Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c22
         (554 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0CI05 Cluster: Chromosome undetermined scaffold_186, w...    34   2.6  
UniRef50_A6E6N5 Cluster: Cell-division inhibitor; n=1; Pedobacte...    33   3.4  
UniRef50_A7Q1A3 Cluster: Chromosome chr10 scaffold_43, whole gen...    33   3.4  
UniRef50_UPI000045BA11 Cluster: COG3409: Putative peptidoglycan-...    33   4.5  
UniRef50_Q9CTX4 Cluster: Adult male testis cDNA, RIKEN full-leng...    33   5.9  
UniRef50_Q2UY13 Cluster: Nucleoporin; n=1; Lotus japonicus|Rep: ...    33   5.9  
UniRef50_Q3SUP7 Cluster: Putative uncharacterized protein; n=1; ...    32   7.8  
UniRef50_Q9W1K3 Cluster: CG13560-PA; n=2; Drosophila melanogaste...    32   7.8  
UniRef50_A0CVQ1 Cluster: Chromosome undetermined scaffold_29, wh...    32   7.8  
UniRef50_Q08853 Cluster: Calcium-transporting ATPase; n=13; Plas...    32   7.8  

>UniRef50_A0CI05 Cluster: Chromosome undetermined scaffold_186,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_186,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 365

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +2

Query: 245 TSAIKSVSNARANVPAPWTQLVAWGLLATAPEFSPKTRDLVTNVPEKHIENV 400
           TS+   + +   ++   W  LV  GL ATA  F+P   D++   P KH E +
Sbjct: 195 TSSALGIPDGFNSIQLLWVNLVTDGLPATALSFNPPDPDVMQKPPRKHDEPI 246


>UniRef50_A6E6N5 Cluster: Cell-division inhibitor; n=1; Pedobacter
           sp. BAL39|Rep: Cell-division inhibitor - Pedobacter sp.
           BAL39
          Length = 308

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 212 TGPDPRPVQNQTSAIKSVSNARANVPAP-WTQLVAWGLLATAPEFSPKTR 358
           T PDP+P +    AI+S  N    +P P W   V   L+ T  E   K+R
Sbjct: 228 TAPDPQPNKEVMKAIRSAYNIPVGLPTPAWLLSVGAALIGTEVELILKSR 277


>UniRef50_A7Q1A3 Cluster: Chromosome chr10 scaffold_43, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr10 scaffold_43, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 969

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 340 IQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKKC 459
           I  K  R SNK+ +K   KR++   K  SS  R + HK C
Sbjct: 359 ISKKRGRKSNKKGQKKRAKRVQDCDKDGSSNLRKKTHKGC 398


>UniRef50_UPI000045BA11 Cluster: COG3409: Putative
           peptidoglycan-binding domain-containing protein; n=1;
           Nostoc punctiforme PCC 73102|Rep: COG3409: Putative
           peptidoglycan-binding domain-containing protein - Nostoc
           punctiforme PCC 73102
          Length = 361

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +2

Query: 188 RQHAVCIATGPDPRPVQNQTSAIKSVSNARANVPAPWTQLVAWGLLATAPEFSPKT-RDL 364
           RQ    +AT P+PRP   + +A +    A ++ P P T   A   +AT+PE  P T R  
Sbjct: 189 RQAVTQVATSPEPRPTTPKKAATQV---ATSSEPRPATPKKATTQVATSPEPRPATPRKA 245

Query: 365 VTNVPEK 385
            T+  +K
Sbjct: 246 TTSSTQK 252


>UniRef50_Q9CTX4 Cluster: Adult male testis cDNA, RIKEN full-length
           enriched library, clone:4930425F17 product:similar to
           1700054O19RIK PROTEIN; n=7; Mus musculus|Rep: Adult male
           testis cDNA, RIKEN full-length enriched library,
           clone:4930425F17 product:similar to 1700054O19RIK
           PROTEIN - Mus musculus (Mouse)
          Length = 158

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 331 CARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           C  +Q  +S+  NK++R   RKR R   +++  E  W+
Sbjct: 50  CLHLQEPESKNKNKKARARERKRTRARKQEQEREKEWQ 87


>UniRef50_Q2UY13 Cluster: Nucleoporin; n=1; Lotus japonicus|Rep:
            Nucleoporin - Lotus japonicus
          Length = 1309

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 379  RKTHRKRIRKAYKQRSSESRWRPHKKCCVIL*KTSKKNIMYLSNLV 516
            RKTHRK +   +K+ SS+  W      C++   + ++ +  L N V
Sbjct: 1180 RKTHRKLLEDCWKKASSQDDWSKFHDSCMVEGWSDEETLQNLKNTV 1225


>UniRef50_Q3SUP7 Cluster: Putative uncharacterized protein; n=1;
           Nitrobacter winogradskyi Nb-255|Rep: Putative
           uncharacterized protein - Nitrobacter winogradskyi
           (strain Nb-255 / ATCC 25391)
          Length = 424

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           AR Q + + L  +R   THR+R  +A  + + E+ W+
Sbjct: 277 ARFQKRSATLGQRRMEMTHRQRAERAQLKATQETEWQ 313


>UniRef50_Q9W1K3 Cluster: CG13560-PA; n=2; Drosophila
           melanogaster|Rep: CG13560-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 181

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 21/51 (41%), Positives = 27/51 (52%)
 Frame = +1

Query: 286 PSAMDTVSRVGSPCDCARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 438
           PS   T S   SP D +   S  S  S+KR+RK  R+R R+  +QR  E R
Sbjct: 121 PSTSPTTST--SPSDSSSSGSSSSSSSSKRNRKERRRRYRR--RQRRQERR 167


>UniRef50_A0CVQ1 Cluster: Chromosome undetermined scaffold_29, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_29, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1284

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 317  GLLATAPEFSPKTRDLVTNVPEKHIENVFEKLTNNDLQNLDGAPIKNVVLSFKRQVKK 490
            G L+   + S  T DL+ N PE + +    KL ++  QN D    +N++ S K + K+
Sbjct: 845  GTLSKNQQDSDLTNDLINNQPESNQKKQSIKLIDHSEQNKDSQQEENILKSQKHEEKQ 902


>UniRef50_Q08853 Cluster: Calcium-transporting ATPase; n=13;
            Plasmodium (Laverania)|Rep: Calcium-transporting ATPase -
            Plasmodium falciparum (isolate K1 / Thailand)
          Length = 1228

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 248  SAIKSVSNARANVPAPWTQLVAWGLLATAPEFSPKTRDLVTNVPEKHIENVFEKLT 415
            +A+  + ++ A V   W  LV  GL ATA  F+P   D++   P    +N+   LT
Sbjct: 990  TALLGIPDSLAPVQLLWVNLVTDGLPATALGFNPPEHDVMKCKPRHKNDNLINGLT 1045


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,187,943
Number of Sequences: 1657284
Number of extensions: 10278876
Number of successful extensions: 29600
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29573
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)