Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b24
(540 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 4e-40
SB_14302| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_42971| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_22884| Best HMM Match : Tctex-1 (HMM E-Value=9.4e-26) 42 4e-04
SB_36748| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_1925| Best HMM Match : Tctex-1 (HMM E-Value=8.7e-12) 40 0.002
SB_4931| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-09) 39 0.003
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 38 0.007
SB_58523| Best HMM Match : Tctex-1 (HMM E-Value=1.8e-11) 37 0.012
SB_14303| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_44342| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-05) 36 0.028
SB_44340| Best HMM Match : Tctex-1 (HMM E-Value=5.6e-05) 33 0.11
SB_12931| Best HMM Match : Tctex-1 (HMM E-Value=0.00045) 33 0.15
SB_59030| Best HMM Match : Tctex-1 (HMM E-Value=8.2e-12) 33 0.20
SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08) 30 1.4
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 29 2.4
SB_9151| Best HMM Match : WAP (HMM E-Value=0.045) 29 3.2
SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_58511| Best HMM Match : 7tm_1 (HMM E-Value=7.8e-22) 27 7.4
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 7.4
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 27 9.8
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 161 bits (390), Expect = 4e-40
Identities = 68/94 (72%), Positives = 80/94 (85%)
Frame = +1
Query: 124 QNQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKYVVTCT 303
+ F+VD+VS IIKE IE +IGG AYQHN VNQWTS VVE CL QLTKL KP+KY+VTC
Sbjct: 9 ETSFVVDEVSNIIKEGIEGAIGGNAYQHNKVNQWTSNVVEQCLNQLTKLGKPFKYIVTCV 68
Query: 304 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTM 405
I+QKNGAGLHTSSSCYWDNTTDGSCT++ +K++
Sbjct: 69 IMQKNGAGLHTSSSCYWDNTTDGSCTIKQPDKSL 102
>SB_14302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 91 LIQQTYQHGVFQNQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKL 270
+I Q + G + I++++SK+I ++ + G +Y+ ++ + E+ ++ L
Sbjct: 11 VIAQDIELGKRFSASIIENISKVI---LQERLEGMSYEATECSKLAREMSETIRNEVKAL 67
Query: 271 Q-KPYKYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
YK VV +I GLH SS C W TDGS T + N +++ + +V
Sbjct: 68 SWDRYKIVVMVSIGSLKDQGLHISSRCLWYPNTDGSATAVYRNTSLFAVATV 119
>SB_42971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +3
Query: 174 RKFNWRHCLSTQQCQPMDFSSC*VMSGAVD*VTKTIQICSDLHNTAEEWCRTAYKFFLLL 353
R++ W+ C+STQQ QPMD MS D KT+Q+ L AE+ R+ Y +LL
Sbjct: 133 RRYRWK-CVSTQQSQPMDLKCRRAMSKPTDQAGKTVQVHRYLRYHAEKRSRSTYFELVLL 191
Query: 354 G 356
G
Sbjct: 192 G 192
>SB_22884| Best HMM Match : Tctex-1 (HMM E-Value=9.4e-26)
Length = 439
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +1
Query: 91 LIQQTYQHGVFQNQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKL 270
+++ TYQ + +F ++ I+KE + ++ Y N Q T + E+ ++ +L
Sbjct: 61 VMENTYQTTPTK-KFPEGNIRNIMKEVLIENLADVNYDPNTCRQLTKTISETLKNRVKEL 119
Query: 271 Q-KPYKYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
+ YK + I Q + S C WD D T ++N +++ + +V
Sbjct: 120 SVQRYKIICLVHIGQLGKQAMRIGSRCLWDANFDTYTTYEFKNGSLFGVATV 171
>SB_36748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Frame = +1
Query: 88 ILIQQTYQHGVFQNQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTK 267
+L+ TY+ V + D + +I++ + + T Y+ N + + + L L
