIGASFKEPLPVPSDGIPVYNC 235
>SB_32286| Best HMM Match : Extensin_2 (HMM E-Value=5.9)
Length = 535
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +3
Query: 180 KPCEPPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRK 347
+P PP S +R P AP H SP QY+ K QK + LRK
Sbjct: 91 EPGRPPE-SAERKKRRGPTAPQPGARTHRVSPETRQYRSRPPKGQKDRIPGQALRK 145
>SB_15063| Best HMM Match : Fez1 (HMM E-Value=0.17)
Length = 444
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 264 SYSPRVEQYKQLLEKEQKLCQDYEQLRKQ 350
+Y VEQ + L+E + ++C+++E+L+++
Sbjct: 301 NYRHIVEQQESLIEDDSRMCEEWERLQQE 329
>SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24)
Length = 421
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 162 PKPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQL 341
P P+ G+P PTP + P Q + A Y S Q+K + + +L + L
Sbjct: 190 PPPLPGRPTLEPTPEASAPKQESFEAIYDTVKMKKSSGYHNQFKAVQSQTFELKMENLSL 249
Query: 342 RKQM 353
K++
Sbjct: 250 GKEL 253
>SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11)
Length = 809
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 300 LEKEQKLCQDYEQLRKQMVSVTNDILDH 383
L+KE+K+ +D E L K +V T +LD+
Sbjct: 382 LDKERKIPEDLESLGKMLVRGTTTLLDY 409
>SB_11551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 453 VADYRTIMASSQSSAPIPVESNRLGLLRC 539
+A YRT + S+SSA + +ES L ++ C
Sbjct: 440 IAGYRTFITRSRSSAAVALESAFLVMINC 468
>SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 283 NNTNSCSKKNRNYAKTMNSCGNRWSASQM 369
NN N +KNRN + N+C N ++ + +
Sbjct: 110 NNDNKACEKNRNNNDSNNNCSNNYNRNNI 138
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 144 DYQWPFPKPIVGKPCEPPTPSGAPPAQRAP 233
DY P P P P PP P+ APP P
Sbjct: 219 DYLEPTPPPPAA-PAPPPPPAAAPPPPPPP 247
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAPVAP 242
P P P P PP PS PP Q P P
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPP 400
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAPVAP 242
P P P P PP P PPA R AP
Sbjct: 412 PPPPPPPAPPPPPPPPPPPPPALRLACAP 440
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAPVAP 242
P P+P P PP PS +PP P P
Sbjct: 207 PPPRPPPSPPPPPPPPSPSPPRPPPPPPP 235
>SB_41099| Best HMM Match : VWA (HMM E-Value=0)
Length = 3373
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 162 PKPIVGKPCEPPTPSGAPPAQRAPVA 239
P+PI KP PPT PP R P A
Sbjct: 103 PQPITPKPV-PPTVPTRPPVPRPPAA 127
>SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7)
Length = 434
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 276 RVEQYKQLLEKEQKLCQDYEQLRKQMVSV 362
+ E KQL+EKE+K Q YE+ K+ + +
Sbjct: 120 QTELEKQLIEKEKKKQQAYEEFLKEKLMI 148
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +3
Query: 162 PKPIVGKPCEPPTPSGAPPAQRAPV-----APYCHCDAHSYSPRVEQ 287
P + PC PP AP AP+ AP + H++S +V+Q
Sbjct: 1371 PCATMAAPCAPPVMMAAPAPMLAPMLAPMPAPCAPPECHTHSVQVKQ 1417
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 165 KPIVGKPCEPPTPSGAPPAQRAPVAP 242
+P +P PP +G+ PAQ PVAP
Sbjct: 1841 QPARPQPPAPPMHAGSIPAQSIPVAP 1866
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAP 233
P P P KP PP P+ PP P
Sbjct: 365 PPPPPPTNKPPPPPPPTNGPPPPPPP 390
>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 90 LDKLRISIKMDFVTNTHNDYQWPFPKPIVGKPCEP--PTPSGAPPAQRAP 233
L++LR+ I V N + P P P+ PC P P P PP AP
Sbjct: 343 LNRLRLQIA-SLVANPPSTPA-PTPAPLSSTPCAPFAPPPPPPPPPPPAP 390
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,604,184
Number of Sequences: 59808
Number of extensions: 357926
Number of successful extensions: 1733
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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