Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b17
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   2.1  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.6  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +1

Query: 136 TGLQESIWK*NIKLSTNKSIRLQKKLYTRRLTQRN*FQRHQER 264
           T  Q  IW  N ++   K +R  K++  +   +R   +RH+++
Sbjct: 46  TERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQ 88


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +1

Query: 136 TGLQESIWK*NIKLSTNKSIRLQKKLYTRRLTQRN*FQRHQER 264
           T  Q  IW  N ++   K +R  K++  +   +R   +RH+++
Sbjct: 197 TERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQ 239


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +1

Query: 136 TGLQESIWK*NIKLSTNKSIRLQKKLYTRRLTQRN*FQRHQER 264
           T  Q  IW  N ++   K +R  K++  +   +R   +RH+++
Sbjct: 256 TERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQ 298


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 566  GFIWTIVIMNIRKLRVCKEYKL 631
            G IW + + + + L  C+EY L
Sbjct: 2160 GMIWALDLDDFKNLCGCEEYPL 2181


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 417 VNKNINLPQDVYKSVLNLFTII 482
           +N+NI++P   Y+ +L + T+I
Sbjct: 641 INENISMPYIGYQIILMIGTVI 662


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 322 MQNRNADISKKKTLLHLLCIVWAKSLGN 405
           M+N  + I+ KK  + +  ++   +LGN
Sbjct: 153 MRNYGSSINMKKRFVVMTSVIMTLALGN 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,301
Number of Sequences: 336
Number of extensions: 3500
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)