Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b14
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16818| Best HMM Match : Prefoldin (HMM E-Value=0.00051) 80 2e-15
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 33 0.27
SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44) 31 1.1
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 31 1.1
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_57077| Best HMM Match : RhoGEF (HMM E-Value=2.1e-07) 30 1.9
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 30 2.5
SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7) 29 4.4
SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069) 29 5.8
SB_7934| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_2066| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 7.7
>SB_16818| Best HMM Match : Prefoldin (HMM E-Value=0.00051)
Length = 162
Score = 80.2 bits (189), Expect = 2e-15
Identities = 53/155 (34%), Positives = 89/155 (57%)
Frame = +2
Query: 170 KSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQI 349
K + GIPEA F+D+V +FM S +++ + V++S DE+ RKYK ME L TK+++L+ Q+
Sbjct: 16 KKHRGIPEAGFLDDVGKFM-STSSSDSAESVIRSFDEQLRKYKFMEINLLTKKKKLQGQV 74
Query: 350 PDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAE 529
PDL ++E+++ L+ +K V ++ + + A +L+ +L+ A
Sbjct: 75 PDLKSSLEMVKLLQAKKANVMLEYSIDE-------------------AEELLQKNLKTAI 115
Query: 530 KLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNM 634
K +L ++E DL FLRDQ TTTEV++
Sbjct: 116 K-----------SLEELEDDLGFLRDQYTTTEVSI 139
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 33.1 bits (72), Expect = 0.27
Identities = 30/137 (21%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Frame = +2
Query: 203 VDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIE 382
++N+++ +S +N E + ++ KS D K ME +RR+ + D+ I
Sbjct: 1522 IENMEKANRS-VN-EKILIIEKSNDRDRENAKRMEEENINLKRRVAEM--DINNRIN--- 1574
Query: 383 KLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAE-KLLTTNMETA 559
E++ E++++ + + + P + + + M+E S +D E ++L ++ET
Sbjct: 1575 --SEKENELQSKLSQAHEQIINLENRPQLESAISMVSESMVESSGDDMETQILRQDLETL 1632
Query: 560 QENLNQVEHDLDFLRDQ 610
Q +++E L+DQ
Sbjct: 1633 QSKYDKLERQNKLLQDQ 1649
>SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44)
Length = 534
Score = 31.1 bits (67), Expect = 1.1
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Frame = +2
Query: 242 AEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQF 421
AE VD V ++++ K ++ L +++RL+ + D K KEE+E Q
Sbjct: 372 AEEVDRVKMEIEQE--KAELQLSALENEKKRLKADLDD---------SYKRHKEEMEIQQ 420
Query: 422 LLSDQVFVK-ANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQEN 568
L Q F V + + +LE +++DA L T N E QEN
Sbjct: 421 LQHFQTFRNYREVFEDQKSAIEQRYRTLLEEAIQDAVFLSTRNQELLQEN 470
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/98 (20%), Positives = 41/98 (41%)
Frame = +2
Query: 323 KRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVM 502
+ +++ ++ D+ + I ++EK +E EE + F+ + + + L + +
Sbjct: 206 RAKKVSPKVTDIEQAIALVEKAQEALEENKHATRRDLDAFIDKQISALEKMRADLKSEI- 264
Query: 503 LEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCT 616
+ + + EK LT E L LDF CT
Sbjct: 265 -DSACQKQEKQLTAERENLSVRLASARSSLDFAERLCT 301
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/60 (28%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Frame = +2
Query: 260 VLKSLDEKHRKY----KVMEYTLATKRRRLRQQIPDLA-RTIEVIEKLKEQKEEVETQFL 424
+L+ ++EK RK ++ E K+ +L QQ +L + ++ ++++KE+K+E+E + L
Sbjct: 287 MLRQIEEKKRKLEEEERIKEEVEKQKKIKLEQQEKELRDKLLKNLKEMKERKQELERELL 346
