Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c11
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010247-1|AAQ23565.1| 1508|Drosophila melanogaster RE40452p pro...    29   4.5  
AJ312135-1|CAC39164.1| 1531|Drosophila melanogaster turtle prote...    29   4.5  
AE014134-715|AAF51029.3| 1508|Drosophila melanogaster CG15427-PD...    29   4.5  
X52892-1|CAA37074.1|  486|Drosophila melanogaster protein ( Dros...    29   5.9  
X12550-1|CAA31066.1|  396|Drosophila melanogaster protein ( Dros...    29   5.9  
AY095069-1|AAM11397.1|  486|Drosophila melanogaster RE15472p pro...    29   5.9  
AL009188-1|CAA15673.1|  486|Drosophila melanogaster EG:165H7.2,F...    29   5.9  
AE014298-31|AAF45502.1|  486|Drosophila melanogaster CG3258-PA p...    29   5.9  

>BT010247-1|AAQ23565.1| 1508|Drosophila melanogaster RE40452p protein.
          Length = 1508

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 331  KQKVTPKGVTIHYPQKKKKFSAFGTKSRRNIPGKTEKGPYAPNQRVTPN 477
            +  + P G+    P+ +   S FG+K+  N PG T +    P  R  P+
Sbjct: 1299 RNSMNPGGLEAS-PESRSSSSGFGSKNTSNHPGSTSEWRLLPPYRAPPS 1346


>AJ312135-1|CAC39164.1| 1531|Drosophila melanogaster turtle protein,
            isoform 4 protein.
          Length = 1531

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 331  KQKVTPKGVTIHYPQKKKKFSAFGTKSRRNIPGKTEKGPYAPNQRVTPN 477
            +  + P G+    P+ +   S FG+K+  N PG T +    P  R  P+
Sbjct: 1322 RNSMNPGGLEAS-PESRSSSSGFGSKNTSNHPGSTSEWRLLPPYRAPPS 1369


>AE014134-715|AAF51029.3| 1508|Drosophila melanogaster CG15427-PD,
            isoform D protein.
          Length = 1508

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 331  KQKVTPKGVTIHYPQKKKKFSAFGTKSRRNIPGKTEKGPYAPNQRVTPN 477
            +  + P G+    P+ +   S FG+K+  N PG T +    P  R  P+
Sbjct: 1299 RNSMNPGGLEAS-PESRSSSSGFGSKNTSNHPGSTSEWRLLPPYRAPPS 1346


>X52892-1|CAA37074.1|  486|Drosophila melanogaster protein (
           Drosophila melanogasterasense (ase) gene for asense
           protein. ).
          Length = 486

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 346 PKGVTIHYPQKKKKFSAFGTKSRRNIP 426
           PK  TI +P K +   +FGT  R+ +P
Sbjct: 130 PKAGTISHPHKSQSDQSFGTPGRKGLP 156


>X12550-1|CAA31066.1|  396|Drosophila melanogaster protein (
           Drosophila T8 gene ofachaete-scute complex (AS-C). ).
          Length = 396

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 346 PKGVTIHYPQKKKKFSAFGTKSRRNIP 426
           PK  TI +P K +   +FGT  R+ +P
Sbjct: 64  PKAGTISHPHKSQSDQSFGTPGRKGLP 90


>AY095069-1|AAM11397.1|  486|Drosophila melanogaster RE15472p
           protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 346 PKGVTIHYPQKKKKFSAFGTKSRRNIP 426
           PK  TI +P K +   +FGT  R+ +P
Sbjct: 130 PKAGTISHPHKSQSDQSFGTPGRKGLP 156


>AL009188-1|CAA15673.1|  486|Drosophila melanogaster
           EG:165H7.2,FBgn0000137;ase protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 346 PKGVTIHYPQKKKKFSAFGTKSRRNIP 426
           PK  TI +P K +   +FGT  R+ +P
Sbjct: 130 PKAGTISHPHKSQSDQSFGTPGRKGLP 156


>AE014298-31|AAF45502.1|  486|Drosophila melanogaster CG3258-PA
           protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 346 PKGVTIHYPQKKKKFSAFGTKSRRNIP 426
           PK  TI +P K +   +FGT  R+ +P
Sbjct: 130 PKAGTISHPHKSQSDQSFGTPGRKGLP 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,257,006
Number of Sequences: 53049
Number of extensions: 637589
Number of successful extensions: 1992
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1992
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)