Sbjct: 213 VLVSNTYKM-VPDKKIACDKIRDVIRKHLR-FLETTEYEVNRCREISKLLSNRILKDLKL 270
Query: 268 LQKP-YKYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
L P YK+V + I Q G + +S C WD +D + +E+ +++ + +V
Sbjct: 271 LGFPRYKFVSSVCIGQMLGQSVRIASRCVWDTESDNFVSESYESLSLFAVGTV 323
>SB_1925| Best HMM Match : Tctex-1 (HMM E-Value=8.7e-12)
Length = 349
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +1
Query: 130 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKP-YKYVVTCTI 306
QF V +V +I++E E I Y + + ++ LQ P YK + +
Sbjct: 173 QFEVTEVQRIMREVFEEEIKDLEYDAEKCAPLCKRLSDVVKARVKGLQYPRYKIIALVYV 232
Query: 307 LQKNGAGLHTSSSCYWDNTTDGSCTVRWE 393
QK G + +S C WD D +E
Sbjct: 233 GQKEGQDVRITSRCVWDTRFDNCAQYAYE 261
>SB_4931| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-09)
Length = 259
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +1
Query: 148 VSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKP-YKYVVTCTILQKNGA 324
+ +IK+ +E + Y+ N + ++ +L+ P YKYV + + N
Sbjct: 161 IEPLIKDTLEEHLDNQTYEPNFCRLAAIKITNQLKERMKRLRYPRYKYVCHAMLGEINNQ 220
Query: 325 GLHTSSSCYWDNTTDGSCTVRWENKTMYCI 414
+ S C WD D + N ++Y I
Sbjct: 221 DVRAVSRCAWDTCVDSFAQYEYRNCSLYGI 250
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 148 VSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQ-KPYKYVVTCTILQKNGA 324
V +I+K+A+ ++ +Y+ N+ + + L ++ +L + YK V +I KN
Sbjct: 754 VRQIVKDALV-TLDSHSYEPNDSALLAKLMSKRILDEVKQLNVERYKLVCLVSIGSKNRQ 812
Query: 325 GLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
G+ +S C W+ D + + T Y I +V
Sbjct: 813 GMRIASRCLWNTEYDTCISETMDKHTFYAIATV 845
>SB_58523| Best HMM Match : Tctex-1 (HMM E-Value=1.8e-11)
Length = 541
Score = 36.7 bits (81), Expect = 0.012
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 133 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKP-YKYVVTCTIL 309
F V V +II+ + ++ Y + ++ S ++ L+ P YK VV +
Sbjct: 438 FPVAKVEEIIRGVLSETLSSVEYNVTKAKEKCKSISNSIKERVKALELPRYKLVVLAHVG 497
Query: 310 QKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
G + +S C W + D T + N +++ +V
Sbjct: 498 GNQGQEIKVTSRCVWSHEFDNYATASYCNSSVFAQATV 535
>SB_14303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/95 (20%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Frame = +1
Query: 142 DDVSKIIKEAIENSIGG-TAYQHNNVNQWT---SAVVESCLGQLTKLQKPYKYVVTCTIL 309
+++ ++I++ + + + T Y+H + S ++++C+ +L +P K +V I
Sbjct: 72 EEMGRVIRDVLSSYLKQFTEYKHEMFERLCTLLSDLIKTCVTELC--DEPCKVIVNVFIG 129
Query: 310 QKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCI 414
G G+ ++ C W D T ++N+T++ +
Sbjct: 130 AIKGQGIDAATQCTWTPDCDKFATASFQNETLFAV 164
>SB_44342| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-05)
Length = 608
Score = 35.5 bits (78), Expect = 0.028
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 130 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKP-YKYVVTCTI 306
+F D V+KII + +N + Y + + + +L P Y+ V TCTI
Sbjct: 477 KFDRDKVTKIIVDVFKNKLANMHYNAKDCQAMAKELASVIREKCVELHLPGYRLVCTCTI 536
Query: 307 LQKNGAGLHTSSSCYWD 357
++ S C WD
Sbjct: 537 TKRLKPAPAIESGCLWD 553
>SB_44340| Best HMM Match : Tctex-1 (HMM E-Value=5.6e-05)
Length = 369
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/98 (19%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +1
Query: 121 FQNQFIVDDVSK-IIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKYVVT 297
F++ F ++ + II E +++ + Y + S + + G++ K +V+
Sbjct: 82 FEDNFESQELLRQIISEELDSVLRDCDYDSERSVKQGSVISQRVEGRVKSAVKSGTKIVS 141