>SB_57077| Best HMM Match : RhoGEF (HMM E-Value=2.1e-07)
Length = 658
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +2
Query: 152 VEPSNPKS-YSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKV-MEYTLATK 325
++ NPK+ +SG E+ F+ + ++ P+ +LK LDE +YKV +E +A +
Sbjct: 127 LDARNPKNQHSGTLESYFIKPIQRILRYPLLLR---TILKLLDETSEEYKVLLEAVVAIE 183
Query: 326 RRRLRQQIPDLARTIE----VIEKLKEQKEEVETQFLLSDQV 439
++ I ++ R E + +L E ++ E + D++
Sbjct: 184 --KVATHINEMQRITERFAPIFNQLVEDYDDCEVSDVTIDRL 223
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Frame = +2
Query: 278 EKHRKYKVMEYTLATKRRRLRQQIPDLARTIEV----IEKLKEQKEEVETQF----LLSD 433
++ KY+ YT ++ L QQ +L +EV E+L+ ++ + L+
Sbjct: 4204 QERDKYQTANYTYNREKEELAQQNAELKMKLEVKVNECEELERTTSDLSKKLSQAELIVQ 4263
Query: 434 QVFVKANVPPTKSVCLWLGANV-MLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQ 610
Q+ ++++ P +++ L L+ L+ +K L + A+E L + +L+ L+ Q
Sbjct: 4264 QLSIESDAPAAQTLVQQLQQEKDDLKSKLDQLKKTLQKSEANAEEALQRRTDELEKLQSQ 4323
>SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 215 DEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTL-ATKRRRLRQQIPDLARTIEVIEKLK 391
D ++S + + + + KHR K + + A +++ +++P + +E+ EKLK
Sbjct: 234 DSILQSKVEKDQLLMDTLETIAKHRADKSRQAAVRAEQKKASEKKLPKDPKLLELQEKLK 293
Query: 392 EQKEE--VETQFL 424
+KEE +ETQ L
Sbjct: 294 AKKEERRIETQRL 306
>SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7)
Length = 412
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Frame = +2
Query: 158 PSNPKSYSGIPEAEFVDN-----VDEFMKSPINAEGVD-------VVLKSLDEKHRKYKV 301
PS+ K+ S + E E + N V+EF+K D V+L+ + + + +V
Sbjct: 248 PSSTKTTSDLEEGEILKNEDRKWVEEFLKGIAPTSNTDQHATETKVMLQETERRLGEKEV 307
Query: 302 MEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVE 412
E T KRR+ +Q+ + +EK +K ++
Sbjct: 308 QELTEKWKRRKRKQEWLKRRKIKRTLEKQAAEKRRLQ 344
>SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069)
Length = 246
Score = 28.7 bits (61), Expect = 5.8
Identities = 26/126 (20%), Positives = 55/126 (43%)
Frame = +2
Query: 245 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 424
E ++ + +SL+ H + ++ +L L + + + E +E L E E ++
Sbjct: 89 ESLETLDESLETLHESLETLQESLEKLLESLHESLDESLD--ESLETLDESLETLDESLE 146
Query: 425 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLR 604
D+ + +S+ + L+ SLE ++ L ++ET E+L ++ LD
Sbjct: 147 TLDESLETLDESLDESLET---LDESLDESLETLDESLDESLETLDESLETLDESLDESL 203
Query: 605 DQCTTT 622
D+ T
Sbjct: 204 DESLET 209
>SB_7934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/108 (22%), Positives = 48/108 (44%)
Frame = -3
Query: 528 SASSRLYSNITLAPSHKHTDFVGGTLAFTNT*SLRRNCVSTSSFCSFNFSITSIVRAKSG 349
S S+ +SN T+A S+ + GT+ + + N S+C+ S ++ A+S
Sbjct: 1 SYSTSTHSNGTVAQSYSTSTHSNGTVTQSYSTITHSNGTVAQSYCTSTHSHGTV--AQSY 58
Query: 348 ICCRNRLLLVANVYSITLYLRCFSSRLFKTTSTPSALIGDFINSSTLS 205
+ VA YS + + C ++ + T++ + ++ST S
Sbjct: 59 STSTHSHGTVAQSYSPSTHFHCTVAQSYSTSTHSHGTVAQSYSTSTHS 106
>SB_2066| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 1256
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +2
Query: 260 VLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQV 439
+L+ + RK K +E L + + + D IEV+ K EEV + L++
Sbjct: 384 LLEDVSSNKRKMKELEDNLLYRLTSTQGSLVDDESLIEVLSVTKTTAEEVSQKLLVAADT 443
Query: 440 FVKAN 454
+K N
Sbjct: 444 EIKIN 448
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,114,847
Number of Sequences: 59808
Number of extensions: 368648
Number of successful extensions: 1085
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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