Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c08
         (377 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0IFW8 Cluster: Putative uncharacterized protein; n=1; ...    35   0.44 
UniRef50_UPI00015B513B Cluster: PREDICTED: similar to GA17864-PA...    33   2.3  
UniRef50_UPI0000DB7034 Cluster: PREDICTED: similar to CG14881-PA...    33   2.3  
UniRef50_Q5CTB5 Cluster: WD repeat protein; n=3; Eukaryota|Rep: ...    33   2.3  
UniRef50_A4HIG6 Cluster: Zinc-finger protein, conserved; n=1; Le...    33   2.3  
UniRef50_UPI0000E4921B Cluster: PREDICTED: hypothetical protein;...    32   4.1  
UniRef50_A3UGC3 Cluster: Putative methyl-accepting chemotaxis pr...    31   9.4  
UniRef50_Q4N027 Cluster: Putative uncharacterized protein; n=1; ...    31   9.4  

>UniRef50_Q0IFW8 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 201

 Score = 35.1 bits (77), Expect = 0.44
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = +2

Query: 2   CKILCXAXXTATKAKGPEILCSRL-KDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENS 178
           C   C           P ++C  + +D    +   FY+ C   W  +N++A    CC+N 
Sbjct: 98  CSNRCLEAILKHLPNSPALICGTIDRDCFRERAYLFYQNCAPRWVNSNLSAGREFCCQND 157

Query: 179 QVKVCSSVVTL 211
           +   C+ +  +
Sbjct: 158 RPVRCAKMAAV 168


>UniRef50_UPI00015B513B Cluster: PREDICTED: similar to GA17864-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA17864-PA - Nasonia vitripennis
          Length = 160

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
 Frame = +2

Query: 2   CKILCXAXXTATKAKGPEILCSRL-KDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENS 178
           C   C           P ILC  + +D ++ +   F K C   W   N++A    CC++ 
Sbjct: 92  CTNKCLDVIVKHLPNSPSILCGSIDRDCHKERAYLFIKNCKDEWINTNLSAGREYCCKDG 151

Query: 179 QVKVC 193
               C
Sbjct: 152 LPYKC 156


>UniRef50_UPI0000DB7034 Cluster: PREDICTED: similar to CG14881-PA,
           isoform A; n=3; Coelomata|Rep: PREDICTED: similar to
           CG14881-PA, isoform A - Apis mellifera
          Length = 341

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 53  EILCSRL-KDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVC 193
           +ILCS + +D  + K   F K C   W   N++A    CC++ +   C
Sbjct: 291 KILCSSIERDCYKEKAYLFIKNCKSGWINTNLSAGREYCCKDGRPYKC 338


>UniRef50_Q5CTB5 Cluster: WD repeat protein; n=3; Eukaryota|Rep: WD
            repeat protein - Cryptosporidium parvum Iowa II
          Length = 3948

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 340  SNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLC 233
            +N +IN  T + +Y+  RLS I K   +N+L+G LC
Sbjct: 3638 NNGIINQETKKSVYD--RLSCIVKKEELNQLFGDLC 3671


>UniRef50_A4HIG6 Cluster: Zinc-finger protein, conserved; n=1;
           Leishmania braziliensis|Rep: Zinc-finger protein,
           conserved - Leishmania braziliensis
          Length = 1177

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 115 VRQTMELRKHDCRSPTLLRKFPSESLFVGGNTKINSATGSK 237
           V++  E  K   R+PTL  + PS+SLFVG    +    G K
Sbjct: 206 VQKQQEHHKATTRAPTLAHQTPSDSLFVGNTPPVLHEAGRK 246


>UniRef50_UPI0000E4921B Cluster: PREDICTED: hypothetical protein;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 1782

 Score = 31.9 bits (69), Expect = 4.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 110 KTCDKPWSYANMTAEAPLCCENSQVKVCSSVVTLKST 220
           K  D P    ++TAEA L   +S++ VCSS  TL S+
Sbjct: 547 KASDSPLKMQSVTAEALLTSSSSELDVCSSEETLTSS 583


>UniRef50_A3UGC3 Cluster: Putative methyl-accepting chemotaxis
           protein; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
           Putative methyl-accepting chemotaxis protein -
           Oceanicaulis alexandrii HTCC2633
          Length = 566

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +2

Query: 41  AKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVCSSVVTLKST 220
           AK  + LC++LKD   L+ S   K   +    A   AE     EN+  KV S+V+     
Sbjct: 255 AKAVQDLCAKLKDAEALRQSELDKQTGEA-ERAERLAEEISKFENAAQKVLSAVIEAARE 313

Query: 221 VQPEAKTT 244
           V   A+ T
Sbjct: 314 VHASAEAT 321


>UniRef50_Q4N027 Cluster: Putative uncharacterized protein; n=1;
            Theileria parva|Rep: Putative uncharacterized protein -
            Theileria parva
          Length = 1125

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 328  INANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 221
            IN+ T+R IYN+    FI +NN   +L  +L  + H
Sbjct: 1019 INSQTLRVIYNYRTWKFIIQNNLKTELLSNLSSQTH 1054


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,747,567
Number of Sequences: 1657284
Number of extensions: 4231502
Number of successful extensions: 11173
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11172
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)