Query: 298 CTILQK-NGAGLHTSSSCYWDNTTDGSCTVRWENKTMY 408
+ + G+ +S C WD+ +D T + NK+++
Sbjct: 142 VVYIGEIRDQGIEITSQCLWDSKSDNFATASFRNKSLF 179
>SB_12931| Best HMM Match : Tctex-1 (HMM E-Value=0.00045)
Length = 247
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 148 VSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKP-YKYVVTCTILQKNGA 324
+ +I+KE ++ G Y+ + + + + +L L P +K V TC ++
Sbjct: 88 IFEILKEVLDQGFEGLTYEQRDTARLCHEIARTLKERLALLHIPEFKLVCTCYATRRAKP 147
Query: 325 GLHTSSSCYWD 357
+ S C WD
Sbjct: 148 CMQIESGCAWD 158
>SB_59030| Best HMM Match : Tctex-1 (HMM E-Value=8.2e-12)
Length = 178
Score = 32.7 bits (71), Expect = 0.20
Identities = 18/99 (18%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 133 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKL--QKPYKYVVTCTI 306
F D+ ++ E +++++ Y + + +S ++ L K Y+++ +I
Sbjct: 74 FCSHDIQCLMDEILDDTLSSEHYSAESSRVLCLGLADSIKSRVKGLGMAKRYRFICHVSI 133
Query: 307 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
+G GL +S W+ D T + N +++ + +V
Sbjct: 134 GSCSGQGLLIASKSVWNEKRDSFVTSTFRNASLFAVATV 172
>SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08)
Length = 556
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +1
Query: 127 NQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQ-KPYKYVVTCT 303
N+F V II+EA + + +Y+ T+ + E ++ L YK +
Sbjct: 385 NRFSHKKVKDIIEEAFQEHLNEHSYEAEFCKHMTTKLSELIKQRVKHLGFTRYKLICIVY 444
Query: 304 ILQKNGAGLHTSSSCYW----DNTTDGS 375
I Q G+ S C W DN +GS
Sbjct: 445 IGQVMNQGMRIGSRCLWNTNFDNVVEGS 472
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +1
Query: 280 YKYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
YK V I + N + S C WD D + N T++ + ++
Sbjct: 19 YKIVCLTNIGKVNDQTIRIGSRCCWDQNLDNYAEAVYTNSTLFAVTAI 66
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 361 CYPNNKKNLYAVLHHSSAVL-CRSLHICMVF 272
C+P+ K NLY V+ + AVL C +CM F
Sbjct: 233 CWPSIKGNLYTVIGITGAVLICIIFTMCMAF 263
>SB_9151| Best HMM Match : WAP (HMM E-Value=0.045)
Length = 1865
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 268 LQKPYKYVVTCTILQKNGAGLHTSSSCYWDNTTDGS 375
L +P+ T +L K+ GL T++S W+ TDGS
Sbjct: 500 LNRPFGSSTTMRLLTKD-VGLQTTASQSWNGITDGS 534
>SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 360 HY*WLMH-GPLGE*NYVLHCLSLWAWHITWIYYIHLL 467
H WL H L NY+ H + W +H++W+ +++ +
Sbjct: 119 HVIWLFHVSLLCHVNYMYHVI--WLFHVSWLCHVNYM 153
>SB_58511| Best HMM Match : 7tm_1 (HMM E-Value=7.8e-22)
Length = 327
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 220 QWTSAVVESCLGQLTKLQKPYKYVVTCTILQKNGAGLHTSSSCYWDNTTDGSC 378
++TSA+V L T ++K +K + L+ + SS C +N+T GSC
Sbjct: 276 RFTSALVNPLL--YTYIKKDFKRAMNLPFLRFDQDDRIQSSGCAQNNSTAGSC 326
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 184 IGGTAYQHNNVNQWTSAVVESCLGQLTKL 270
+GG A +HNN NQW ++ LG++TK+
Sbjct: 6396 MGGWAVRHNNHNQW----LQVDLGRVTKV 6420
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 286 YVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCI 414
Y CT+ K H ++CY + G+C VR ++ + CI
Sbjct: 978 YTCRCTVGFKGTRCEHAMNTCYSNPCIHGNCLVR-DDSSFECI 1019
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,444,245
Number of Sequences: 59808
Number of extensions: 309455
Number of successful extensions: 719
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1227799733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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