Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c16
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    28   0.088
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.36 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 0.088
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 116 TVTQDKNFKSWA*KCVSE 169
           T+T+ KNF+ W  KCV E
Sbjct: 470 TITESKNFEPWREKCVVE 487


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 111  VGQSRKIKTLNPGLKNVSQKPLVPSEKKFL 200
            +G      TLNP  +   +KP+VPS +KF+
Sbjct: 1473 IGTGDPSDTLNPRTRG--EKPIVPSAEKFI 1500


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +1

Query: 442 GNRKSENY*QIIRELLFAYKALGCNMSLKIYFSDSLLDLFPENLGAVSDEYGERFHQDIM 621
           G+   +NY  +++EL  A++A    +        + + + P+N+ A  D      + D +
Sbjct: 215 GSEDKKNYVLLLKELREAFEAEAQEIKKPALLLSAAVPVGPDNIKAGYDVPAVSSYLDFI 274

Query: 622 HI-EKRYSGKW 651
           ++    + GKW
Sbjct: 275 NLMAYDFHGKW 285


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 128 LA*LSHSQRKRQNFVYPHCNPVSIATTFKSA 36
           +A  +HS   R+NF+Y   N +++A T K A
Sbjct: 37  IALYAHSSYGRENFIYGSMN-MTVAITDKIA 66


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 673 NQQALLLTISHCSVFQCALYPDETFHHIH 587
           ++  LL+ + H  + QC  + D    H H
Sbjct: 235 SKSKLLIPVGHIPIRQCDDHRDRPPRHFH 263


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 10  NSNYLWNICADL 45
           NSN L ++CADL
Sbjct: 187 NSNLLKSVCADL 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,391
Number of Sequences: 336
Number of extensions: 3757
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)